Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15300

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,335,583	+		LRK53_RS15295	0.21	+1.2
3,335,584	-		LRK53_RS15295	0.21	-1.0
3,335,584	-		LRK53_RS15295	0.21	+0.5
3,335,953	+		LRK53_RS15295	0.52	-0.6
3,335,954	-		LRK53_RS15295	0.52	+1.4
3,336,025	+		LRK53_RS15295	0.59	-0.4
3,336,147	+		LRK53_RS15295	0.69	-1.7
3,336,147	+		LRK53_RS15295	0.69	-0.3
3,336,147	+		LRK53_RS15295	0.69	+1.6
3,336,148	-		LRK53_RS15295	0.69	+0.0
3,336,148	-		LRK53_RS15295	0.69	-1.7
3,336,148	-		LRK53_RS15295	0.69	-0.1
3,336,148	-		LRK53_RS15295	0.69	-1.2
3,336,225	+		LRK53_RS15295	0.76	+0.9
3,336,225	+		LRK53_RS15295	0.76	-1.5
3,336,225	+		LRK53_RS15295	0.76	-0.8
3,336,225	+		LRK53_RS15295	0.76	+0.3
3,336,225	+		LRK53_RS15295	0.76	-0.7
3,336,225	+		LRK53_RS15295	0.76	-0.9
3,336,225	+		LRK53_RS15295	0.76	-0.5
3,336,225	+		LRK53_RS15295	0.76	-2.0
3,336,225	+		LRK53_RS15295	0.76	-1.0
3,336,226	-		LRK53_RS15295	0.76	-2.7
3,336,226	-		LRK53_RS15295	0.76	-1.0
3,336,226	-		LRK53_RS15295	0.76	-1.5
3,336,226	-		LRK53_RS15295	0.76	-2.0
3,336,226	-		LRK53_RS15295	0.76	-0.0
3,336,226	-		LRK53_RS15295	0.76	+1.2
3,336,226	-		LRK53_RS15295	0.76	+1.4
3,336,226	-		LRK53_RS15295	0.76	-0.5
3,336,226	-		LRK53_RS15295	0.76	-0.3
3,336,392	+		LRK53_RS15295	0.90	-2.1
3,336,392	+		LRK53_RS15295	0.90	-1.5
3,336,393	-				-0.6
3,336,393	-				-0.4
3,336,393	-				-0.9
3,336,491	+				-0.6
3,336,491	+				-0.9
3,336,491	+				+1.8
3,336,491	+				+0.5
3,336,491	+				-0.4
3,336,491	+				+0.3
3,336,491	+				-0.5
3,336,491	+				-1.9
3,336,492	-				-0.7
3,336,492	-				+0.0
3,336,492	-				-2.4
3,336,576	+				-0.9
3,336,576	+				+0.0
3,336,576	+				-2.2
3,336,576	+				-1.7
3,336,576	+				-0.5
3,336,576	+				-1.1
3,336,576	+				-0.4
3,336,576	+				-2.1
3,336,576	+				+0.7
3,336,576	+				+1.0
3,336,576	+				-1.6
3,336,576	+				-0.2
3,336,576	+				+1.2
3,336,576	+				-0.7
3,336,577	-				+0.2
3,336,577	-				-3.5
3,336,577	-				-0.0
3,336,577	-				-2.4
3,336,577	-				-1.9
3,336,577	-				+0.6
3,336,577	-				-0.4
3,336,577	-				-0.1
3,336,577	-				-0.8
3,336,577	-				+0.6
3,336,577	-				-0.3
3,336,601	+				-2.0
3,336,602	-				-1.2
3,336,602	-				-1.6
3,336,602	-				-0.8
3,336,602	-				-0.5
3,336,602	-				-0.3
3,336,730	+				+1.6
3,336,731	-				-0.5
3,336,731	-				+0.7
3,336,901	+		LRK53_RS15300	0.16	-0.2
3,336,902	-		LRK53_RS15300	0.16	+1.5
3,336,902	-		LRK53_RS15300	0.16	-1.7
3,336,902	-		LRK53_RS15300	0.16	-1.2
