Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12895

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
2,847,592	+				-0.9
2,847,592	+				+1.5
2,847,592	+				+0.3
2,847,592	+				-0.7
2,847,594	+				-0.6
2,847,757	-		LRK53_RS12885	0.18	-0.7
2,847,757	-		LRK53_RS12885	0.18	+1.4
2,847,757	-		LRK53_RS12885	0.18	-1.9
2,847,757	-		LRK53_RS12885	0.18	-0.8
2,848,189	+		LRK53_RS12890	0.22	-0.9
2,848,190	-		LRK53_RS12890	0.22	-2.4
2,848,190	-		LRK53_RS12890	0.22	-0.6
2,848,210	+		LRK53_RS12890	0.33	-1.2
2,848,210	+		LRK53_RS12890	0.33	-1.1
2,848,210	+		LRK53_RS12890	0.33	-2.2
2,848,210	+		LRK53_RS12890	0.33	-1.6
2,848,696	-		LRK53_RS12895	0.34	-2.5
2,848,749	+		LRK53_RS12895	0.41	-1.2
2,848,749	+		LRK53_RS12895	0.41	+0.1
2,848,749	+		LRK53_RS12895	0.41	-1.4
2,848,749	+		LRK53_RS12895	0.41	-0.4
2,848,750	-		LRK53_RS12895	0.41	-1.5
2,848,750	-		LRK53_RS12895	0.41	+0.2
2,848,750	-		LRK53_RS12895	0.41	-0.6
2,848,758	+		LRK53_RS12895	0.42	-0.5
2,848,758	+		LRK53_RS12895	0.42	-1.2
2,848,758	+		LRK53_RS12895	0.42	-1.2
2,848,759	-		LRK53_RS12895	0.42	+0.3
2,848,759	-		LRK53_RS12895	0.42	-1.0
2,848,759	-		LRK53_RS12895	0.42	-0.1
2,848,759	-		LRK53_RS12895	0.42	-0.9
2,848,759	-		LRK53_RS12895	0.42	-2.2
2,848,759	-		LRK53_RS12895	0.42	+2.8
2,848,775	+		LRK53_RS12895	0.44	-0.7
2,848,775	+		LRK53_RS12895	0.44	-1.2
2,848,776	-		LRK53_RS12895	0.44	-1.5
2,848,776	-		LRK53_RS12895	0.44	-1.4
2,848,776	-		LRK53_RS12895	0.44	-0.9
2,848,842	+		LRK53_RS12895	0.53	+0.2
2,848,843	-		LRK53_RS12895	0.53	+1.2
2,848,893	+		LRK53_RS12895	0.59	-1.3
2,848,893	+		LRK53_RS12895	0.59	-1.1
2,848,893	+		LRK53_RS12895	0.59	+0.2
2,848,893	+		LRK53_RS12895	0.59	-1.1
2,848,893	+		LRK53_RS12895	0.59	-1.9
2,848,894	-		LRK53_RS12895	0.60	-0.8
2,848,894	-		LRK53_RS12895	0.60	-1.5
2,848,894	-		LRK53_RS12895	0.60	+0.3
2,848,894	-		LRK53_RS12895	0.60	-1.1
2,848,923	+		LRK53_RS12895	0.63	+0.2
2,848,923	+		LRK53_RS12895	0.63	+0.2
2,848,923	+		LRK53_RS12895	0.63	-0.4
2,848,923	+		LRK53_RS12895	0.63	-1.8
2,848,923	+		LRK53_RS12895	0.63	-0.7
2,848,923	+		LRK53_RS12895	0.63	-0.9
2,848,923	+		LRK53_RS12895	0.63	-0.0
2,848,923	+		LRK53_RS12895	0.63	-2.4
2,848,923	+		LRK53_RS12895	0.63	-2.6
2,848,924	-		LRK53_RS12895	0.63	+0.6
2,848,924	-		LRK53_RS12895	0.63	-0.4
2,848,924	-		LRK53_RS12895	0.63	-1.4
2,848,924	-		LRK53_RS12895	0.63	-0.8
2,848,924	-		LRK53_RS12895	0.63	-0.7
2,848,924	-		LRK53_RS12895	0.63	+0.6
2,849,212	+				-0.8
2,849,212	+				+2.2
2,849,213	-				-0.3
2,849,213	-				+0.1
2,849,213	-				-0.5
2,849,213	-				+0.6
2,849,213	-				-0.4
2,849,213	-				+0.1
2,849,213	-				+0.2
2,849,213	-				-4.3
2,849,213	-				-1.1
2,849,237	-				-0.9
2,849,408	+				-2.2
2,849,408	+				-1.4
2,849,409	-				-0.7
2,849,409	-				-1.7
2,849,409	-				-1.5
2,849,409	-				-1.6
2,849,409	-				-0.9
2,849,409	-				+0.3
2,849,409	-				-1.2
2,849,409	-				-0.5
2,849,409	-				+0.2
2,849,409	-				-0.3
2,849,417	+				-1.8
2,849,418	-				-1.0
2,849,451	+				-0.1
2,849,451	+				+0.3
