Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05020

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
1,182,288	+		LRK53_RS05015	0.17	-0.4
1,182,288	+		LRK53_RS05015	0.17	-0.8
1,182,288	+		LRK53_RS05015	0.17	-0.6
1,182,288	+		LRK53_RS05015	0.17	-1.1
1,182,288	+		LRK53_RS05015	0.17	-0.3
1,182,288	+		LRK53_RS05015	0.17	-0.8
1,182,289	-		LRK53_RS05015	0.17	-0.4
1,182,289	-		LRK53_RS05015	0.17	-0.3
1,182,289	-		LRK53_RS05015	0.17	-0.7
1,182,289	-		LRK53_RS05015	0.17	-0.7
1,182,289	-		LRK53_RS05015	0.17	+1.2
1,182,335	+		LRK53_RS05015	0.21	-0.1
1,182,346	+		LRK53_RS05015	0.22	-0.6
1,182,349	+		LRK53_RS05015	0.23	-0.8
1,182,350	-		LRK53_RS05015	0.23	-0.1
1,182,350	-		LRK53_RS05015	0.23	+2.0
1,182,350	-		LRK53_RS05015	0.23	-0.7
1,182,350	-		LRK53_RS05015	0.23	-1.0
1,182,957	+		LRK53_RS05015	0.83	-0.6
1,182,958	-		LRK53_RS05015	0.83	+0.4
1,182,958	-		LRK53_RS05015	0.83	-2.5
1,182,958	-		LRK53_RS05015	0.83	-0.7
1,182,958	-		LRK53_RS05015	0.83	-1.6
1,183,234	+				-1.6
1,183,234	+				+1.5
1,183,234	+				-1.5
1,183,234	+				-1.4
1,183,234	+				-1.4
1,183,234	+				-1.9
1,183,234	+				+0.5
1,183,234	+				+0.0
1,183,234	+				+0.9
1,183,234	+				-0.6
1,183,234	+				-1.6
1,183,234	+				-2.7
1,183,235	-				+0.9
1,183,235	-				-0.3
1,183,235	-				-0.2
1,183,235	-				-0.1
1,183,235	-				-1.5
1,183,235	-				-0.3
1,183,235	-				-1.0
1,183,279	+				+0.9
1,183,279	+				-1.4
1,183,279	+				+0.8
1,183,280	-				-2.3
1,183,280	-				+0.3
1,183,280	-				-0.9
1,183,280	-				+0.9
1,183,280	-				-1.2
1,183,280	-				+0.6
1,183,280	-				-1.6
1,183,280	-				-2.2
1,183,300	+		LRK53_RS05020	0.10	-0.5
1,183,300	+		LRK53_RS05020	0.10	-2.2
1,183,301	-		LRK53_RS05020	0.10	-1.5
1,183,315	+		LRK53_RS05020	0.11	+0.7
1,183,315	+		LRK53_RS05020	0.11	-0.7
1,183,315	+		LRK53_RS05020	0.11	-0.3
1,183,315	+		LRK53_RS05020	0.11	+0.5
1,183,315	+		LRK53_RS05020	0.11	-1.5
1,183,315	+		LRK53_RS05020	0.11	-0.4
1,183,315	+		LRK53_RS05020	0.11	+2.0
1,183,315	+		LRK53_RS05020	0.11	-2.1
1,183,315	+		LRK53_RS05020	0.11	-0.4
1,183,315	+		LRK53_RS05020	0.11	-2.1
1,183,316	-		LRK53_RS05020	0.11	-1.8
1,183,316	-		LRK53_RS05020	0.11	-0.8
1,183,316	-		LRK53_RS05020	0.11	+0.4
1,183,316	-		LRK53_RS05020	0.11	-1.3
1,183,316	-		LRK53_RS05020	0.11	-1.0
