Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17405

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,819,277	+		LRK53_RS17400	0.40	+0.0
3,819,278	-		LRK53_RS17400	0.40	+0.6
3,819,289	+		LRK53_RS17400	0.41	-0.0
3,819,289	+		LRK53_RS17400	0.41	+0.8
3,819,289	+		LRK53_RS17400	0.41	-0.0
3,819,289	+		LRK53_RS17400	0.41	-0.2
3,819,290	-		LRK53_RS17400	0.42	-1.2
3,819,290	-		LRK53_RS17400	0.42	-0.0
3,819,418	+		LRK53_RS17400	0.55	-0.0
3,819,418	+		LRK53_RS17400	0.55	-0.0
3,819,418	+		LRK53_RS17400	0.55	-0.0
3,819,419	-		LRK53_RS17400	0.55	-1.7
3,819,419	-		LRK53_RS17400	0.55	-1.6
3,819,419	-		LRK53_RS17400	0.55	+1.4
3,819,419	-		LRK53_RS17400	0.55	-0.1
3,819,748	+		LRK53_RS17400	0.88	-0.4
3,819,748	+		LRK53_RS17400	0.88	+0.7
3,819,748	+		LRK53_RS17400	0.88	-2.0
3,819,748	+		LRK53_RS17400	0.88	-0.5
3,819,748	+		LRK53_RS17400	0.88	-0.2
3,819,748	+		LRK53_RS17400	0.88	-1.8
3,819,749	-		LRK53_RS17400	0.88	+0.4
3,819,749	-		LRK53_RS17400	0.88	-1.4
3,819,749	-		LRK53_RS17400	0.88	-1.1
3,819,749	-		LRK53_RS17400	0.88	+0.7
3,819,749	-		LRK53_RS17400	0.88	-0.8
3,819,749	-		LRK53_RS17400	0.88	-2.4
3,819,749	-		LRK53_RS17400	0.88	-0.6
3,819,784	+				+0.9
3,819,784	+				-1.9
3,819,785	-				-2.1
3,819,903	+				+0.6
3,819,903	+				-1.0
3,819,903	+				-2.2
3,819,903	+				-0.6
3,819,903	+				-1.9
3,819,903	+				-0.2
3,819,903	+				-1.9
3,819,903	+				+0.4
3,819,903	+				-0.9
3,819,903	+				-0.9
3,819,903	+				-0.4
3,819,903	+				+1.0
3,819,903	+				-2.6
3,819,903	+				-0.4
3,819,903	+				-0.7
3,819,903	+				+1.0
3,819,903	+				-0.9
3,819,903	+				-0.7
3,819,903	+				-1.1
3,819,904	-				-2.5
3,819,904	-				-0.3
3,819,904	-				-0.9
3,819,904	-				-1.5
3,819,904	-				+0.4
3,819,904	-				-1.0
3,819,904	-				-0.8
3,819,904	-				-1.4
3,819,904	-				+0.8
3,819,904	-				+1.4
3,819,904	-				+0.6
3,819,904	-				-1.8
3,819,904	-				-0.8
3,819,904	-				-1.3
3,819,904	-				-1.0
3,819,904	-				-0.9
3,819,904	-				-0.4
3,819,904	-				-0.1
3,819,926	+				+1.4
3,819,927	-				-0.5
3,819,927	-				-1.1
3,819,946	+				-1.1
3,819,946	+				+0.4
3,819,946	+				-1.6
3,819,947	-				-1.6
3,819,947	-				-2.5
3,819,950	+				-0.4
3,819,950	+				-2.4
3,819,950	+				-0.4
3,819,950	+				+1.2
3,819,950	+				-2.1
3,819,950	+				+0.3
3,819,950	+				-1.9
3,819,950	+				+1.0
3,819,950	+				+1.2
3,819,950	+				+0.2
3,819,950	+				-1.2
3,819,950	+				-2.1
3,819,950	+				-0.0
3,819,950	+				-2.0
3,819,950	+				-1.0
