Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS36060 and QEN71_RS36065 are separated by 58 nucleotides QEN71_RS36065 and QEN71_RS36070 are separated by 94 nucleotides QEN71_RS36070 and QEN71_RS36075 are separated by 2 nucleotides
QEN71_RS36060: QEN71_RS36060 - sugar ABC transporter ATP-binding protein, at 1,474,053 to 1,475,615
_RS36060
QEN71_RS36065: QEN71_RS36065 - sugar ABC transporter substrate-binding protein, at 1,475,674 to 1,476,783
_RS36065
QEN71_RS36070: QEN71_RS36070 - class II aldolase/adducin family protein, at 1,476,878 to 1,477,552
_RS36070
QEN71_RS36075: QEN71_RS36075 - S-methyl-5-thioribose-1-phosphate isomerase, at 1,477,555 to 1,478,643
_RS36075
Position (kb)
1475
1476
1477 Strain fitness (log2 ratio)
-2
-1
0
1 at 1474.811 kb on - strand, within QEN71_RS36060 at 1474.811 kb on - strand, within QEN71_RS36060 at 1474.959 kb on - strand, within QEN71_RS36060 at 1475.293 kb on + strand, within QEN71_RS36060 at 1475.293 kb on + strand, within QEN71_RS36060 at 1475.294 kb on - strand, within QEN71_RS36060 at 1475.765 kb on + strand at 1475.765 kb on + strand at 1476.156 kb on + strand, within QEN71_RS36065 at 1476.340 kb on - strand, within QEN71_RS36065 at 1476.803 kb on - strand at 1476.846 kb on + strand at 1476.985 kb on - strand, within QEN71_RS36070 at 1477.189 kb on - strand, within QEN71_RS36070 at 1477.189 kb on - strand, within QEN71_RS36070 at 1477.189 kb on - strand, within QEN71_RS36070 at 1477.189 kb on - strand, within QEN71_RS36070 at 1477.189 kb on - strand, within QEN71_RS36070 at 1477.205 kb on - strand, within QEN71_RS36070
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 1,474,811 - QEN71_RS36060 0.48 -1.0 1,474,811 - QEN71_RS36060 0.48 +0.5 1,474,959 - QEN71_RS36060 0.58 +0.0 1,475,293 + QEN71_RS36060 0.79 +0.7 1,475,293 + QEN71_RS36060 0.79 +0.2 1,475,294 - QEN71_RS36060 0.79 +0.8 1,475,765 + +0.3 1,475,765 + +0.4 1,476,156 + QEN71_RS36065 0.43 -0.9 1,476,340 - QEN71_RS36065 0.60 -2.0 1,476,803 - -0.7 1,476,846 + +1.2 1,476,985 - QEN71_RS36070 0.16 -0.3 1,477,189 - QEN71_RS36070 0.46 -2.2 1,477,189 - QEN71_RS36070 0.46 +0.5 1,477,189 - QEN71_RS36070 0.46 +0.0 1,477,189 - QEN71_RS36070 0.46 +0.0 1,477,189 - QEN71_RS36070 0.46 +0.0 1,477,205 - QEN71_RS36070 0.48 +0.8
Or see this region's nucleotide sequence