Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS44235 and QEN71_RS44240 are separated by 166 nucleotides QEN71_RS44240 and QEN71_RS44245 are separated by 148 nucleotides
QEN71_RS44235: QEN71_RS44235 - IS5 family transposase, at 322,975 to 324,090
_RS44235
QEN71_RS44240: QEN71_RS44240 - transposase, at 324,257 to 324,631
_RS44240
QEN71_RS44245: QEN71_RS44245 - IS5 family transposase, at 324,780 to 326,102
_RS44245
Position (kb) 324
325 Strain fitness (log2 ratio) -2
-1
0
1 at 324.120 kb on + strand at 324.185 kb on + strand at 324.186 kb on - strand at 324.186 kb on - strand at 324.186 kb on - strand at 324.438 kb on - strand, within QEN71_RS44240 at 324.438 kb on - strand, within QEN71_RS44240 at 324.611 kb on + strand at 324.612 kb on - strand at 324.655 kb on + strand at 324.744 kb on + strand at 324.975 kb on + strand, within QEN71_RS44245 at 324.975 kb on + strand, within QEN71_RS44245 at 324.976 kb on - strand, within QEN71_RS44245 at 325.065 kb on + strand, within QEN71_RS44245 at 325.066 kb on - strand, within QEN71_RS44245 at 325.066 kb on - strand, within QEN71_RS44245 at 325.338 kb on + strand, within QEN71_RS44245 at 325.338 kb on + strand, within QEN71_RS44245 at 325.339 kb on - strand, within QEN71_RS44245 at 325.339 kb on - strand, within QEN71_RS44245 at 325.398 kb on + strand, within QEN71_RS44245 at 325.398 kb on + strand, within QEN71_RS44245 at 325.399 kb on - strand, within QEN71_RS44245 at 325.424 kb on + strand, within QEN71_RS44245 at 325.425 kb on - strand, within QEN71_RS44245 at 325.425 kb on - strand, within QEN71_RS44245 at 325.572 kb on + strand, within QEN71_RS44245 at 325.572 kb on + strand, within QEN71_RS44245
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 324,120 + -0.0 324,185 + +0.0 324,186 - -1.0 324,186 - -0.5 324,186 - -0.2 324,438 - QEN71_RS44240 0.48 -2.2 324,438 - QEN71_RS44240 0.48 -1.2 324,611 + -0.0 324,612 - -0.1 324,655 + -0.7 324,744 + +0.1 324,975 + QEN71_RS44245 0.15 +0.2 324,975 + QEN71_RS44245 0.15 -0.2 324,976 - QEN71_RS44245 0.15 +0.2 325,065 + QEN71_RS44245 0.22 -0.6 325,066 - QEN71_RS44245 0.22 +1.1 325,066 - QEN71_RS44245 0.22 -0.0 325,338 + QEN71_RS44245 0.42 -0.2 325,338 + QEN71_RS44245 0.42 -0.7 325,339 - QEN71_RS44245 0.42 +0.0 325,339 - QEN71_RS44245 0.42 -0.3 325,398 + QEN71_RS44245 0.47 -0.3 325,398 + QEN71_RS44245 0.47 +0.5 325,399 - QEN71_RS44245 0.47 +0.8 325,424 + QEN71_RS44245 0.49 +0.5 325,425 - QEN71_RS44245 0.49 +0.7 325,425 - QEN71_RS44245 0.49 -0.7 325,572 + QEN71_RS44245 0.60 +0.3 325,572 + QEN71_RS44245 0.60 +1.2
Or see this region's nucleotide sequence