Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13660

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
3,011,420	+		LRK53_RS13650	0.82	-1.1
3,011,420	+		LRK53_RS13650	0.82	+0.4
3,011,420	+		LRK53_RS13650	0.82	-0.8
3,011,420	+		LRK53_RS13650	0.82	-1.6
3,011,421	-		LRK53_RS13650	0.82	-1.0
3,011,421	-		LRK53_RS13650	0.82	-1.5
3,011,421	-		LRK53_RS13650	0.82	+0.1
3,011,450	+		LRK53_RS13650	0.84	+0.6
3,011,450	+		LRK53_RS13650	0.84	+1.6
3,011,450	+		LRK53_RS13650	0.84	+0.0
3,011,450	+		LRK53_RS13650	0.84	-1.2
3,011,450	+		LRK53_RS13650	0.84	+1.8
3,011,450	+		LRK53_RS13650	0.84	-0.2
3,011,451	-		LRK53_RS13650	0.84	+0.5
3,011,451	-		LRK53_RS13650	0.84	-0.1
3,011,451	-		LRK53_RS13650	0.84	-1.2
3,011,451	-		LRK53_RS13650	0.84	+0.4
3,011,451	-		LRK53_RS13650	0.84	-1.8
3,011,451	-		LRK53_RS13650	0.84	-2.5
3,011,451	-		LRK53_RS13650	0.84	-0.5
3,011,570	+				+0.1
3,011,570	+				-0.2
3,011,570	+				-0.2
3,011,571	-				+2.2
3,011,571	-				-0.1
3,011,571	-				+0.2
3,011,571	-				-1.3
3,011,571	-				+1.8
3,011,615	+				+0.3
3,011,615	+				-0.1
3,011,615	+				-1.1
3,011,616	-				-1.2
3,011,616	-				+0.9
3,011,654	+				-1.9
3,011,654	+				+0.1
3,011,654	+				-0.1
3,011,654	+				+0.2
3,011,654	+				-1.3
3,011,654	+				+0.0
3,011,655	-				-0.8
3,011,655	-				-0.6
3,011,655	-				+0.4
3,011,655	-				-1.8
3,011,655	-				+0.8
3,011,802	+				-0.5
3,011,802	+				+0.4
3,011,802	+				-1.1
3,011,802	+				-0.6
3,011,803	-				-1.0
3,011,803	-				-0.5
3,011,804	+				+0.7
3,011,804	+				-0.4
3,011,804	+				+2.4
3,011,804	+				-0.3
3,011,804	+				+0.6
3,011,804	+				+0.9
3,011,804	+				+0.5
3,011,804	+				-0.0
3,011,804	+				-0.8
3,011,804	+				-0.1
3,011,804	+				-0.5
3,011,804	+				-0.2
3,011,804	+				-0.1
3,011,805	-				+1.5
3,011,805	-				-1.0
3,011,805	-				-0.5
3,011,805	-				-0.9
3,011,805	-				+0.4
3,011,805	-				-2.6
3,011,835	-				+1.6
3,012,023	+		LRK53_RS13655	0.67	+0.1
3,012,023	+		LRK53_RS13655	0.67	-2.1
3,012,023	+		LRK53_RS13655	0.67	+0.6
3,012,024	-		LRK53_RS13655	0.68	+1.1
3,012,024	-		LRK53_RS13655	0.68	+1.5
3,012,024	-		LRK53_RS13655	0.68	+0.8
3,012,024	-		LRK53_RS13655	0.68	+0.2
3,012,180	+				-1.7
3,012,180	+				-1.6
3,012,180	+				+1.2
3,012,180	+				-0.8
3,012,180	+				+0.4
3,012,180	+				-0.9
3,012,180	+				-0.3
3,012,180	+				-1.0
3,012,180	+				+0.4
3,012,180	+				-0.4
3,012,181	-				-1.3
3,012,181	-				+0.9
3,012,181	-				-0.4
3,012,181	-				-1.4