1,183,316	-		LRK53_RS05020	0.11	-0.3
1,183,390	-		LRK53_RS05020	0.16	-0.4
1,183,390	-		LRK53_RS05020	0.16	-1.7
1,183,585	+		LRK53_RS05020	0.28	-2.6
1,183,585	+		LRK53_RS05020	0.28	-2.0
1,183,585	+		LRK53_RS05020	0.28	-0.4
1,183,585	+		LRK53_RS05020	0.28	-0.6
1,183,585	+		LRK53_RS05020	0.28	-0.7
1,183,585	+		LRK53_RS05020	0.28	-1.4
1,183,585	+		LRK53_RS05020	0.28	-0.1
1,183,586	-		LRK53_RS05020	0.28	+0.7
1,183,586	-		LRK53_RS05020	0.28	-1.1
1,183,586	-		LRK53_RS05020	0.28	-0.6
1,183,656	+		LRK53_RS05020	0.32	-0.8
1,184,011	+		LRK53_RS05020	0.54	-2.5
1,184,011	+		LRK53_RS05020	0.54	-0.3
1,184,011	+		LRK53_RS05020	0.54	+2.9
1,184,136	+		LRK53_RS05020	0.61	-1.3
1,184,136	+		LRK53_RS05020	0.61	-1.7
1,184,136	+		LRK53_RS05020	0.61	-1.0
1,184,137	-		LRK53_RS05020	0.61	-1.2
1,184,137	-		LRK53_RS05020	0.61	-0.1
1,184,137	-		LRK53_RS05020	0.61	-0.1
1,184,137	-		LRK53_RS05020	0.61	-1.6
1,184,137	-		LRK53_RS05020	0.61	+0.2
1,184,137	-		LRK53_RS05020	0.61	-1.1
1,184,137	-		LRK53_RS05020	0.61	-1.9
1,184,275	+		LRK53_RS05020	0.70	+0.3
1,184,275	+		LRK53_RS05020	0.70	+0.4
1,184,276	-		LRK53_RS05020	0.70	+0.2
1,184,276	-		LRK53_RS05020	0.70	-1.7
1,184,276	-		LRK53_RS05020	0.70	-1.6
1,184,276	-		LRK53_RS05020	0.70	+0.4
1,184,276	-		LRK53_RS05020	0.70	-0.8
1,184,345	+		LRK53_RS05020	0.74	-0.3
1,184,345	+		LRK53_RS05020	0.74	-0.1
1,184,345	+		LRK53_RS05020	0.74	-0.2
1,184,345	+		LRK53_RS05020	0.74	+0.9
1,184,345	+		LRK53_RS05020	0.74	-0.1
1,184,345	+		LRK53_RS05020	0.74	-1.1
1,184,345	+		LRK53_RS05020	0.74	-0.1
1,184,345	+		LRK53_RS05020	0.74	-1.2
1,184,345	+		LRK53_RS05020	0.74	-2.1
1,184,345	+		LRK53_RS05020	0.74	-1.7
1,184,345	+		LRK53_RS05020	0.74	-0.7
1,184,346	-		LRK53_RS05020	0.74	-0.3
1,184,346	-		LRK53_RS05020	0.74	-1.8
1,184,346	-		LRK53_RS05020	0.74	-1.5
1,184,346	-		LRK53_RS05020	0.74	-1.8
1,184,346	-		LRK53_RS05020	0.74	-1.2
1,184,346	-		LRK53_RS05020	0.74	-0.3
1,184,346	-		LRK53_RS05020	0.74	-0.4
1,184,346	-		LRK53_RS05020	0.74	-0.6
1,184,346	-		LRK53_RS05020	0.74	-0.5
1,184,346	-		LRK53_RS05020	0.74	+0.1
1,184,346	-		LRK53_RS05020	0.74	-2.6
1,184,346	-		LRK53_RS05020	0.74	-0.3
1,184,540	-		LRK53_RS05020	0.86	-1.3
1,184,540	-		LRK53_RS05020	0.86	-1.8
1,184,540	-		LRK53_RS05020	0.86	-0.6
