Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16365

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,600,529	+				-0.9
3,600,529	+				-0.4
3,600,715	+		LRK53_RS16355	0.77	+0.2
3,600,749	-				+0.6
3,600,749	-				+0.4
3,600,762	+				-1.8
3,600,763	-				-0.2
3,600,763	-				-0.2
3,600,802	+				-0.6
3,600,850	+				+0.4
3,600,850	+				-0.0
3,600,851	-				-1.7
3,600,851	-				-1.8
3,601,042	+		LRK53_RS16360	0.14	-0.3
3,601,042	+		LRK53_RS16360	0.14	-2.6
3,601,043	-		LRK53_RS16360	0.14	-0.3
3,601,043	-		LRK53_RS16360	0.14	-2.2
3,601,043	-		LRK53_RS16360	0.14	+0.6
3,601,043	-		LRK53_RS16360	0.14	+0.4
3,601,043	-		LRK53_RS16360	0.14	-0.0
3,601,063	+		LRK53_RS16360	0.19	+0.1
3,601,063	+		LRK53_RS16360	0.19	-1.5
3,601,063	+		LRK53_RS16360	0.19	-0.8
3,601,064	-		LRK53_RS16360	0.19	-1.8
3,601,064	-		LRK53_RS16360	0.19	-0.0
3,601,064	-		LRK53_RS16360	0.19	+2.0
3,601,064	-		LRK53_RS16360	0.19	+0.2
3,601,064	-		LRK53_RS16360	0.19	-1.2
3,601,104	+		LRK53_RS16360	0.28	-0.9
3,601,105	-		LRK53_RS16360	0.28	+1.0
3,601,117	+		LRK53_RS16360	0.31	-1.4
3,601,117	+		LRK53_RS16360	0.31	-1.2
3,601,118	-		LRK53_RS16360	0.31	-0.2
3,601,118	-		LRK53_RS16360	0.31	-0.2
3,601,118	-		LRK53_RS16360	0.31	-1.3
3,601,121	+		LRK53_RS16360	0.32	-1.1
3,601,121	+		LRK53_RS16360	0.32	-1.2
3,601,121	+		LRK53_RS16360	0.32	+0.1
3,601,121	+		LRK53_RS16360	0.32	-1.1
3,601,121	+		LRK53_RS16360	0.32	+0.5
3,601,122	-		LRK53_RS16360	0.32	+0.6
3,601,122	-		LRK53_RS16360	0.32	-0.1
3,601,122	-		LRK53_RS16360	0.32	-1.2
3,601,122	-		LRK53_RS16360	0.32	-0.6
3,601,122	-		LRK53_RS16360	0.32	+0.4
3,601,122	-		LRK53_RS16360	0.32	-2.7
3,601,156	+		LRK53_RS16360	0.40	-0.2
3,601,156	+		LRK53_RS16360	0.40	+0.3
3,601,157	-		LRK53_RS16360	0.40	+0.6
3,601,157	-		LRK53_RS16360	0.40	+0.2
3,601,157	-		LRK53_RS16360	0.40	-2.7
3,601,157	-		LRK53_RS16360	0.40	-0.7
3,601,157	-		LRK53_RS16360	0.40	+2.1
3,601,157	-		LRK53_RS16360	0.40	-1.7
3,601,157	-		LRK53_RS16360	0.40	-1.6
3,601,157	-		LRK53_RS16360	0.40	+0.8
3,601,219	-		LRK53_RS16360	0.54	-0.9
3,601,219	-		LRK53_RS16360	0.54	-0.6
3,601,219	-		LRK53_RS16360	0.54	+0.3
3,601,219	-		LRK53_RS16360	0.54	-0.7
3,601,219	-		LRK53_RS16360	0.54	-1.9
3,601,219	-		LRK53_RS16360	0.54	-1.0
3,601,219	-		LRK53_RS16360	0.54	-0.2
3,601,219	-		LRK53_RS16360	0.54	-0.6
3,601,219	-		LRK53_RS16360	0.54	-2.3
3,601,257	+		LRK53_RS16360	0.63	-0.6
3,601,257	+		LRK53_RS16360	0.63	-0.2
