Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14550

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,187,028	-		LRK53_RS14545	0.50	-1.5
3,187,103	+		LRK53_RS14545	0.54	-0.2
3,187,104	-		LRK53_RS14545	0.54	-0.2
3,187,195	+		LRK53_RS14545	0.59	+0.1
3,187,195	+		LRK53_RS14545	0.59	+0.2
3,187,196	-		LRK53_RS14545	0.59	+0.8
3,187,196	-		LRK53_RS14545	0.59	-1.5
3,187,196	-		LRK53_RS14545	0.59	+0.1
3,187,285	+		LRK53_RS14545	0.63	-2.4
3,187,286	-		LRK53_RS14545	0.64	+0.5
3,187,286	-		LRK53_RS14545	0.64	-0.4
3,187,286	-		LRK53_RS14545	0.64	+0.5
3,187,286	-		LRK53_RS14545	0.64	-0.9
3,187,286	-		LRK53_RS14545	0.64	-0.5
3,187,360	+		LRK53_RS14545	0.67	-1.6
3,187,360	+		LRK53_RS14545	0.67	-0.7
3,187,361	-		LRK53_RS14545	0.67	-1.4
3,187,361	-		LRK53_RS14545	0.67	-0.5
3,187,465	+		LRK53_RS14545	0.73	-0.9
3,187,465	+		LRK53_RS14545	0.73	-0.4
3,187,465	+		LRK53_RS14545	0.73	+1.1
3,187,465	+		LRK53_RS14545	0.73	-0.5
3,187,465	+		LRK53_RS14545	0.73	+0.2
3,187,465	+		LRK53_RS14545	0.73	-0.2
3,187,466	-		LRK53_RS14545	0.73	-0.6
3,187,466	-		LRK53_RS14545	0.73	+0.9
3,187,466	-		LRK53_RS14545	0.73	-2.2
3,187,481	+		LRK53_RS14545	0.74	+0.5
3,187,481	+		LRK53_RS14545	0.74	-1.2
3,187,482	-		LRK53_RS14545	0.74	-1.4
3,187,482	-		LRK53_RS14545	0.74	-0.7
3,187,482	-		LRK53_RS14545	0.74	-0.2
3,187,482	-		LRK53_RS14545	0.74	-0.0
3,187,482	-		LRK53_RS14545	0.74	-0.6
3,187,482	-		LRK53_RS14545	0.74	-0.9
3,187,482	-		LRK53_RS14545	0.74	-0.7
3,187,699	+		LRK53_RS14545	0.85	+0.2
3,187,699	+		LRK53_RS14545	0.85	-0.5
3,187,699	+		LRK53_RS14545	0.85	-0.8
3,187,699	+		LRK53_RS14545	0.85	-1.2
3,187,699	+		LRK53_RS14545	0.85	-0.9
3,187,699	+		LRK53_RS14545	0.85	+0.9
3,187,699	+		LRK53_RS14545	0.85	-1.0
3,187,700	-		LRK53_RS14545	0.85	+0.2
3,187,700	-		LRK53_RS14545	0.85	-0.6
3,187,700	-		LRK53_RS14545	0.85	-2.0
3,187,895	-				-0.2
3,187,895	-				-0.8
3,187,924	+				+2.2
3,187,924	+				-1.1
3,187,924	+				-0.2
3,187,925	-				+2.1
3,187,925	-				-1.6
3,187,925	-				-1.5
3,187,925	-				-1.5
3,187,925	-				+0.5
3,187,925	-				-0.7
3,187,925	-				-0.2
3,187,925	-				-0.6
3,187,925	-				-0.8
3,187,936	+				-2.8
3,187,936	+				+0.3
3,187,937	-				+0.2
3,187,982	+				-0.3
3,187,982	+				+0.0
3,187,983	-				-1.0
3,188,166	+		LRK53_RS14550	0.14	-1.1
3,188,167	-		LRK53_RS14550	0.14	-0.4
3,188,167	-		LRK53_RS14550	0.14	-0.0
3,188,167	-		LRK53_RS14550	0.14	+1.6
3,188,167	-		LRK53_RS14550	0.14	+1.1
3,188,235	+		LRK53_RS14550	0.20	-1.5
3,188,235	+		LRK53_RS14550	0.20	-0.4
3,188,235	+		LRK53_RS14550	0.20	+2.8
3,188,235	+		LRK53_RS14550	0.20	-2.5
3,188,235	+		LRK53_RS14550	0.20	-2.3
3,188,235	+		LRK53_RS14550	0.20	+0.5
3,188,235	+		LRK53_RS14550	0.20	+1.4
3,188,236	-		LRK53_RS14550	0.20	-2.4
3,188,236	-		LRK53_RS14550	0.20	-0.2
3,188,236	-		LRK53_RS14550	0.20	-1.1
3,188,236	-		LRK53_RS14550	0.20	-0.0
3,188,236	-		LRK53_RS14550	0.20	-3.3
3,188,236	-		LRK53_RS14550	0.20	-0.8
3,188,236	-		LRK53_RS14550	0.20	-3.3
3,188,236	-		LRK53_RS14550	0.20	-0.4
3,188,236	-		LRK53_RS14550	0.20	-1.5
3,188,236	-		LRK53_RS14550	0.20	-1.9
3,188,236	-		LRK53_RS14550	0.20	+1.2
3,188,236	-		LRK53_RS14550	0.20	-1.2
3,188,236	-		LRK53_RS14550	0.20	-0.8
3,188,643	+		LRK53_RS14550	0.57	-1.2
3,188,644	-		LRK53_RS14550	0.57	-0.4
3,188,666	+		LRK53_RS14550	0.59	-1.1
3,188,666	+		LRK53_RS14550	0.59	-0.2
3,188,667	-		LRK53_RS14550	0.59	-0.0
3,188,667	-		LRK53_RS14550	0.59	-0.8
3,188,667	-		LRK53_RS14550	0.59	-0.2
3,188,703	+		LRK53_RS14550	0.62	+0.2
3,188,703	+		LRK53_RS14550	0.62	-0.8
3,188,704	-		LRK53_RS14550	0.62	-1.1
3,189,004	-		LRK53_RS14550	0.90	-0.4
3,189,004	-		LRK53_RS14550	0.90	-1.5