3,819,950	+				+0.1
3,819,950	+				-0.9
3,819,950	+				+0.2
3,819,950	+				-1.3
3,819,950	+				-0.4
3,819,951	-				-0.0
3,819,951	-				-0.7
3,819,951	-				-0.7
3,819,951	-				-0.6
3,819,951	-				-0.8
3,819,951	-				-1.2
3,819,951	-				-0.1
3,819,951	-				-1.2
3,819,951	-				+0.2
3,819,951	-				+0.9
3,819,951	-				-1.1
3,819,951	-				+0.4
3,819,951	-				-1.6
3,819,951	-				-1.3
3,819,951	-				-0.0
3,819,951	-				-0.7
3,819,951	-				-0.7
3,819,951	-				-0.4
3,819,951	-				-0.9
3,819,984	+				-2.5
3,819,984	+				-0.3
3,819,985	-				-2.4
3,820,100	+				-1.6
3,820,100	+				-2.3
3,820,100	+				+1.1
3,820,101	-				-0.2
3,820,101	-				-0.7
3,820,101	-				-0.5
3,820,101	-				-0.9
3,820,101	-				+0.8
3,820,201	+				-0.4
3,820,201	+				+0.7
3,820,201	+				+0.6
3,820,201	+				+0.4
3,820,201	+				+0.2
3,820,202	-				-1.0
3,820,405	+		LRK53_RS17405	0.20	-2.7
3,820,405	+		LRK53_RS17405	0.20	-0.5
3,820,405	+		LRK53_RS17405	0.20	+2.2
3,820,405	+		LRK53_RS17405	0.20	+0.4
3,820,406	-		LRK53_RS17405	0.20	-1.6
3,820,406	-		LRK53_RS17405	0.20	-0.8
3,820,406	-		LRK53_RS17405	0.20	-0.0
3,820,406	-		LRK53_RS17405	0.20	-0.3
3,820,406	-		LRK53_RS17405	0.20	+1.5
3,820,406	-		LRK53_RS17405	0.20	-1.0
3,820,406	-		LRK53_RS17405	0.20	-1.2
3,820,573	+		LRK53_RS17405	0.42	-0.3
3,820,573	+		LRK53_RS17405	0.42	-1.0
3,820,573	+		LRK53_RS17405	0.42	-1.2
3,820,573	+		LRK53_RS17405	0.42	-2.0
3,820,573	+		LRK53_RS17405	0.42	-0.8
3,820,573	+		LRK53_RS17405	0.42	-2.3
3,820,573	+		LRK53_RS17405	0.42	-0.2
3,820,573	+		LRK53_RS17405	0.42	+0.1
3,820,573	+		LRK53_RS17405	0.42	-0.9
3,820,573	+		LRK53_RS17405	0.42	-2.3
3,820,573	+		LRK53_RS17405	0.42	-1.5
3,820,573	+		LRK53_RS17405	0.42	-0.0
3,820,573	+		LRK53_RS17405	0.42	-2.6
3,820,573	+		LRK53_RS17405	0.42	-1.0
3,820,573	+		LRK53_RS17405	0.42	-1.6
3,820,573	+		LRK53_RS17405	0.42	-1.3
3,820,573	+		LRK53_RS17405	0.42	-0.2
3,820,573	+		LRK53_RS17405	0.42	-0.4
3,820,573	+		LRK53_RS17405	0.42	-0.6
3,820,574	-		LRK53_RS17405	0.42	-0.6
3,820,574	-		LRK53_RS17405	0.42	-2.1
3,820,574	-		LRK53_RS17405	0.42	-0.9
3,820,574	-		LRK53_RS17405	0.42	-1.1
3,820,574	-		LRK53_RS17405	0.42	+0.8
3,820,574	-		LRK53_RS17405	0.42	+0.2
3,820,574	-		LRK53_RS17405	0.42	-0.4
3,820,574	-		LRK53_RS17405	0.42	-0.6
3,820,574	-		LRK53_RS17405	0.42	+1.6
3,820,574	-		LRK53_RS17405	0.42	-0.3
3,820,574	-		LRK53_RS17405	0.42	-1.7
3,820,574	-		LRK53_RS17405	0.42	-2.3
3,820,574	-		LRK53_RS17405	0.42	-0.7
