Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00635

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
144,187	+		LRK53_RS00630	0.69	-0.8
144,187	+		LRK53_RS00630	0.69	-0.7
144,188	-		LRK53_RS00630	0.69	-1.3
144,188	-		LRK53_RS00630	0.69	-1.8
144,188	-		LRK53_RS00630	0.69	-0.0
144,196	+		LRK53_RS00630	0.69	+0.3
144,196	+		LRK53_RS00630	0.69	-1.2
144,196	+		LRK53_RS00630	0.69	-0.7
144,196	+		LRK53_RS00630	0.69	-1.5
144,196	+		LRK53_RS00630	0.69	+0.7
144,196	+		LRK53_RS00630	0.69	-0.5
144,196	+		LRK53_RS00630	0.69	-1.9
144,196	+		LRK53_RS00630	0.69	-0.9
144,196	+		LRK53_RS00630	0.69	+0.6
144,197	-		LRK53_RS00630	0.69	-0.6
144,199	+		LRK53_RS00630	0.70	-1.9
144,200	-		LRK53_RS00630	0.70	-0.7
144,268	+		LRK53_RS00630	0.72	-0.7
144,298	+		LRK53_RS00630	0.74	-1.4
144,298	+		LRK53_RS00630	0.74	-0.1
144,298	+		LRK53_RS00630	0.74	+0.2
144,298	+		LRK53_RS00630	0.74	-1.3
144,298	+		LRK53_RS00630	0.74	+0.1
144,298	+		LRK53_RS00630	0.74	-0.8
144,298	+		LRK53_RS00630	0.74	-0.5
144,298	+		LRK53_RS00630	0.74	-1.2
144,298	+		LRK53_RS00630	0.74	-1.3
144,298	+		LRK53_RS00630	0.74	+0.2
144,298	+		LRK53_RS00630	0.74	-3.0
144,299	-		LRK53_RS00630	0.74	+1.4
144,299	-		LRK53_RS00630	0.74	-1.5
144,299	-		LRK53_RS00630	0.74	-1.4
144,299	-		LRK53_RS00630	0.74	-0.9
144,299	-		LRK53_RS00630	0.74	-1.9
144,299	-		LRK53_RS00630	0.74	-1.0
144,299	-		LRK53_RS00630	0.74	-0.1
144,299	-		LRK53_RS00630	0.74	+1.6
144,299	-		LRK53_RS00630	0.74	-0.6
144,299	-		LRK53_RS00630	0.74	+2.0
144,299	-		LRK53_RS00630	0.74	-0.6
144,299	-		LRK53_RS00630	0.74	+2.4
144,299	-		LRK53_RS00630	0.74	-0.9
144,301	+		LRK53_RS00630	0.74	-0.2
144,301	+		LRK53_RS00630	0.74	-0.4
144,301	+		LRK53_RS00630	0.74	-0.3
144,301	+		LRK53_RS00630	0.74	-0.7
144,301	+		LRK53_RS00630	0.74	-0.8
144,301	+		LRK53_RS00630	0.74	+0.7
144,301	+		LRK53_RS00630	0.74	-1.5
144,301	+		LRK53_RS00630	0.74	-0.4
144,301	+		LRK53_RS00630	0.74	+0.6
144,301	+		LRK53_RS00630	0.74	+1.1
144,301	+		LRK53_RS00630	0.74	-1.4
144,302	-		LRK53_RS00630	0.74	-1.0
144,302	-		LRK53_RS00630	0.74	+1.0
144,302	-		LRK53_RS00630	0.74	+2.9
144,346	+		LRK53_RS00630	0.76	+1.1
144,346	+		LRK53_RS00630	0.76	-0.2
144,346	+		LRK53_RS00630	0.76	+0.5
144,346	+		LRK53_RS00630	0.76	-1.4
144,346	+		LRK53_RS00630	0.76	-0.5
144,346	+		LRK53_RS00630	0.76	-0.3
144,346	+		LRK53_RS00630	0.76	+1.9
144,346	+		LRK53_RS00630	0.76	-0.9
144,346	+		LRK53_RS00630	0.76	+0.2
144,347	-		LRK53_RS00630	0.76	-0.4
144,347	-		LRK53_RS00630	0.76	-0.8
144,347	-		LRK53_RS00630	0.76	+1.5
144,347	-		LRK53_RS00630	0.76	-0.1
144,347	-		LRK53_RS00630	0.76	-0.9
144,347	-		LRK53_RS00630	0.76	-1.5
144,347	-		LRK53_RS00630	0.76	-2.0