3,601,257	+		LRK53_RS16360	0.63	+1.2
3,601,257	+		LRK53_RS16360	0.63	-0.1
3,601,258	-		LRK53_RS16360	0.63	-0.2
3,601,258	-		LRK53_RS16360	0.63	-0.2
3,601,461	+				-2.2
3,601,478	+				-1.0
3,601,478	+				+0.3
3,601,478	+				-0.5
3,601,479	-				-0.4
3,601,479	-				-0.6
3,601,486	+				-1.8
3,601,487	-				-1.1
3,601,600	+				-0.5
3,601,600	+				+1.4
3,601,600	+				-0.4
3,601,600	+				+0.4
3,601,601	-				-0.1
3,601,601	-				+0.9
3,601,601	-				-0.2
3,601,627	+		LRK53_RS16365	0.11	-2.2
3,601,628	-		LRK53_RS16365	0.11	+0.7
3,601,628	-		LRK53_RS16365	0.11	-0.7
3,601,783	+		LRK53_RS16365	0.19	+1.0
3,601,783	+		LRK53_RS16365	0.19	-1.3
3,601,783	+		LRK53_RS16365	0.19	-0.2
3,601,811	-		LRK53_RS16365	0.21	-0.4
3,601,811	-		LRK53_RS16365	0.21	+0.3
3,601,874	+		LRK53_RS16365	0.24	-1.4
3,601,875	-		LRK53_RS16365	0.24	-1.2
3,601,875	-		LRK53_RS16365	0.24	+0.4
3,601,875	-		LRK53_RS16365	0.24	-1.8
3,601,888	+		LRK53_RS16365	0.25	-0.7
3,601,888	+		LRK53_RS16365	0.25	+0.3
3,601,888	+		LRK53_RS16365	0.25	-0.4
3,601,889	-		LRK53_RS16365	0.25	-0.7
3,602,150	-		LRK53_RS16365	0.39	+0.9
3,602,314	+		LRK53_RS16365	0.48	-0.4
3,602,314	+		LRK53_RS16365	0.48	-2.1
3,602,315	-		LRK53_RS16365	0.48	+2.0
3,602,315	-		LRK53_RS16365	0.48	+0.2
3,602,315	-		LRK53_RS16365	0.48	-0.8
3,602,315	-		LRK53_RS16365	0.48	-0.6
3,602,315	-		LRK53_RS16365	0.48	+0.6
3,602,416	+		LRK53_RS16365	0.53	-0.8
3,602,422	+		LRK53_RS16365	0.54	+2.9
3,602,422	+		LRK53_RS16365	0.54	-1.6
3,602,422	+		LRK53_RS16365	0.54	+1.0
3,602,422	+		LRK53_RS16365	0.54	-1.2
3,602,422	+		LRK53_RS16365	0.54	-1.9
3,602,422	+		LRK53_RS16365	0.54	+0.9
3,602,422	+		LRK53_RS16365	0.54	-0.6
3,602,422	+		LRK53_RS16365	0.54	-1.4
3,602,422	+		LRK53_RS16365	0.54	-1.3
3,602,422	+		LRK53_RS16365	0.54	-2.2
3,602,422	+		LRK53_RS16365	0.54	-3.0
3,602,422	+		LRK53_RS16365	0.54	-1.6
3,602,422	+		LRK53_RS16365	0.54	-1.9
3,602,422	+		LRK53_RS16365	0.54	-1.5
3,602,422	+		LRK53_RS16365	0.54	-1.0
3,602,422	+		LRK53_RS16365	0.54	+0.6
3,602,422	+		LRK53_RS16365	0.54	+1.0
3,602,422	+		LRK53_RS16365	0.54	-3.2
3,602,422	+		LRK53_RS16365	0.54	-0.2
3,602,422	+		LRK53_RS16365	0.54	+0.0
3,602,422	+		LRK53_RS16365	0.54	+0.2
3,602,422	+		LRK53_RS16365	0.54	+0.0
3,602,422	+		LRK53_RS16365	0.54	-1.6
3,602,422	+		LRK53_RS16365	0.54	-1.1
3,602,422	+		LRK53_RS16365	0.54	+2.8
3,602,422	+		LRK53_RS16365	0.54	+0.8
3,602,422	+		LRK53_RS16365	0.54	-1.0