3,820,574	-		LRK53_RS17405	0.42	-1.6
3,820,574	-		LRK53_RS17405	0.42	+0.8
3,820,574	-		LRK53_RS17405	0.42	-0.9
3,820,574	-		LRK53_RS17405	0.42	-1.5
3,820,574	-		LRK53_RS17405	0.42	-2.2
3,820,574	-		LRK53_RS17405	0.42	-1.9
3,820,579	+		LRK53_RS17405	0.42	+0.1
3,820,579	+		LRK53_RS17405	0.42	-3.0
3,820,579	+		LRK53_RS17405	0.42	-0.2
3,820,579	+		LRK53_RS17405	0.42	-0.7
3,820,579	+		LRK53_RS17405	0.42	-1.4
3,820,579	+		LRK53_RS17405	0.42	-2.2
3,820,579	+		LRK53_RS17405	0.42	-1.0
3,820,579	+		LRK53_RS17405	0.42	-0.9
3,820,579	+		LRK53_RS17405	0.42	-0.6
3,820,579	+		LRK53_RS17405	0.42	-2.1
3,820,580	-		LRK53_RS17405	0.43	+0.8
3,820,580	-		LRK53_RS17405	0.43	+0.1
3,820,580	-		LRK53_RS17405	0.43	-1.6
3,820,580	-		LRK53_RS17405	0.43	+1.1
3,820,580	-		LRK53_RS17405	0.43	-2.4
3,820,580	-		LRK53_RS17405	0.43	-1.2
3,820,580	-		LRK53_RS17405	0.43	-0.0
3,820,580	-		LRK53_RS17405	0.43	+0.4
3,820,580	-		LRK53_RS17405	0.43	-0.0
3,820,642	+		LRK53_RS17405	0.51	+0.4
3,820,642	+		LRK53_RS17405	0.51	+0.2
3,820,642	+		LRK53_RS17405	0.51	-0.4
3,820,642	+		LRK53_RS17405	0.51	-0.1
3,820,642	+		LRK53_RS17405	0.51	-0.4
3,820,642	+		LRK53_RS17405	0.51	-1.1
3,820,642	+		LRK53_RS17405	0.51	-0.9
3,820,642	+		LRK53_RS17405	0.51	+2.3
3,820,642	+		LRK53_RS17405	0.51	-0.9
3,820,642	+		LRK53_RS17405	0.51	-0.8
3,820,642	+		LRK53_RS17405	0.51	-1.0
3,820,642	+		LRK53_RS17405	0.51	-0.0
3,820,643	-		LRK53_RS17405	0.51	-1.9
3,820,643	-		LRK53_RS17405	0.51	-0.4
3,820,643	-		LRK53_RS17405	0.51	-0.0
3,820,643	-		LRK53_RS17405	0.51	-0.8
3,820,643	-		LRK53_RS17405	0.51	-1.7
3,820,643	-		LRK53_RS17405	0.51	-0.9
3,820,643	-		LRK53_RS17405	0.51	-0.7
3,820,643	-		LRK53_RS17405	0.51	-1.2
3,820,643	-		LRK53_RS17405	0.51	+0.1
3,820,643	-		LRK53_RS17405	0.51	-2.3
3,820,643	-		LRK53_RS17405	0.51	-1.8
3,820,643	-		LRK53_RS17405	0.51	-0.9
3,820,643	-		LRK53_RS17405	0.51	+1.3
3,820,643	-		LRK53_RS17405	0.51	+0.2
3,820,643	-		LRK53_RS17405	0.51	-0.4
3,820,643	-		LRK53_RS17405	0.51	-0.8
3,820,643	-		LRK53_RS17405	0.51	-2.6
3,820,643	-		LRK53_RS17405	0.51	+1.9
3,820,703	-		LRK53_RS17405	0.58	-0.7
3,820,711	+		LRK53_RS17405	0.59	-0.2
3,820,712	-		LRK53_RS17405	0.60	-1.7
3,820,712	-		LRK53_RS17405	0.60	-2.0
3,820,712	-		LRK53_RS17405	0.60	+0.6
3,820,712	-		LRK53_RS17405	0.60	-0.5
3,820,712	-		LRK53_RS17405	0.60	-0.7
3,820,712	-		LRK53_RS17405	0.60	-1.2
3,820,741	+		LRK53_RS17405	0.63	-1.0
3,820,741	+		LRK53_RS17405	0.63	+0.9