144,347	-		LRK53_RS00630	0.76	-1.0
144,347	-		LRK53_RS00630	0.76	-1.8
144,347	-		LRK53_RS00630	0.76	-0.8
144,367	+		LRK53_RS00630	0.76	-0.5
144,412	+		LRK53_RS00630	0.78	-1.3
144,412	+		LRK53_RS00630	0.78	-0.8
144,508	+		LRK53_RS00630	0.82	-0.4
144,508	+		LRK53_RS00630	0.82	-0.9
144,508	+		LRK53_RS00630	0.82	-0.6
144,508	+		LRK53_RS00630	0.82	+1.1
144,509	-		LRK53_RS00630	0.82	-1.4
144,509	-		LRK53_RS00630	0.82	-1.0
144,509	-		LRK53_RS00630	0.82	-0.1
144,520	+		LRK53_RS00630	0.83	+1.7
144,521	-		LRK53_RS00630	0.83	-1.3
144,521	-		LRK53_RS00630	0.83	-0.4
144,521	-		LRK53_RS00630	0.83	-1.2
144,521	-		LRK53_RS00630	0.83	-2.3
144,613	+		LRK53_RS00630	0.86	-0.2
144,613	+		LRK53_RS00630	0.86	+0.9
144,613	+		LRK53_RS00630	0.86	-1.3
144,613	+		LRK53_RS00630	0.86	-0.9
144,613	+		LRK53_RS00630	0.86	-2.6
144,613	+		LRK53_RS00630	0.86	-0.7
144,613	+		LRK53_RS00630	0.86	-2.3
144,614	-		LRK53_RS00630	0.87	-2.8
144,614	-		LRK53_RS00630	0.87	-1.7
144,614	-		LRK53_RS00630	0.87	-1.1
144,614	-		LRK53_RS00630	0.87	-1.5
144,625	+		LRK53_RS00630	0.87	+1.0
144,625	+		LRK53_RS00630	0.87	-1.4
144,625	+		LRK53_RS00630	0.87	-0.8
144,625	+		LRK53_RS00630	0.87	-0.3
144,625	+		LRK53_RS00630	0.87	+0.5
144,625	+		LRK53_RS00630	0.87	-1.7
144,625	+		LRK53_RS00630	0.87	+0.8
144,625	+		LRK53_RS00630	0.87	+0.1
144,625	+		LRK53_RS00630	0.87	+0.4
144,625	+		LRK53_RS00630	0.87	+2.5
144,625	+		LRK53_RS00630	0.87	-2.3
144,626	-		LRK53_RS00630	0.87	-2.2
144,626	-		LRK53_RS00630	0.87	-2.9
144,626	-		LRK53_RS00630	0.87	+1.3
144,626	-		LRK53_RS00630	0.87	+0.7
144,626	-		LRK53_RS00630	0.87	-1.4
144,626	-		LRK53_RS00630	0.87	-0.2
144,694	+		LRK53_RS00630	0.90	+1.1
144,694	+		LRK53_RS00630	0.90	+0.1
144,778	+				-3.2
144,778	+				-1.5
144,778	+				-1.3
144,778	+				+0.9
144,778	+				+0.2
144,779	-				-0.3
144,779	-				-0.7
144,779	-				-1.2
144,779	-				+0.8
144,779	-				+1.1
144,826	+				+0.9
144,868	+				-0.6
144,868	+				-1.1
144,868	+				+0.3
144,878	-				-0.7
144,907	+				-2.6
144,907	+				-1.4
144,907	+				-3.1
144,907	+				+0.9
144,907	+				-0.2
144,907	+				+1.0
144,907	+				+0.0
144,907	+				-0.9
144,908	-				-0.8
144,908	-				+0.9
144,908	-				-1.0
144,908	-				-1.0
144,908	-				-0.1
144,908	-				+0.3
144,908	-				-0.7
144,908	-				-0.6
144,908	-				-1.3
144,908	-				+0.1
144,908	-				+1.3
144,971	+				-0.4
144,971	+				-0.5
144,971	+				-1.0
144,971	+				-0.7
144,971	+				+0.0
144,971	+				-0.2
144,971	+				-0.5
144,971	+				+0.4
144,971	+				-3.0
144,971	+				-1.2
144,971	+				-0.9
144,971	+				-1.2
144,971	+				+1.4
144,972	-				+2.5
144,972	-				-1.3
144,972	-				-0.9
144,972	-				-1.6
144,972	-				-1.4