3,602,422	+		LRK53_RS16365	0.54	-0.6
3,602,422	+		LRK53_RS16365	0.54	+0.9
3,602,423	-		LRK53_RS16365	0.54	-0.7
3,602,423	-		LRK53_RS16365	0.54	-1.9
3,602,423	-		LRK53_RS16365	0.54	-1.0
3,602,423	-		LRK53_RS16365	0.54	-1.4
3,602,423	-		LRK53_RS16365	0.54	-0.6
3,602,423	-		LRK53_RS16365	0.54	-1.0
3,602,423	-		LRK53_RS16365	0.54	-0.8
3,602,423	-		LRK53_RS16365	0.54	-0.2
3,602,423	-		LRK53_RS16365	0.54	-0.8
3,602,423	-		LRK53_RS16365	0.54	-0.8
3,602,423	-		LRK53_RS16365	0.54	-0.6
3,602,423	-		LRK53_RS16365	0.54	-1.0
3,602,423	-		LRK53_RS16365	0.54	+0.0
3,602,423	-		LRK53_RS16365	0.54	+0.2
3,602,423	-		LRK53_RS16365	0.54	-0.6
3,602,423	-		LRK53_RS16365	0.54	-0.9
3,602,423	-		LRK53_RS16365	0.54	-0.1
3,602,423	-		LRK53_RS16365	0.54	-0.3
3,602,423	-		LRK53_RS16365	0.54	-0.4
3,602,423	-		LRK53_RS16365	0.54	+0.5
3,602,423	-		LRK53_RS16365	0.54	-1.2
3,602,423	-		LRK53_RS16365	0.54	-1.3
3,602,423	-		LRK53_RS16365	0.54	-0.4
3,602,423	-		LRK53_RS16365	0.54	+0.3
3,602,423	-		LRK53_RS16365	0.54	+1.6
3,602,423	-		LRK53_RS16365	0.54	-1.8
3,602,423	-		LRK53_RS16365	0.54	+0.1
3,602,423	-		LRK53_RS16365	0.54	+0.8
3,602,423	-		LRK53_RS16365	0.54	-1.0
3,602,423	-		LRK53_RS16365	0.54	-0.6
3,602,423	-		LRK53_RS16365	0.54	-1.2
3,602,424	+		LRK53_RS16365	0.54	+0.7
3,602,424	+		LRK53_RS16365	0.54	-2.5
3,602,424	+		LRK53_RS16365	0.54	-1.1
3,602,424	+		LRK53_RS16365	0.54	-0.6
3,602,425	-		LRK53_RS16365	0.54	-0.6
3,602,425	-		LRK53_RS16365	0.54	-1.7
3,602,425	-		LRK53_RS16365	0.54	-0.1
3,602,425	-		LRK53_RS16365	0.54	-0.9
3,602,425	-		LRK53_RS16365	0.54	-1.2
3,602,425	-		LRK53_RS16365	0.54	+0.1
3,602,425	-		LRK53_RS16365	0.54	-0.5
3,602,425	-		LRK53_RS16365	0.54	+0.4
3,602,425	-		LRK53_RS16365	0.54	+0.1
3,602,425	-		LRK53_RS16365	0.54	-0.7
3,602,523	+		LRK53_RS16365	0.59	+0.8
3,602,756	-		LRK53_RS16365	0.72	+0.4
3,602,763	+		LRK53_RS16365	0.72	-0.4
3,602,803	+		LRK53_RS16365	0.74	-0.8
3,602,803	+		LRK53_RS16365	0.74	-0.7
3,602,804	-		LRK53_RS16365	0.74	-0.0
3,602,804	-		LRK53_RS16365	0.74	-2.9
3,602,804	-		LRK53_RS16365	0.74	-0.4
3,602,804	-		LRK53_RS16365	0.74	-0.0
3,602,804	-		LRK53_RS16365	0.74	+0.4
3,602,804	-		LRK53_RS16365	0.74	-0.6
3,602,828	-		LRK53_RS16365	0.76	+0.4
3,602,853	+		LRK53_RS16365	0.77	-0.4
3,602,854	-		LRK53_RS16365	0.77	-0.1
3,602,854	-		LRK53_RS16365	0.77	-1.1
3,602,881	+		LRK53_RS16365	0.78	-0.8
3,602,881	+		LRK53_RS16365	0.78	-1.3
