Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17570

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,854,051	+				-1.1
3,854,052	-				-0.4
3,854,138	+		LRK53_RS17565	0.26	-1.3
3,854,138	+		LRK53_RS17565	0.26	+0.5
3,854,138	+		LRK53_RS17565	0.26	+0.2
3,854,138	+		LRK53_RS17565	0.26	-0.5
3,854,138	+		LRK53_RS17565	0.26	+2.3
3,854,139	-		LRK53_RS17565	0.27	-2.2
3,854,139	-		LRK53_RS17565	0.27	+0.9
3,854,139	-		LRK53_RS17565	0.27	-0.7
3,854,139	-		LRK53_RS17565	0.27	-1.2
3,854,139	-		LRK53_RS17565	0.27	-0.7
3,854,139	-		LRK53_RS17565	0.27	-2.3
3,854,139	-		LRK53_RS17565	0.27	+0.4
3,854,139	-		LRK53_RS17565	0.27	-0.2
3,854,139	-		LRK53_RS17565	0.27	-1.3
3,854,139	-		LRK53_RS17565	0.27	-1.5
3,854,139	-		LRK53_RS17565	0.27	+1.0
3,854,139	-		LRK53_RS17565	0.27	-0.9
3,854,139	-		LRK53_RS17565	0.27	-2.1
3,854,148	-		LRK53_RS17565	0.28	-1.2
3,854,255	+		LRK53_RS17565	0.50	-0.9
3,854,255	+		LRK53_RS17565	0.50	+0.5
3,854,255	+		LRK53_RS17565	0.50	+0.5
3,854,255	+		LRK53_RS17565	0.50	+0.2
3,854,255	+		LRK53_RS17565	0.50	-0.2
3,854,256	-		LRK53_RS17565	0.50	-1.6
3,854,256	-		LRK53_RS17565	0.50	-0.8
3,854,256	-		LRK53_RS17565	0.50	+1.1
3,854,256	-		LRK53_RS17565	0.50	-0.5
3,854,580	+				+1.9
3,854,580	+				-1.3
3,854,580	+				+1.0
3,854,581	-				-1.6
3,854,581	-				-0.0
3,854,581	-				+1.4
3,854,581	-				-1.8
3,854,581	-				+1.8
3,854,993	-		LRK53_RS17570	0.59	-0.5
3,854,993	-		LRK53_RS17570	0.59	+1.2
3,854,993	-		LRK53_RS17570	0.59	-0.8
3,855,010	+		LRK53_RS17570	0.61	+0.9
3,855,010	+		LRK53_RS17570	0.61	+1.2
3,855,072	+		LRK53_RS17570	0.70	-0.0
3,855,588	+		LRK53_RS17575	0.13	+0.2
3,855,588	+		LRK53_RS17575	0.13	-2.0
3,855,588	+		LRK53_RS17575	0.13	-1.4
3,855,589	-		LRK53_RS17575	0.13	-0.2
3,855,589	-		LRK53_RS17575	0.13	+0.8
3,855,589	-		LRK53_RS17575	0.13	-0.8
3,855,589	-		LRK53_RS17575	0.13	-0.2
3,855,601	+		LRK53_RS17575	0.16	+0.2
3,855,667	+		LRK53_RS17575	0.31	-0.5
3,855,668	-		LRK53_RS17575	0.31	-0.8
3,855,668	-		LRK53_RS17575	0.31	-0.7
3,855,670	+		LRK53_RS17575	0.31	+0.8
3,855,670	+		LRK53_RS17575	0.31	-1.5
3,855,670	+		LRK53_RS17575	0.31	-1.9
3,855,671	-		LRK53_RS17575	0.32	-2.2
3,855,671	-		LRK53_RS17575	0.32	+0.2
3,855,682	+		LRK53_RS17575	0.34	-0.9
3,855,682	+		LRK53_RS17575	0.34	-2.2
3,855,682	+		LRK53_RS17575	0.34	-1.4
3,855,682	+		LRK53_RS17575	0.34	-0.8
3,855,682	+		LRK53_RS17575	0.34	+0.1
3,855,682	+		LRK53_RS17575	0.34	+0.3
3,855,682	+		LRK53_RS17575	0.34	-1.6
3,855,682	+		LRK53_RS17575	0.34	+0.2
3,855,682	+		LRK53_RS17575	0.34	-0.0
3,855,682	+		LRK53_RS17575	0.34	-1.1
3,855,683	-		LRK53_RS17575	0.34	-0.8
3,855,683	-		LRK53_RS17575	0.34	-2.9
3,855,683	-		LRK53_RS17575	0.34	+1.0
3,855,683	-		LRK53_RS17575	0.34	-0.8
3,855,683	-		LRK53_RS17575	0.34	-1.3
3,855,683	-		LRK53_RS17575	0.34	-0.7
3,855,683	-		LRK53_RS17575	0.34	-2.5
3,856,091	+				+0.6
3,856,091	+				-0.8
3,856,091	+				-1.0
3,856,091	+				-1.0
3,856,091	+				-0.2
3,856,091	+				-0.4
3,856,091	+				+1.5
3,856,091	+				+0.2
3,856,091	+				-1.5
3,856,092	-				-1.7
3,856,092	-				-0.2
3,856,092	-				-0.1
3,856,092	-				+1.3
3,856,092	-				+0.7
3,856,092	-				-0.3
3,856,092	-				+0.9
3,856,092	-				-0.2
3,856,112	+				+0.7
3,856,112	+				-2.4
3,856,112	+				-1.5
3,856,112	+				+1.3
3,856,112	+				-1.5
3,856,112	+				-0.5
3,856,112	+				-1.2
3,856,113	-				-0.9
3,856,113	-				-1.8
3,856,113	-				-1.6
3,856,113	-				-1.9
3,856,193	+				+2.0
3,856,193	+				-0.7
3,856,193	+				-0.9
3,856,193	+				-0.8
3,856,193	+				-0.4
3,856,193	+				-2.3
3,856,193	+				-0.7
3,856,193	+				-0.0
3,856,193	+				-2.9
3,856,193	+				+0.8
3,856,193	+				+0.1
3,856,193	+				-1.8
3,856,193	+				-1.1
3,856,193	+				-0.5
3,856,193	+				+0.3
3,856,193	+				+0.2
3,856,193	+				-0.5
3,856,193	+				-0.3
3,856,193	+				-0.5
3,856,193	+				-1.3
3,856,193	+				+0.5
3,856,194	-				+0.2
3,856,194	-				-1.4
3,856,194	-				+0.7
3,856,194	-				-2.5
3,856,194	-				-2.2
3,856,194	-				+0.8
3,856,194	-				-0.3
3,856,194	-				+0.1
3,856,194	-				-0.7
3,856,194	-				+0.1
3,856,194	-				-1.4
3,856,194	-				-1.7
3,856,194	-				-1.7
3,856,194	-				-0.8
3,856,194	-				-1.5
3,856,194	-				-0.6
3,856,194	-				-0.7
3,856,194	-				-0.5
3,856,194	-				+2.2