144,972	-				-0.5
144,972	-				-1.3
144,972	-				-0.3
144,972	-				+0.1
144,972	-				-0.8
144,972	-				-1.3
144,972	-				+1.3
144,972	-				-0.3
144,972	-				+0.3
144,972	-				+0.4
144,972	-				-0.3
144,975	+				+0.6
144,975	+				+0.1
144,975	+				-0.9
144,975	+				-0.6
144,976	-				+2.1
144,976	-				-0.8
144,976	-				-1.5
144,976	-				-2.1
144,976	-				-1.9
144,976	-				-1.7
144,976	-				-1.4
144,976	-				+0.1
145,042	-				+0.1
145,042	-				+0.0
145,042	-				+1.2
145,051	+				+0.1
145,051	+				+0.5
145,051	+				+0.4
145,052	-				-0.5
145,052	-				-0.1
145,052	-				-2.3
145,080	+				-0.1
145,080	+				-0.1
145,081	-				-1.7
145,139	+				+0.5
145,139	+				+0.7
145,140	-				-1.4
145,140	-				-0.2
145,280	+		LRK53_RS00635	0.22	-0.3
145,280	+		LRK53_RS00635	0.22	-0.4
145,281	-		LRK53_RS00635	0.22	+0.3
145,281	-		LRK53_RS00635	0.22	+0.1
145,395	+		LRK53_RS00635	0.42	+0.7
145,395	+		LRK53_RS00635	0.42	-0.1
145,395	+		LRK53_RS00635	0.42	-2.0
145,396	-		LRK53_RS00635	0.42	-1.4
145,396	-		LRK53_RS00635	0.42	+0.5
145,493	+		LRK53_RS00635	0.58	-0.5
145,493	+		LRK53_RS00635	0.58	+0.1
145,494	-		LRK53_RS00635	0.58	-0.0
145,494	-		LRK53_RS00635	0.58	-0.7
145,565	+		LRK53_RS00635	0.70	-1.5
145,566	-		LRK53_RS00635	0.70	+0.9
145,566	-		LRK53_RS00635	0.70	-1.5
145,631	+		LRK53_RS00635	0.81	-0.6
145,631	+		LRK53_RS00635	0.81	-1.3
145,631	+		LRK53_RS00635	0.81	-1.8
145,632	-		LRK53_RS00635	0.81	-1.8
145,632	-		LRK53_RS00635	0.81	+1.4
145,632	-		LRK53_RS00635	0.81	+1.3
145,632	-		LRK53_RS00635	0.81	+0.4
145,632	-		LRK53_RS00635	0.81	-3.6
145,658	+		LRK53_RS00635	0.86	-0.8
145,659	-		LRK53_RS00635	0.86	+1.9
145,715	+				-1.6
145,715	+				-0.9
145,715	+				-1.0
145,716	-				+1.4
145,716	-				-1.8
145,716	-				+0.3
145,716	-				+0.5
145,716	-				-0.5
145,716	-				-0.5
145,856	+				-0.5
145,863	+				-1.4
145,863	+				+2.2
145,863	+				-0.3
145,863	+				+0.8
145,863	+				+1.1
145,863	+				+0.8
145,863	+				-0.5
145,863	+				-0.6
145,863	+				+0.2
145,863	+				-0.0
145,863	+				-1.3
145,863	+				-1.8
145,864	-				+1.4
145,864	-				+0.1
145,864	-				-0.6
145,864	-				-2.1
145,864	-				-0.5
145,864	-				-0.4
145,864	-				-1.2
145,864	-				-1.6
145,864	-				-1.0
145,864	-				-0.7
145,864	-				-0.1
145,864	-				-1.4
145,864	-				-0.9
145,864	-				+0.6
145,864	-				+1.3
145,864	-				-0.6
145,864	-				-0.9
145,864	-				-0.7
145,864	-				-1.5
145,864	-				-1.1
145,864	-				+0.9
145,864	-				-3.3
145,864	-				-0.1
145,980	+		LRK53_RS00640	0.27	+0.3
145,980	+		LRK53_RS00640	0.27	-1.1
145,980	+		LRK53_RS00640	0.27	-2.8
145,980	+		LRK53_RS00640	0.27	-1.8
145,981	-		LRK53_RS00640	0.27	+0.8
145,981	-		LRK53_RS00640	0.27	-0.6
