Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14995

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,276,970	+		LRK53_RS14990	0.22	-1.0
3,276,970	+		LRK53_RS14990	0.22	-0.9
3,276,970	+		LRK53_RS14990	0.22	-0.0
3,276,970	+		LRK53_RS14990	0.22	-1.5
3,276,970	+		LRK53_RS14990	0.22	-0.1
3,276,970	+		LRK53_RS14990	0.22	-0.4
3,276,970	+		LRK53_RS14990	0.22	-0.7
3,276,971	-		LRK53_RS14990	0.22	+0.6
3,276,971	-		LRK53_RS14990	0.22	+2.2
3,277,347	+				+0.4
3,277,347	+				-0.6
3,277,347	+				-0.1
3,277,347	+				+0.7
3,277,347	+				-2.1
3,277,347	+				-0.4
3,277,347	+				-1.6
3,277,347	+				+0.2
3,277,347	+				-1.6
3,277,347	+				-0.6
3,277,347	+				-1.3
3,277,347	+				-0.9
3,277,347	+				+2.2
3,277,347	+				+0.1
3,277,348	-				-1.4
3,277,348	-				-0.6
3,277,348	-				-0.3
3,277,348	-				-2.3
3,277,348	-				-0.5
3,277,348	-				-0.2
3,277,359	+				-2.0
3,277,359	+				-1.2
3,277,359	+				+0.2
3,277,558	+				-0.2
3,277,558	+				+1.2
3,277,558	+				-1.7
3,277,559	-				-0.2
3,277,559	-				+0.3
3,277,559	-				-0.6
3,277,559	-				-0.9
3,277,559	-				-0.7
3,277,592	+				+0.8
3,277,592	+				-4.3
3,277,605	+				-2.2
3,277,605	+				-0.4
3,277,605	+				-0.9
3,277,605	+				-1.6
3,277,605	+				-0.8
3,277,606	-				-1.6
3,277,740	+		LRK53_RS14995	0.17	+0.6
3,277,740	+		LRK53_RS14995	0.17	-0.4
3,277,740	+		LRK53_RS14995	0.17	-0.2
3,277,740	+		LRK53_RS14995	0.17	-1.2
3,277,740	+		LRK53_RS14995	0.17	-0.8
3,277,741	-		LRK53_RS14995	0.17	-0.9
3,277,741	-		LRK53_RS14995	0.17	-0.6
3,277,741	-		LRK53_RS14995	0.17	-0.4
3,277,741	-		LRK53_RS14995	0.17	-1.9
3,277,743	+		LRK53_RS14995	0.17	-1.4
3,277,743	+		LRK53_RS14995	0.17	-0.4
3,277,744	-		LRK53_RS14995	0.18	-0.8
3,277,744	-		LRK53_RS14995	0.18	+0.2
3,277,744	-		LRK53_RS14995	0.18	-0.8
3,277,937	+		LRK53_RS14995	0.44	-0.9
3,277,937	+		LRK53_RS14995	0.44	-1.8
3,277,947	+		LRK53_RS14995	0.45	+0.6
3,277,947	+		LRK53_RS14995	0.45	+0.5
3,277,947	+		LRK53_RS14995	0.45	-0.5
3,277,947	+		LRK53_RS14995	0.45	-0.2
3,277,947	+		LRK53_RS14995	0.45	-1.6
3,277,947	+		LRK53_RS14995	0.45	+0.6
3,277,947	+		LRK53_RS14995	0.45	-2.0
3,277,948	-		LRK53_RS14995	0.46	-0.4
3,277,948	-		LRK53_RS14995	0.46	+0.3
3,278,130	+		LRK53_RS14995	0.71	+0.4
3,278,130	+		LRK53_RS14995	0.71	+0.5
