Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS35260 and QEN71_RS35265 are separated by 254 nucleotides QEN71_RS35265 and QEN71_RS35270 are separated by 71 nucleotides
QEN71_RS35260: QEN71_RS35260 - M15 family metallopeptidase, at 1,260,817 to 1,261,320
_RS35260
QEN71_RS35265: QEN71_RS35265 - hypothetical protein, at 1,261,575 to 1,262,330
_RS35265
QEN71_RS35270: QEN71_RS35270 - hypothetical protein, at 1,262,402 to 1,264,216
_RS35270
Position (kb)
1261
1262
1263 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1260.699 kb on + strand at 1260.845 kb on + strand at 1260.857 kb on + strand at 1260.858 kb on - strand at 1261.234 kb on + strand, within QEN71_RS35260 at 1261.355 kb on - strand at 1261.355 kb on - strand at 1261.378 kb on + strand at 1261.413 kb on - strand at 1261.429 kb on + strand at 1261.429 kb on + strand at 1261.709 kb on + strand, within QEN71_RS35265 at 1261.709 kb on + strand, within QEN71_RS35265 at 1262.001 kb on - strand, within QEN71_RS35265 at 1262.238 kb on + strand, within QEN71_RS35265 at 1262.239 kb on - strand, within QEN71_RS35265 at 1262.345 kb on + strand at 1262.346 kb on - strand at 1262.533 kb on + strand at 1262.533 kb on + strand at 1262.534 kb on - strand at 1262.668 kb on + strand, within QEN71_RS35270 at 1262.668 kb on + strand, within QEN71_RS35270 at 1262.700 kb on - strand, within QEN71_RS35270 at 1262.705 kb on + strand, within QEN71_RS35270 at 1262.705 kb on + strand, within QEN71_RS35270 at 1262.706 kb on - strand, within QEN71_RS35270 at 1262.750 kb on + strand, within QEN71_RS35270 at 1262.751 kb on - strand, within QEN71_RS35270 at 1262.751 kb on - strand, within QEN71_RS35270 at 1262.753 kb on - strand, within QEN71_RS35270 at 1262.753 kb on - strand, within QEN71_RS35270 at 1263.104 kb on + strand, within QEN71_RS35270 at 1263.104 kb on + strand, within QEN71_RS35270 at 1263.105 kb on - strand, within QEN71_RS35270 at 1263.288 kb on + strand, within QEN71_RS35270
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 1,260,699 + +1.8 1,260,845 + -2.6 1,260,857 + +0.4 1,260,858 - -0.3 1,261,234 + QEN71_RS35260 0.83 +0.0 1,261,355 - +0.9 1,261,355 - -1.2 1,261,378 + +0.9 1,261,413 - -1.0 1,261,429 + -0.0 1,261,429 + +1.4 1,261,709 + QEN71_RS35265 0.18 -1.7 1,261,709 + QEN71_RS35265 0.18 -0.4 1,262,001 - QEN71_RS35265 0.56 -1.6 1,262,238 + QEN71_RS35265 0.88 +0.6 1,262,239 - QEN71_RS35265 0.88 -0.1 1,262,345 + +0.4 1,262,346 - -1.6 1,262,533 + +0.0 1,262,533 + -0.2 1,262,534 - -0.1 1,262,668 + QEN71_RS35270 0.15 +0.8 1,262,668 + QEN71_RS35270 0.15 -0.3 1,262,700 - QEN71_RS35270 0.16 -0.3 1,262,705 + QEN71_RS35270 0.17 +0.3 1,262,705 + QEN71_RS35270 0.17 +0.7 1,262,706 - QEN71_RS35270 0.17 +0.7 1,262,750 + QEN71_RS35270 0.19 -1.0 1,262,751 - QEN71_RS35270 0.19 +0.1 1,262,751 - QEN71_RS35270 0.19 +0.5 1,262,753 - QEN71_RS35270 0.19 -0.6 1,262,753 - QEN71_RS35270 0.19 +0.4 1,263,104 + QEN71_RS35270 0.39 +1.1 1,263,104 + QEN71_RS35270 0.39 -0.1 1,263,105 - QEN71_RS35270 0.39 +1.0 1,263,288 + QEN71_RS35270 0.49 -1.6
Or see this region's nucleotide sequence