145,981	-		LRK53_RS00640	0.27	-1.3
145,981	-		LRK53_RS00640	0.27	+0.5
145,981	-		LRK53_RS00640	0.27	-1.4
146,163	+		LRK53_RS00640	0.56	-0.2
146,164	-		LRK53_RS00640	0.56	-1.7
146,307	+		LRK53_RS00640	0.78	+0.9
146,307	+		LRK53_RS00640	0.78	-1.5
146,308	-		LRK53_RS00640	0.79	-0.5
146,308	-		LRK53_RS00640	0.79	-0.7
146,308	-		LRK53_RS00640	0.79	-0.2
146,308	-		LRK53_RS00640	0.79	+0.5
146,308	-		LRK53_RS00640	0.79	+0.6
146,308	-		LRK53_RS00640	0.79	+0.4
146,343	+		LRK53_RS00640	0.84	-0.1
146,343	+		LRK53_RS00640	0.84	-2.4
146,343	+		LRK53_RS00640	0.84	+1.4
146,343	+		LRK53_RS00640	0.84	+0.1
146,343	+		LRK53_RS00640	0.84	+2.9
146,343	+		LRK53_RS00640	0.84	-1.9
146,343	+		LRK53_RS00640	0.84	-0.7
146,343	+		LRK53_RS00640	0.84	-0.1
146,343	+		LRK53_RS00640	0.84	-0.6
146,343	+		LRK53_RS00640	0.84	-1.7
146,343	+		LRK53_RS00640	0.84	-0.1
146,343	+		LRK53_RS00640	0.84	-0.8
146,343	+		LRK53_RS00640	0.84	-0.6
146,343	+		LRK53_RS00640	0.84	+0.1
146,343	+		LRK53_RS00640	0.84	+0.2
146,343	+		LRK53_RS00640	0.84	-2.4
146,343	+		LRK53_RS00640	0.84	-1.3
146,343	+		LRK53_RS00640	0.84	-1.0
146,344	-		LRK53_RS00640	0.84	+0.5
146,344	-		LRK53_RS00640	0.84	-1.0
146,344	-		LRK53_RS00640	0.84	-1.0
146,344	-		LRK53_RS00640	0.84	-0.8
146,344	-		LRK53_RS00640	0.84	-1.0
146,344	-		LRK53_RS00640	0.84	+0.4
146,344	-		LRK53_RS00640	0.84	-1.1
146,344	-		LRK53_RS00640	0.84	-0.6
146,344	-		LRK53_RS00640	0.84	-0.1
146,344	-		LRK53_RS00640	0.84	-0.9
146,344	-		LRK53_RS00640	0.84	-1.7
146,344	-		LRK53_RS00640	0.84	-0.6
146,344	-		LRK53_RS00640	0.84	+0.4
146,344	-		LRK53_RS00640	0.84	-0.0
146,344	-		LRK53_RS00640	0.84	-1.2
146,344	-		LRK53_RS00640	0.84	-1.7
146,344	-		LRK53_RS00640	0.84	-1.1
146,344	-		LRK53_RS00640	0.84	-0.6
146,344	-		LRK53_RS00640	0.84	-0.3
146,344	-		LRK53_RS00640	0.84	-0.5
146,344	-		LRK53_RS00640	0.84	-0.3
146,344	-		LRK53_RS00640	0.84	+0.3
146,344	-		LRK53_RS00640	0.84	-0.2
146,344	-		LRK53_RS00640	0.84	-0.9
146,344	-		LRK53_RS00640	0.84	+0.1
146,344	-		LRK53_RS00640	0.84	-1.4
146,344	-		LRK53_RS00640	0.84	-0.9
146,490	+				+2.4
146,491	-				+1.4
146,491	-				+0.1
146,491	-				-0.5
146,491	-				-1.0
146,492	+				-0.8
146,492	+				-0.6
146,492	+				+0.9
146,492	+				-0.4
146,492	+				+0.4
146,492	+				-2.3
146,493	-				-0.5
146,493	-				-1.6
146,493	-				+0.4
146,493	-				-1.5
146,493	-				-0.7
146,493	-				-3.8
146,498	+				-0.1
146,498	+				-0.7
146,498	+				+0.3
146,498	+				-1.1
146,498	+				-2.5
146,498	+				-1.0
146,498	+				-0.3
146,499	-				-0.9
146,499	-				-0.4
146,499	-				-1.2
146,499	-				-1.9
146,499	-				+0.2
146,499	-				+2.7
146,499	-				-1.2
146,499	-				-1.2
146,601	+				-0.6