Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14300

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,134,573	-		LRK53_RS14295	0.15	+0.1
3,134,590	+		LRK53_RS14295	0.16	+1.3
3,134,591	-		LRK53_RS14295	0.17	+1.5
3,134,591	-		LRK53_RS14295	0.17	-0.7
3,134,857	+		LRK53_RS14295	0.41	-0.9
3,134,858	-		LRK53_RS14295	0.41	+1.0
3,134,858	-		LRK53_RS14295	0.41	-0.0
3,134,858	-		LRK53_RS14295	0.41	-1.3
3,134,858	-		LRK53_RS14295	0.41	+0.5
3,134,858	-		LRK53_RS14295	0.41	+0.6
3,135,300	+		LRK53_RS14295	0.80	-1.0
3,135,300	+		LRK53_RS14295	0.80	-0.4
3,135,300	+		LRK53_RS14295	0.80	-1.4
3,135,300	+		LRK53_RS14295	0.80	-0.4
3,135,300	+		LRK53_RS14295	0.80	-1.5
3,135,300	+		LRK53_RS14295	0.80	-0.9
3,135,300	+		LRK53_RS14295	0.80	-1.2
3,135,300	+		LRK53_RS14295	0.80	-0.2
3,135,300	+		LRK53_RS14295	0.80	-0.0
3,135,300	+		LRK53_RS14295	0.80	-0.9
3,135,300	+		LRK53_RS14295	0.80	-0.0
3,135,300	+		LRK53_RS14295	0.80	-0.3
3,135,300	+		LRK53_RS14295	0.80	+0.8
3,135,300	+		LRK53_RS14295	0.80	+1.1
3,135,300	+		LRK53_RS14295	0.80	-0.5
3,135,300	+		LRK53_RS14295	0.80	-1.0
3,135,300	+		LRK53_RS14295	0.80	-0.1
3,135,300	+		LRK53_RS14295	0.80	-1.1
3,135,300	+		LRK53_RS14295	0.80	+0.0
3,135,300	+		LRK53_RS14295	0.80	-1.0
3,135,300	+		LRK53_RS14295	0.80	+0.3
3,135,300	+		LRK53_RS14295	0.80	-2.0
3,135,301	-		LRK53_RS14295	0.81	-0.7
3,135,301	-		LRK53_RS14295	0.81	-0.4
3,135,301	-		LRK53_RS14295	0.81	-2.2
3,135,301	-		LRK53_RS14295	0.81	-0.8
3,135,301	-		LRK53_RS14295	0.81	-1.2
3,135,301	-		LRK53_RS14295	0.81	-1.0
3,135,301	-		LRK53_RS14295	0.81	-1.9
3,135,301	-		LRK53_RS14295	0.81	-1.2
3,135,301	-		LRK53_RS14295	0.81	+1.2
3,135,301	-		LRK53_RS14295	0.81	+0.9
3,135,301	-		LRK53_RS14295	0.81	+0.8
3,135,301	-		LRK53_RS14295	0.81	-0.4
3,135,301	-		LRK53_RS14295	0.81	-1.0
3,135,301	-		LRK53_RS14295	0.81	-1.3
3,135,301	-		LRK53_RS14295	0.81	-1.8
3,135,301	-		LRK53_RS14295	0.81	+1.0
3,135,301	-		LRK53_RS14295	0.81	-0.7
3,135,301	-		LRK53_RS14295	0.81	-1.0
3,135,301	-		LRK53_RS14295	0.81	-0.2
3,135,301	-		LRK53_RS14295	0.81	-1.8
3,135,301	-		LRK53_RS14295	0.81	+0.5
3,135,301	-		LRK53_RS14295	0.81	-1.3
3,135,301	-		LRK53_RS14295	0.81	-0.6
3,135,301	-		LRK53_RS14295	0.81	-0.5
3,135,301	-		LRK53_RS14295	0.81	-1.1
3,135,301	-		LRK53_RS14295	0.81	+2.0
3,135,301	-		LRK53_RS14295	0.81	-0.9
3,135,301	-		LRK53_RS14295	0.81	+0.2
3,135,301	-		LRK53_RS14295	0.81	-0.8