2,849,451	+				-0.5
2,849,451	+				-0.8
2,849,451	+				-0.8
2,849,612	+		LRK53_RS12900	0.13	-1.5
2,849,618	+		LRK53_RS12900	0.14	-0.4
2,849,619	-		LRK53_RS12900	0.14	-0.7
2,849,619	-		LRK53_RS12900	0.14	+0.6
2,849,663	+		LRK53_RS12900	0.17	-1.4
2,849,663	+		LRK53_RS12900	0.17	-0.9
2,849,663	+		LRK53_RS12900	0.17	-0.6
2,849,663	+		LRK53_RS12900	0.17	+0.3
2,849,663	+		LRK53_RS12900	0.17	+0.2
2,849,663	+		LRK53_RS12900	0.17	-1.6
2,849,664	-		LRK53_RS12900	0.17	-0.6
2,849,664	-		LRK53_RS12900	0.17	-0.3
2,849,664	-		LRK53_RS12900	0.17	-2.2
2,849,664	-		LRK53_RS12900	0.17	-3.4
2,849,664	-		LRK53_RS12900	0.17	-0.8
2,849,664	-		LRK53_RS12900	0.17	-1.7
2,849,664	-		LRK53_RS12900	0.17	+3.2
2,849,664	-		LRK53_RS12900	0.17	+1.5
2,849,664	-		LRK53_RS12900	0.17	-2.5
2,849,675	+		LRK53_RS12900	0.18	-0.2
2,849,675	+		LRK53_RS12900	0.18	-0.8
2,849,676	-		LRK53_RS12900	0.18	-1.9
2,849,696	+		LRK53_RS12900	0.19	-0.4
2,849,825	+		LRK53_RS12900	0.28	-1.8
2,849,825	+		LRK53_RS12900	0.28	+0.1
2,849,825	+		LRK53_RS12900	0.28	-0.4
2,849,826	-		LRK53_RS12900	0.28	-0.1
2,849,826	-		LRK53_RS12900	0.28	-1.1
2,849,859	+		LRK53_RS12900	0.31	-1.1
2,849,859	+		LRK53_RS12900	0.31	-0.8
2,849,859	+		LRK53_RS12900	0.31	-3.1
2,849,859	+		LRK53_RS12900	0.31	-0.3
2,849,859	+		LRK53_RS12900	0.31	+1.8
2,849,859	+		LRK53_RS12900	0.31	+0.2
2,849,859	+		LRK53_RS12900	0.31	-0.4
2,849,859	+		LRK53_RS12900	0.31	-0.7
2,849,859	+		LRK53_RS12900	0.31	+1.4
2,849,859	+		LRK53_RS12900	0.31	-1.1
2,849,859	+		LRK53_RS12900	0.31	-0.1
2,849,859	+		LRK53_RS12900	0.31	+0.1
2,849,859	+		LRK53_RS12900	0.31	-0.7
2,849,859	+		LRK53_RS12900	0.31	+0.4
2,849,859	+		LRK53_RS12900	0.31	-0.1
2,849,859	+		LRK53_RS12900	0.31	-0.6
2,849,860	-		LRK53_RS12900	0.31	-1.7
2,849,860	-		LRK53_RS12900	0.31	-0.9
2,849,860	-		LRK53_RS12900	0.31	-1.2
2,849,860	-		LRK53_RS12900	0.31	-0.5
2,849,860	-		LRK53_RS12900	0.31	-0.1
2,849,860	-		LRK53_RS12900	0.31	+0.4
2,849,860	-		LRK53_RS12900	0.31	-1.6
2,849,860	-		LRK53_RS12900	0.31	-0.4
2,849,860	-		LRK53_RS12900	0.31	-2.9
2,849,860	-		LRK53_RS12900	0.31	-1.6
2,849,921	+		LRK53_RS12900	0.35	+0.8
2,849,921	+		LRK53_RS12900	0.35	+0.2
2,849,922	-		LRK53_RS12900	0.35	+0.9
2,849,922	-		LRK53_RS12900	0.35	-1.2
2,849,922	-		LRK53_RS12900	0.35	-1.7
2,849,922	-		LRK53_RS12900	0.35	-0.7
2,849,922	-		LRK53_RS12900	0.35	-0.7
2,849,922	-		LRK53_RS12900	0.35	-0.1
2,849,942	+		LRK53_RS12900	0.36	-1.2
2,849,942	+		LRK53_RS12900	0.36	-2.9
2,849,943	-		LRK53_RS12900	0.36	-1.7
2,849,999	+		LRK53_RS12900	0.40	-0.4
2,849,999	+		LRK53_RS12900	0.40	+0.2
2,849,999	+		LRK53_RS12900	0.40	+0.8
2,849,999	+		LRK53_RS12900	0.40	+0.6
2,849,999	+		LRK53_RS12900	0.40	-1.5
2,850,000	-		LRK53_RS12900	0.40	-2.1
2,850,000	-		LRK53_RS12900	0.40	-1.9
2,850,001	+		LRK53_RS12900	0.41	-0.8
2,850,001	+		LRK53_RS12900	0.41	+0.4
2,850,002	-		LRK53_RS12900	0.41	-1.8
2,850,002	-		LRK53_RS12900	0.41	-1.9
2,850,068	+		LRK53_RS12900	0.45	-2.2
2,850,069	-		LRK53_RS12900	0.45	+2.0