3,820,741	+		LRK53_RS17405	0.63	-0.3
3,820,741	+		LRK53_RS17405	0.63	+1.1
3,820,741	+		LRK53_RS17405	0.63	+0.5
3,820,741	+		LRK53_RS17405	0.63	-1.3
3,820,741	+		LRK53_RS17405	0.63	+0.7
3,820,741	+		LRK53_RS17405	0.63	-1.7
3,820,742	-		LRK53_RS17405	0.63	+1.2
3,820,742	-		LRK53_RS17405	0.63	-1.7
3,820,742	-		LRK53_RS17405	0.63	-0.4
3,820,742	-		LRK53_RS17405	0.63	-0.9
3,820,742	-		LRK53_RS17405	0.63	-0.0
3,820,742	-		LRK53_RS17405	0.63	-0.2
3,820,742	-		LRK53_RS17405	0.63	-0.8
3,820,742	-		LRK53_RS17405	0.63	-0.4
3,820,742	-		LRK53_RS17405	0.63	-1.5
3,820,742	-		LRK53_RS17405	0.63	-0.1
3,820,742	-		LRK53_RS17405	0.63	-2.4
3,820,774	+		LRK53_RS17405	0.68	-1.0
3,820,774	+		LRK53_RS17405	0.68	-1.0
3,820,774	+		LRK53_RS17405	0.68	-0.0
3,820,774	+		LRK53_RS17405	0.68	-0.0
3,820,774	+		LRK53_RS17405	0.68	-0.6
3,820,774	+		LRK53_RS17405	0.68	-1.7
3,820,774	+		LRK53_RS17405	0.68	-0.4
3,820,774	+		LRK53_RS17405	0.68	-1.4
3,820,774	+		LRK53_RS17405	0.68	-1.8
3,820,774	+		LRK53_RS17405	0.68	-1.3
3,820,774	+		LRK53_RS17405	0.68	-1.0
3,820,774	+		LRK53_RS17405	0.68	+1.1
3,820,774	+		LRK53_RS17405	0.68	-3.3
3,820,774	+		LRK53_RS17405	0.68	-0.7
3,820,774	+		LRK53_RS17405	0.68	-0.2
3,820,774	+		LRK53_RS17405	0.68	-1.6
3,820,774	+		LRK53_RS17405	0.68	+0.7
3,820,774	+		LRK53_RS17405	0.68	-0.1
3,820,774	+		LRK53_RS17405	0.68	-0.9
3,820,774	+		LRK53_RS17405	0.68	-1.0
3,820,774	+		LRK53_RS17405	0.68	-0.8
3,820,774	+		LRK53_RS17405	0.68	-1.2
3,820,774	+		LRK53_RS17405	0.68	-0.7
3,820,774	+		LRK53_RS17405	0.68	-0.5
3,820,774	+		LRK53_RS17405	0.68	-2.1
3,820,774	+		LRK53_RS17405	0.68	-0.8
3,820,774	+		LRK53_RS17405	0.68	-1.0
3,820,774	+		LRK53_RS17405	0.68	+1.3
3,820,774	+		LRK53_RS17405	0.68	-0.4
3,820,774	+		LRK53_RS17405	0.68	-0.6
3,820,775	-		LRK53_RS17405	0.68	-1.7
3,820,775	-		LRK53_RS17405	0.68	-1.5
3,820,775	-		LRK53_RS17405	0.68	-1.8
3,820,775	-		LRK53_RS17405	0.68	-0.7
3,820,775	-		LRK53_RS17405	0.68	-1.4
3,820,775	-		LRK53_RS17405	0.68	-0.3
3,820,775	-		LRK53_RS17405	0.68	-0.0
3,820,775	-		LRK53_RS17405	0.68	-1.3
3,820,775	-		LRK53_RS17405	0.68	-1.7
3,820,775	-		LRK53_RS17405	0.68	+0.2
3,820,775	-		LRK53_RS17405	0.68	-1.2
3,820,775	-		LRK53_RS17405	0.68	-0.9
3,820,775	-		LRK53_RS17405	0.68	-0.7
3,820,775	-		LRK53_RS17405	0.68	-0.4
3,820,775	-		LRK53_RS17405	0.68	-0.4
3,820,775	-		LRK53_RS17405	0.68	-0.0
3,820,775	-		LRK53_RS17405	0.68	-2.0
3,820,775	-		LRK53_RS17405	0.68	-0.9