3,135,301	-		LRK53_RS14295	0.81	-1.5
3,135,301	-		LRK53_RS14295	0.81	+0.7
3,135,301	-		LRK53_RS14295	0.81	-0.4
3,135,301	-		LRK53_RS14295	0.81	+0.7
3,135,304	+		LRK53_RS14295	0.81	-0.5
3,135,304	+		LRK53_RS14295	0.81	-0.3
3,135,305	-		LRK53_RS14295	0.81	-0.7
3,135,305	-		LRK53_RS14295	0.81	-1.5
3,135,409	+				-0.7
3,135,409	+				+0.6
3,135,409	+				+1.6
3,135,410	-				-0.8
3,135,410	-				-2.0
3,135,410	-				-0.7
3,135,410	-				-1.7
3,135,410	-				-0.0
3,135,410	-				-0.0
3,135,897	+		LRK53_RS14300	0.31	-0.0
3,135,898	-		LRK53_RS14300	0.31	-2.6
3,135,996	-		LRK53_RS14300	0.40	-0.8
3,135,996	-		LRK53_RS14300	0.40	-1.5
3,135,996	-		LRK53_RS14300	0.40	-0.8
3,136,208	+		LRK53_RS14300	0.60	+0.7
3,136,362	-		LRK53_RS14300	0.74	-0.2
3,136,362	-		LRK53_RS14300	0.74	+0.3
3,136,362	-		LRK53_RS14300	0.74	+0.9
3,136,362	-		LRK53_RS14300	0.74	-0.4
3,136,362	-		LRK53_RS14300	0.74	-0.4
3,136,362	-		LRK53_RS14300	0.74	+0.5
3,136,362	-		LRK53_RS14300	0.74	+0.2
3,136,436	+		LRK53_RS14300	0.81	-1.6
3,136,436	+		LRK53_RS14300	0.81	-1.1
3,136,436	+		LRK53_RS14300	0.81	-3.0
3,136,437	-		LRK53_RS14300	0.81	-1.3
3,136,437	-		LRK53_RS14300	0.81	-1.0
3,136,735	+				-0.8
3,136,735	+				-2.3
3,136,736	-				-1.1
3,136,774	+				-0.7
3,136,775	-				-1.8
3,136,775	-				-1.1
3,136,813	+				-0.6
3,136,813	+				-0.5
3,136,813	+				-1.1
3,136,813	+				+0.1
3,136,837	+				-0.8
3,136,838	-				-0.8
3,136,877	-		LRK53_RS14305	0.11	+1.4
3,136,996	+		LRK53_RS14305	0.16	-0.5
3,136,997	-		LRK53_RS14305	0.16	-2.5
3,136,997	-		LRK53_RS14305	0.16	-0.7
3,136,997	-		LRK53_RS14305	0.16	-1.4
3,136,997	-		LRK53_RS14305	0.16	-2.5
3,136,997	-		LRK53_RS14305	0.16	-1.0
3,137,014	+		LRK53_RS14305	0.17	-1.4
3,137,221	+		LRK53_RS14305	0.27	-1.1
3,137,222	-		LRK53_RS14305	0.27	+1.8
3,137,392	+		LRK53_RS14305	0.34	-0.8
3,137,392	+		LRK53_RS14305	0.34	-2.2
3,137,393	-		LRK53_RS14305	0.34	-2.3
3,137,393	-		LRK53_RS14305	0.34	-2.7
3,137,393	-		LRK53_RS14305	0.34	+0.3
3,137,515	+		LRK53_RS14305	0.40	-0.5
3,137,515	+		LRK53_RS14305	0.40	-0.8
3,137,515	+		LRK53_RS14305	0.40	-0.3
3,137,515	+		LRK53_RS14305	0.40	+0.5
3,137,516	-		LRK53_RS14305	0.40	-1.2
3,137,516	-		LRK53_RS14305	0.40	-0.9
3,137,516	-		LRK53_RS14305	0.40	-1.2
3,137,516	-		LRK53_RS14305	0.40	-0.4
3,137,516	-		LRK53_RS14305	0.40	+0.6
3,137,516	-		LRK53_RS14305	0.40	-0.9
3,137,537	-		LRK53_RS14305	0.41	-1.5