3,337,021	+		LRK53_RS15300	0.21	-1.4
3,337,021	+		LRK53_RS15300	0.21	-0.3
3,337,022	-		LRK53_RS15300	0.21	-1.0
3,337,022	-		LRK53_RS15300	0.21	+1.2
3,337,022	-		LRK53_RS15300	0.21	-1.7
3,337,022	-		LRK53_RS15300	0.21	-0.9
3,337,094	-		LRK53_RS15300	0.25	+1.7
3,337,094	-		LRK53_RS15300	0.25	+0.3
3,337,108	+		LRK53_RS15300	0.26	-0.9
3,337,108	+		LRK53_RS15300	0.26	-0.6
3,337,108	+		LRK53_RS15300	0.26	+0.8
3,337,108	+		LRK53_RS15300	0.26	+0.6
3,337,108	+		LRK53_RS15300	0.26	-0.8
3,337,109	-		LRK53_RS15300	0.26	-0.9
3,337,109	-		LRK53_RS15300	0.26	-0.5
3,337,109	-		LRK53_RS15300	0.26	-0.7
3,337,109	-		LRK53_RS15300	0.26	-0.3
3,337,109	-		LRK53_RS15300	0.26	-0.1
3,337,114	+		LRK53_RS15300	0.26	-0.1
3,337,114	+		LRK53_RS15300	0.26	-0.0
3,337,115	-		LRK53_RS15300	0.26	+1.0
3,337,261	+		LRK53_RS15300	0.33	+0.9
3,337,261	+		LRK53_RS15300	0.33	-1.0
3,337,261	+		LRK53_RS15300	0.33	+0.6
3,337,261	+		LRK53_RS15300	0.33	+0.6
3,337,261	+		LRK53_RS15300	0.33	+0.8
3,337,261	+		LRK53_RS15300	0.33	-0.2
3,337,262	-		LRK53_RS15300	0.33	+0.9
3,337,262	-		LRK53_RS15300	0.33	+0.6
3,337,262	-		LRK53_RS15300	0.33	-1.4
3,337,262	-		LRK53_RS15300	0.33	-0.1
3,337,262	-		LRK53_RS15300	0.33	-1.0
3,337,262	-		LRK53_RS15300	0.33	+0.0
3,337,262	-		LRK53_RS15300	0.33	-1.2
3,337,262	-		LRK53_RS15300	0.33	-0.2
3,337,262	-		LRK53_RS15300	0.33	-2.3
3,337,262	-		LRK53_RS15300	0.33	+0.6
3,337,262	-		LRK53_RS15300	0.33	-1.9
3,337,291	+		LRK53_RS15300	0.34	-0.9
3,337,291	+		LRK53_RS15300	0.34	+0.8
3,337,291	+		LRK53_RS15300	0.34	-2.3
3,337,291	+		LRK53_RS15300	0.34	-0.7
3,337,292	-		LRK53_RS15300	0.34	-1.8
3,337,292	-		LRK53_RS15300	0.34	-0.5
3,337,318	+		LRK53_RS15300	0.36	-0.8
3,337,321	+		LRK53_RS15300	0.36	+1.4
3,337,321	+		LRK53_RS15300	0.36	-1.0
3,337,321	+		LRK53_RS15300	0.36	+0.2
3,337,321	+		LRK53_RS15300	0.36	+0.5
3,337,321	+		LRK53_RS15300	0.36	-0.1
3,337,321	+		LRK53_RS15300	0.36	-0.1
3,337,321	+		LRK53_RS15300	0.36	+0.5
3,337,321	+		LRK53_RS15300	0.36	-0.1
3,337,321	+		LRK53_RS15300	0.36	-1.0
3,337,321	+		LRK53_RS15300	0.36	-0.0
3,337,321	+		LRK53_RS15300	0.36	-1.7
3,337,321	+		LRK53_RS15300	0.36	-1.2
3,337,321	+		LRK53_RS15300	0.36	+0.5
3,337,321	+		LRK53_RS15300	0.36	-0.6
3,337,321	+		LRK53_RS15300	0.36	-0.4
3,337,322	-		LRK53_RS15300	0.36	+2.8
3,337,322	-		LRK53_RS15300	0.36	+0.2
3,337,322	-		LRK53_RS15300	0.36	-0.4
3,337,322	-		LRK53_RS15300	0.36	-0.9
3,337,322	-		LRK53_RS15300	0.36	+1.0
