Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37605 and QEN71_RS37610 are separated by 294 nucleotides QEN71_RS37610 and QEN71_RS37615 overlap by 1 nucleotides QEN71_RS37615 and QEN71_RS37620 are separated by 75 nucleotides
QEN71_RS37605: QEN71_RS37605 - D-cysteine desulfhydrase family protein, at 1,807,803 to 1,808,816
_RS37605
QEN71_RS37610: QEN71_RS37610 - DUF2282 domain-containing protein, at 1,809,111 to 1,809,389
_RS37610
QEN71_RS37615: QEN71_RS37615 - DoxX family protein, at 1,809,389 to 1,809,886
_RS37615
QEN71_RS37620: QEN71_RS37620 - alpha/beta hydrolase, at 1,809,962 to 1,810,726
_RS37620
Position (kb)
1809
1810 Strain fitness (log2 ratio)
-2
-1
0
1 at 1808.120 kb on + strand, within QEN71_RS37605 at 1808.120 kb on + strand, within QEN71_RS37605 at 1808.120 kb on + strand, within QEN71_RS37605 at 1808.120 kb on + strand, within QEN71_RS37605 at 1808.146 kb on + strand, within QEN71_RS37605 at 1808.146 kb on + strand, within QEN71_RS37605 at 1808.146 kb on + strand, within QEN71_RS37605 at 1808.147 kb on - strand, within QEN71_RS37605 at 1808.295 kb on + strand, within QEN71_RS37605 at 1808.345 kb on - strand, within QEN71_RS37605 at 1808.476 kb on + strand, within QEN71_RS37605 at 1808.477 kb on - strand, within QEN71_RS37605 at 1808.477 kb on - strand, within QEN71_RS37605 at 1808.592 kb on - strand, within QEN71_RS37605 at 1808.699 kb on - strand, within QEN71_RS37605 at 1808.702 kb on + strand, within QEN71_RS37605 at 1808.706 kb on + strand, within QEN71_RS37605 at 1808.817 kb on - strand at 1808.817 kb on - strand at 1808.915 kb on + strand at 1809.078 kb on + strand at 1809.079 kb on - strand at 1809.079 kb on - strand at 1809.111 kb on - strand at 1809.333 kb on - strand, within QEN71_RS37610 at 1809.666 kb on - strand, within QEN71_RS37615 at 1809.768 kb on - strand, within QEN71_RS37615 at 1809.961 kb on + strand at 1809.961 kb on + strand at 1809.961 kb on + strand at 1809.961 kb on + strand at 1809.962 kb on - strand at 1809.962 kb on - strand at 1809.962 kb on - strand at 1809.962 kb on - strand at 1809.962 kb on - strand at 1810.054 kb on - strand, within QEN71_RS37620 at 1810.137 kb on - strand, within QEN71_RS37620 at 1810.137 kb on - strand, within QEN71_RS37620
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 1,808,120 + QEN71_RS37605 0.31 -0.8 1,808,120 + QEN71_RS37605 0.31 -1.5 1,808,120 + QEN71_RS37605 0.31 +0.7 1,808,120 + QEN71_RS37605 0.31 +0.1 1,808,146 + QEN71_RS37605 0.34 -0.3 1,808,146 + QEN71_RS37605 0.34 -0.0 1,808,146 + QEN71_RS37605 0.34 -1.2 1,808,147 - QEN71_RS37605 0.34 -0.3 1,808,295 + QEN71_RS37605 0.49 -0.8 1,808,345 - QEN71_RS37605 0.53 +1.0 1,808,476 + QEN71_RS37605 0.66 +0.3 1,808,477 - QEN71_RS37605 0.66 +0.5 1,808,477 - QEN71_RS37605 0.66 -0.5 1,808,592 - QEN71_RS37605 0.78 +1.3 1,808,699 - QEN71_RS37605 0.88 -0.6 1,808,702 + QEN71_RS37605 0.89 -0.0 1,808,706 + QEN71_RS37605 0.89 +0.2 1,808,817 - +0.1 1,808,817 - -1.5 1,808,915 + +0.4 1,809,078 + -0.3 1,809,079 - +1.0 1,809,079 - +0.1 1,809,111 - +0.1 1,809,333 - QEN71_RS37610 0.80 -1.0 1,809,666 - QEN71_RS37615 0.56 -1.3 1,809,768 - QEN71_RS37615 0.76 +0.3 1,809,961 + -0.0 1,809,961 + +0.3 1,809,961 + +1.0 1,809,961 + -0.3 1,809,962 - +1.3 1,809,962 - -0.5 1,809,962 - -0.1 1,809,962 - -1.9 1,809,962 - -0.1 1,810,054 - QEN71_RS37620 0.12 -0.8 1,810,137 - QEN71_RS37620 0.23 +0.7 1,810,137 - QEN71_RS37620 0.23 +0.8
Or see this region's nucleotide sequence