3,012,181	-				+2.1
3,012,181	-				-0.6
3,012,181	-				-3.0
3,012,181	-				-1.7
3,012,181	-				-0.9
3,012,181	-				+3.5
3,012,181	-				-2.2
3,012,181	-				+0.5
3,012,185	+				+0.7
3,012,185	+				-1.2
3,012,185	+				-0.5
3,012,186	-				+0.6
3,012,193	+				+0.5
3,012,193	+				-0.5
3,012,194	-				-0.6
3,012,194	-				+0.6
3,012,289	+				-0.2
3,012,289	+				-0.2
3,012,289	+				+0.8
3,012,289	+				-0.6
3,012,289	+				-0.4
3,012,289	+				-1.2
3,012,289	+				-1.1
3,012,289	+				-0.1
3,012,289	+				-0.9
3,012,290	-				-2.1
3,012,290	-				-0.6
3,012,429	+		LRK53_RS13660	0.12	-0.2
3,012,622	-		LRK53_RS13660	0.30	-0.0
3,012,630	+		LRK53_RS13660	0.31	+1.4
3,012,630	+		LRK53_RS13660	0.31	+0.7
3,012,630	+		LRK53_RS13660	0.31	+0.2
3,012,630	+		LRK53_RS13660	0.31	-0.3
3,012,630	+		LRK53_RS13660	0.31	+0.9
3,012,630	+		LRK53_RS13660	0.31	+0.2
3,012,630	+		LRK53_RS13660	0.31	-1.5
3,012,630	+		LRK53_RS13660	0.31	-0.9
3,012,630	+		LRK53_RS13660	0.31	+0.2
3,012,630	+		LRK53_RS13660	0.31	+0.5
3,012,630	+		LRK53_RS13660	0.31	-0.9
3,012,631	-		LRK53_RS13660	0.31	+0.4
3,012,631	-		LRK53_RS13660	0.31	-1.4
3,012,631	-		LRK53_RS13660	0.31	+0.3
3,012,631	-		LRK53_RS13660	0.31	-1.3
3,012,723	-		LRK53_RS13660	0.40	-0.7
3,013,655	+		LRK53_RS13665	0.15	+0.6
3,013,655	+		LRK53_RS13665	0.15	-0.8
3,013,656	-		LRK53_RS13665	0.15	+1.9
3,013,656	-		LRK53_RS13665	0.15	+0.4
3,013,700	+		LRK53_RS13665	0.17	-1.1
3,013,701	-		LRK53_RS13665	0.17	+0.3
3,013,706	+		LRK53_RS13665	0.17	-0.7
3,013,707	-		LRK53_RS13665	0.17	-0.2
3,013,970	+		LRK53_RS13665	0.29	-1.1
3,013,970	+		LRK53_RS13665	0.29	-0.8
3,013,970	+		LRK53_RS13665	0.29	-0.2
3,013,971	-		LRK53_RS13665	0.29	-0.4
3,013,971	-		LRK53_RS13665	0.29	+0.1
3,013,994	+		LRK53_RS13665	0.30	-0.4
3,013,994	+		LRK53_RS13665	0.30	+0.1
3,013,995	-		LRK53_RS13665	0.30	-1.5
3,014,048	+		LRK53_RS13665	0.33	+0.3
3,014,049	-		LRK53_RS13665	0.33	-1.8
3,014,049	-		LRK53_RS13665	0.33	-0.2
3,014,049	-		LRK53_RS13665	0.33	-1.5
3,014,205	+		LRK53_RS13665	0.40	+0.4
3,014,205	+		LRK53_RS13665	0.40	+0.4
3,014,205	+		LRK53_RS13665	0.40	+0.9
3,014,205	+		LRK53_RS13665	0.40	-0.6
3,014,205	+		LRK53_RS13665	0.40	-0.8
3,014,205	+		LRK53_RS13665	0.40	-1.0
3,014,206	-		LRK53_RS13665	0.40	-0.5
3,014,206	-		LRK53_RS13665	0.40	-2.2
3,014,206	-		LRK53_RS13665	0.40	-0.8
3,014,206	-		LRK53_RS13665	0.40	+0.6
3,014,236	+		LRK53_RS13665	0.42	-0.2
3,014,327	+		LRK53_RS13665	0.46	+0.2