3,337,322	-		LRK53_RS15300	0.36	-1.0
3,337,322	-		LRK53_RS15300	0.36	+0.5
3,337,322	-		LRK53_RS15300	0.36	-0.8
3,337,322	-		LRK53_RS15300	0.36	+1.9
3,337,322	-		LRK53_RS15300	0.36	+1.2
3,337,322	-		LRK53_RS15300	0.36	-0.9
3,337,333	+		LRK53_RS15300	0.36	-0.9
3,337,334	-		LRK53_RS15300	0.36	+1.0
3,337,478	-		LRK53_RS15300	0.43	-0.0
3,337,714	+		LRK53_RS15300	0.55	-0.6
3,337,714	+		LRK53_RS15300	0.55	-1.6
3,337,714	+		LRK53_RS15300	0.55	+0.4
3,337,714	+		LRK53_RS15300	0.55	-0.8
3,337,714	+		LRK53_RS15300	0.55	-1.0
3,337,714	+		LRK53_RS15300	0.55	+0.2
3,337,714	+		LRK53_RS15300	0.55	-1.3
3,337,715	-		LRK53_RS15300	0.55	-0.6
3,337,715	-		LRK53_RS15300	0.55	+0.6
3,337,715	-		LRK53_RS15300	0.55	-1.4
3,337,715	-		LRK53_RS15300	0.55	-0.1
3,337,715	-		LRK53_RS15300	0.55	+0.2
3,337,715	-		LRK53_RS15300	0.55	-0.7
3,337,715	-		LRK53_RS15300	0.55	-1.1
3,337,715	-		LRK53_RS15300	0.55	-0.8
3,337,715	-		LRK53_RS15300	0.55	+0.4
3,337,715	-		LRK53_RS15300	0.55	-0.7
3,337,715	-		LRK53_RS15300	0.55	-1.4
3,337,715	-		LRK53_RS15300	0.55	-0.7
3,337,715	-		LRK53_RS15300	0.55	-2.3
3,337,715	-		LRK53_RS15300	0.55	-1.2
3,337,811	+		LRK53_RS15300	0.59	-1.7
3,338,252	-		LRK53_RS15300	0.80	-1.7
3,338,510	-				+0.5
3,338,524	+				-0.5
3,338,524	+				-0.5
3,338,524	+				+0.5
3,338,524	+				-0.9
3,338,524	+				-3.2
3,338,524	+				+0.5
3,338,524	+				+0.1
3,338,524	+				-1.7
3,338,524	+				+0.1
3,338,524	+				-1.2
3,338,524	+				-0.5
3,338,524	+				-1.0
3,338,524	+				+0.3
3,338,525	-				-1.5
3,338,525	-				-2.5
3,338,525	-				-0.0
3,338,525	-				-0.4
3,338,525	-				-1.8
3,338,525	-				-2.2
3,338,525	-				+0.3
3,338,525	-				-1.7
3,338,525	-				-0.9
3,338,525	-				-1.0
3,338,525	-				-1.6
3,338,525	-				-0.3
3,338,525	-				-2.3
3,338,525	-				-2.3
3,338,525	-				+0.1
3,338,582	+				-1.5
3,338,582	+				-0.4
3,338,582	+				+0.3
3,338,583	-				+0.1
3,338,583	-				-1.3
3,338,583	-				+1.9
3,338,583	-				+0.1
3,338,737	-				-0.9
3,338,894	+		LRK53_RS15305	0.16	-1.3
3,338,894	+		LRK53_RS15305	0.16	-0.8
3,339,137	-		LRK53_RS15305	0.34	+2.0
3,339,324	+		LRK53_RS15305	0.48	-0.8
3,339,324	+		LRK53_RS15305	0.48	-0.4
3,339,325	-		LRK53_RS15305	0.48	+0.3
3,339,325	-		LRK53_RS15305	0.48	+0.3
3,339,325	-		LRK53_RS15305	0.48	+0.6
3,339,570	+		LRK53_RS15305	0.67	-0.8
3,339,571	-		LRK53_RS15305	0.67	-1.1
3,339,628	+		LRK53_RS15305	0.71	-1.9
3,339,629	-		LRK53_RS15305	0.71	-2.7
3,339,629	-		LRK53_RS15305	0.71	-0.6
3,339,629	-		LRK53_RS15305	0.71	+0.8