3,602,882	-		LRK53_RS16365	0.78	-1.2
3,602,882	-		LRK53_RS16365	0.78	-0.9
3,602,882	-		LRK53_RS16365	0.78	-2.4
3,602,882	-		LRK53_RS16365	0.78	-0.8
3,602,904	-		LRK53_RS16365	0.80	-1.2
3,602,950	+		LRK53_RS16365	0.82	+0.4
3,602,950	+		LRK53_RS16365	0.82	-0.9
3,602,951	-		LRK53_RS16365	0.82	+0.5
3,602,951	-		LRK53_RS16365	0.82	-0.8
3,602,951	-		LRK53_RS16365	0.82	-1.9
3,603,064	+		LRK53_RS16365	0.88	+0.0
3,603,065	-		LRK53_RS16365	0.88	+0.4
3,603,243	+				-1.0
3,603,244	-				+0.1
3,603,244	-				-3.5
3,603,294	+				+2.0
3,603,294	+				-1.0
3,603,348	+				-0.6
3,603,358	+				+0.8
3,603,358	+				+0.1
3,603,358	+				+0.8
3,603,358	+				-0.8
3,603,358	+				-1.1
3,603,358	+				-1.7
3,603,358	+				-1.3
3,603,358	+				-2.3
3,603,358	+				-0.4
3,603,358	+				-1.2
3,603,358	+				-0.4
3,603,359	-				-0.3
3,603,359	-				-1.1
3,603,359	-				+0.4
3,603,359	-				-1.8
3,603,411	+				-0.2
3,603,412	-				-0.5
3,603,649	+		LRK53_RS16370	0.44	-0.3
3,603,649	+		LRK53_RS16370	0.44	-1.6
3,603,649	+		LRK53_RS16370	0.44	-0.2
3,603,649	+		LRK53_RS16370	0.44	+1.2
3,603,650	-		LRK53_RS16370	0.44	-1.4
3,603,650	-		LRK53_RS16370	0.44	-1.0
3,603,692	+		LRK53_RS16370	0.51	-0.3
3,603,784	-		LRK53_RS16370	0.65	+1.3
3,603,784	-		LRK53_RS16370	0.65	+0.0
3,603,838	+		LRK53_RS16370	0.74	-0.6
3,603,838	+		LRK53_RS16370	0.74	+0.0
3,603,838	+		LRK53_RS16370	0.74	-0.9
3,603,838	+		LRK53_RS16370	0.74	+1.1
3,603,839	-		LRK53_RS16370	0.74	-1.3
3,603,839	-		LRK53_RS16370	0.74	-0.6
3,603,839	-		LRK53_RS16370	0.74	-0.9
3,603,839	-		LRK53_RS16370	0.74	-1.8
3,603,861	+		LRK53_RS16370	0.78	-2.1
3,603,861	+		LRK53_RS16370	0.78	-0.5
3,603,862	-		LRK53_RS16370	0.78	-1.2
3,603,862	-		LRK53_RS16370	0.78	-0.1
3,603,918	+		LRK53_RS16370	0.86	-0.4
3,603,918	+		LRK53_RS16370	0.86	-0.5
3,603,918	+		LRK53_RS16370	0.86	+1.0
3,603,919	-		LRK53_RS16370	0.87	-0.7
3,603,919	-		LRK53_RS16370	0.87	-0.3
3,603,919	-		LRK53_RS16370	0.87	-0.0
3,603,919	-		LRK53_RS16370	0.87	-1.8
3,604,003	+				+0.4
3,604,003	+				-1.4
3,604,003	+				-0.9
3,604,003	+				+1.2
3,604,004	-				+0.1
3,604,004	-				-0.2
3,604,004	-				-0.6
3,604,004	-				-0.4
3,604,226	+		LRK53_RS16375	0.16	+0.8
3,604,226	+		LRK53_RS16375	0.16	-0.3
3,604,226	+		LRK53_RS16375	0.16	-0.2
3,604,226	+		LRK53_RS16375	0.16	-1.1
3,604,227	-		LRK53_RS16375	0.16	+2.0
3,604,227	-		LRK53_RS16375	0.16	+0.8
3,604,227	-		LRK53_RS16375	0.16	-0.8