3,278,130	+		LRK53_RS14995	0.71	+2.8
3,278,130	+		LRK53_RS14995	0.71	-0.4
3,278,130	+		LRK53_RS14995	0.71	-1.6
3,278,130	+		LRK53_RS14995	0.71	-0.6
3,278,130	+		LRK53_RS14995	0.71	-0.2
3,278,130	+		LRK53_RS14995	0.71	-1.1
3,278,130	+		LRK53_RS14995	0.71	-2.4
3,278,130	+		LRK53_RS14995	0.71	-1.9
3,278,130	+		LRK53_RS14995	0.71	-0.1
3,278,130	+		LRK53_RS14995	0.71	-1.7
3,278,130	+		LRK53_RS14995	0.71	-0.8
3,278,131	-		LRK53_RS14995	0.71	-1.5
3,278,131	-		LRK53_RS14995	0.71	-1.1
3,278,131	-		LRK53_RS14995	0.71	+0.2
3,278,131	-		LRK53_RS14995	0.71	-0.2
3,278,131	-		LRK53_RS14995	0.71	-0.8
3,278,131	-		LRK53_RS14995	0.71	-0.2
3,278,131	-		LRK53_RS14995	0.71	+0.2
3,278,131	-		LRK53_RS14995	0.71	-1.0
3,278,131	-		LRK53_RS14995	0.71	-1.3
3,278,131	-		LRK53_RS14995	0.71	-1.3
3,278,131	-		LRK53_RS14995	0.71	-0.8
3,278,131	-		LRK53_RS14995	0.71	-1.4
3,278,131	-		LRK53_RS14995	0.71	-0.2
3,278,131	-		LRK53_RS14995	0.71	-1.8
3,278,131	-		LRK53_RS14995	0.71	-0.3
3,278,131	-		LRK53_RS14995	0.71	-0.8
3,278,131	-		LRK53_RS14995	0.71	-3.1
3,278,131	-		LRK53_RS14995	0.71	-0.2
3,278,131	-		LRK53_RS14995	0.71	-0.8
3,278,131	-		LRK53_RS14995	0.71	-0.4
3,278,131	-		LRK53_RS14995	0.71	+1.5
3,278,131	-		LRK53_RS14995	0.71	-0.3
3,278,131	-		LRK53_RS14995	0.71	-1.2
3,278,131	-		LRK53_RS14995	0.71	-1.8
3,278,131	-		LRK53_RS14995	0.71	-1.1
3,278,131	-		LRK53_RS14995	0.71	+1.8
3,278,131	-		LRK53_RS14995	0.71	-0.6
3,278,131	-		LRK53_RS14995	0.71	-3.3
3,278,131	-		LRK53_RS14995	0.71	-0.8
3,278,131	-		LRK53_RS14995	0.71	-2.2
3,278,131	-		LRK53_RS14995	0.71	-2.0
3,278,131	-		LRK53_RS14995	0.71	-0.3
3,278,131	-		LRK53_RS14995	0.71	-0.2
3,278,131	-		LRK53_RS14995	0.71	-0.1
3,278,253	+		LRK53_RS14995	0.87	-0.8
3,278,326	-				-1.7
3,278,326	-				-1.2
3,278,427	+				-0.8
3,278,427	+				-2.8
3,278,428	-				-1.4
3,278,428	-				-1.7
3,278,428	-				-1.1
3,278,700	-		LRK53_RS15000	0.38	-1.1
3,278,813	+		LRK53_RS15000	0.50	-0.4
3,278,813	+		LRK53_RS15000	0.50	-0.4
3,278,813	+		LRK53_RS15000	0.50	-0.3
3,278,813	+		LRK53_RS15000	0.50	-1.2
3,278,814	-		LRK53_RS15000	0.51	+0.3
3,278,814	-		LRK53_RS15000	0.51	+0.3
3,279,283	+				-0.9
3,279,283	+				-0.6
3,279,283	+				-1.2
3,279,284	-				-0.1
3,279,284	-				-0.5
3,279,284	-				+0.9