1,184,590	+		LRK53_RS05020	0.89	-0.9
1,184,590	+		LRK53_RS05020	0.89	-0.5
1,184,590	+		LRK53_RS05020	0.89	-1.6
1,184,590	+		LRK53_RS05020	0.89	-1.2
1,184,590	+		LRK53_RS05020	0.89	-0.9
1,184,590	+		LRK53_RS05020	0.89	-1.4
1,184,590	+		LRK53_RS05020	0.89	-1.1
1,184,590	+		LRK53_RS05020	0.89	-1.6
1,184,590	+		LRK53_RS05020	0.89	-0.6
1,184,591	-		LRK53_RS05020	0.89	-0.5
1,184,591	-		LRK53_RS05020	0.89	+1.7
1,184,591	-		LRK53_RS05020	0.89	-1.1
1,184,591	-		LRK53_RS05020	0.89	-2.7
1,184,591	-		LRK53_RS05020	0.89	+0.8
1,184,591	-		LRK53_RS05020	0.89	+1.1
1,184,591	-		LRK53_RS05020	0.89	-1.2
1,184,591	-		LRK53_RS05020	0.89	-1.6
1,184,591	-		LRK53_RS05020	0.89	-1.0
1,184,591	-		LRK53_RS05020	0.89	+0.1
1,184,674	+				-1.0
1,184,674	+				-0.5
1,184,674	+				-0.8
1,184,675	-				+1.0
1,184,675	-				+0.2
1,184,787	+				+0.2
1,184,787	+				-0.8
1,184,787	+				-0.5
1,184,787	+				-0.5
1,184,787	+				+0.7
1,184,787	+				-0.5
1,184,787	+				-0.8
1,184,787	+				+0.7
1,184,787	+				-1.2
1,184,787	+				-0.4
1,184,787	+				+0.7
1,184,787	+				-0.4
1,184,787	+				-2.2
1,184,788	-				-0.5
1,184,788	-				-1.6
1,184,789	+				-1.1
1,184,789	+				-1.7
1,184,789	+				-0.3
1,184,790	-				+0.9
1,184,790	-				+0.7
1,184,790	-				-0.5
1,184,790	-				-0.7
1,184,790	-				+0.9
1,184,790	-				-0.7
1,184,802	+				+1.7
1,184,802	+				-1.0
1,184,802	+				+0.2
1,184,802	+				+0.9
1,184,802	+				-1.7
1,184,803	-				-0.2
1,184,803	-				-1.2
1,184,839	+				+0.2
1,184,839	+				-1.2
1,184,839	+				+0.2
1,184,839	+				-0.8
1,184,839	+				-1.5
1,184,840	-				+0.4
1,184,840	-				-0.2
1,184,840	-				-0.4
1,184,840	-				-2.1
1,184,840	-				-2.2
1,184,840	-				-0.7
1,184,840	-				-0.7
1,184,840	-				-1.2
1,184,841	+				-2.0
1,184,841	+				-1.3
1,184,841	+				-2.9
1,184,841	+				-0.3
1,184,841	+				-0.5
1,184,841	+				-2.5
1,184,841	+				-1.1
1,184,841	+				-0.1
1,184,841	+				-2.6
1,184,841	+				-0.2
1,184,841	+				-0.8
1,184,841	+				-0.7
1,184,842	-				-1.0
1,184,842	-				+0.2
1,184,842	-				-0.1
1,184,842	-				+0.5
1,184,842	-				-2.0
1,184,842	-				-3.0
1,184,842	-				-0.3
1,184,972	-				-0.3
1,184,981	+				-0.3
1,184,982	-				-0.6
1,184,982	-				-0.8
1,185,110	+				+0.5
1,185,110	+				-0.6
1,185,110	+				+0.3
1,185,110	+				-0.3
1,185,110	+				-3.0