3,820,775	-		LRK53_RS17405	0.68	-1.0
3,820,775	-		LRK53_RS17405	0.68	+0.4
3,820,775	-		LRK53_RS17405	0.68	-1.9
3,820,777	+		LRK53_RS17405	0.68	-1.9
3,820,777	+		LRK53_RS17405	0.68	-0.4
3,820,777	+		LRK53_RS17405	0.68	-1.6
3,820,778	-		LRK53_RS17405	0.68	-0.0
3,820,778	-		LRK53_RS17405	0.68	-2.4
3,820,778	-		LRK53_RS17405	0.68	-0.0
3,820,778	-		LRK53_RS17405	0.68	-2.1
3,820,778	-		LRK53_RS17405	0.68	+0.7
3,820,993	+				-1.8
3,820,993	+				-1.4
3,820,993	+				+0.3
3,820,993	+				-1.8
3,820,993	+				-1.2
3,820,993	+				+0.5
3,820,993	+				-1.3
3,820,994	-				-1.4
3,820,994	-				-0.2
3,820,994	-				-1.1
3,820,994	-				-0.6
3,820,994	-				+1.2
3,820,994	-				-1.5
3,820,994	-				-1.5
3,820,994	-				-0.6
3,821,023	+				-1.6
3,821,023	+				+2.0
3,821,023	+				-0.2
3,821,023	+				-2.4
3,821,023	+				-1.5
3,821,023	+				+0.2
3,821,024	-				-2.7
3,821,024	-				+1.0
3,821,024	-				+0.4
3,821,033	+				-1.3
3,821,033	+				-1.9
3,821,034	-				-0.0
3,821,034	-				-0.3
3,821,157	+				-1.6
3,821,157	+				-3.0
3,821,157	+				+0.1
3,821,157	+				-0.4
3,821,157	+				+0.7
3,821,157	+				+1.8
3,821,157	+				-0.9
3,821,157	+				-1.6
3,821,157	+				-0.3
3,821,157	+				+0.1
3,821,158	-				-0.0
3,821,158	-				+0.8
3,821,271	+		LRK53_RS17410	0.27	-1.1
3,821,271	+		LRK53_RS17410	0.27	-1.4
3,821,272	-		LRK53_RS17410	0.27	-2.4
3,821,272	-		LRK53_RS17410	0.27	-0.9
3,821,513	+		LRK53_RS17410	0.77	-1.2
3,821,619	+				-1.0
3,821,619	+				+0.1
3,821,619	+				-2.5
3,821,619	+				-1.0
3,821,620	-				-1.6
3,821,620	-				-1.4
3,821,620	-				-0.4
3,821,620	-				-2.0
3,821,620	-				-1.4
3,821,802	+				-1.4
3,821,802	+				+0.2
3,821,802	+				-2.4
3,821,802	+				-1.5
3,821,802	+				-0.9
3,821,802	+				-0.6
3,821,802	+				+1.2
3,821,802	+				-0.6
3,821,802	+				+1.9
3,821,802	+				+1.3
3,821,802	+				+1.7
3,821,802	+				+0.4
3,821,802	+				-2.0
3,821,802	+				-0.2
3,821,802	+				-2.3
3,821,802	+				-1.2
3,821,802	+				-0.1
3,821,802	+				-1.7
3,821,802	+				-0.7
3,821,802	+				+0.4
3,821,802	+				-1.7
3,821,802	+				-2.4
3,821,802	+				-1.5
3,821,802	+				-2.4
3,821,803	-				-0.5
3,821,803	-				-2.0
3,821,803	-				+1.3
3,821,803	-				-0.2
3,821,803	-				-2.6
3,821,803	-				-1.3
3,821,803	-				-1.1
3,821,803	-				-1.4
3,821,803	-				-0.4
3,821,803	-				-2.1
3,821,803	-				-0.8
3,821,803	-				-1.8
3,821,803	-				-1.0
3,821,813	-				+0.1
3,821,813	-				-0.4
3,821,864	+				-3.1
3,821,865	-				+1.1