Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS34435 and QEN71_RS34440 are separated by 135 nucleotides QEN71_RS34440 and QEN71_RS34445 overlap by 4 nucleotides QEN71_RS34445 and QEN71_RS34450 are separated by 14 nucleotides
QEN71_RS34435: QEN71_RS34435 - LysR substrate-binding domain-containing protein, at 1,040,633 to 1,041,559
_RS34435
QEN71_RS34440: QEN71_RS34440 - MoaF C-terminal domain-containing protein, at 1,041,695 to 1,042,561
_RS34440
QEN71_RS34445: QEN71_RS34445 - SDR family oxidoreductase, at 1,042,558 to 1,043,361
_RS34445
QEN71_RS34450: QEN71_RS34450 - SDR family oxidoreductase, at 1,043,376 to 1,044,176
_RS34450
Position (kb)
1042
1043
1044 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1041.760 kb on + strand at 1041.761 kb on - strand at 1041.761 kb on - strand at 1041.829 kb on + strand, within QEN71_RS34440 at 1041.829 kb on + strand, within QEN71_RS34440 at 1041.830 kb on - strand, within QEN71_RS34440 at 1041.950 kb on + strand, within QEN71_RS34440 at 1041.950 kb on + strand, within QEN71_RS34440 at 1041.950 kb on + strand, within QEN71_RS34440 at 1041.950 kb on + strand, within QEN71_RS34440 at 1041.950 kb on + strand, within QEN71_RS34440 at 1041.951 kb on - strand, within QEN71_RS34440 at 1041.962 kb on + strand, within QEN71_RS34440 at 1042.244 kb on + strand, within QEN71_RS34440 at 1042.245 kb on - strand, within QEN71_RS34440 at 1042.250 kb on + strand, within QEN71_RS34440 at 1042.250 kb on + strand, within QEN71_RS34440 at 1042.250 kb on + strand, within QEN71_RS34440 at 1042.250 kb on + strand, within QEN71_RS34440 at 1042.251 kb on - strand, within QEN71_RS34440 at 1042.251 kb on - strand, within QEN71_RS34440 at 1042.251 kb on - strand, within QEN71_RS34440 at 1042.251 kb on - strand, within QEN71_RS34440 at 1042.251 kb on - strand, within QEN71_RS34440 at 1042.251 kb on - strand, within QEN71_RS34440 at 1042.252 kb on + strand, within QEN71_RS34440 at 1042.252 kb on + strand, within QEN71_RS34440 at 1042.276 kb on + strand, within QEN71_RS34440 at 1042.276 kb on + strand, within QEN71_RS34440 at 1042.276 kb on + strand, within QEN71_RS34440 at 1042.276 kb on + strand, within QEN71_RS34440 at 1042.277 kb on - strand, within QEN71_RS34440 at 1042.277 kb on - strand, within QEN71_RS34440 at 1042.277 kb on - strand, within QEN71_RS34440 at 1042.277 kb on - strand, within QEN71_RS34440 at 1042.277 kb on - strand, within QEN71_RS34440 at 1042.280 kb on + strand, within QEN71_RS34440 at 1042.280 kb on + strand, within QEN71_RS34440 at 1042.280 kb on + strand, within QEN71_RS34440 at 1042.281 kb on - strand, within QEN71_RS34440 at 1042.299 kb on - strand, within QEN71_RS34440 at 1042.383 kb on - strand, within QEN71_RS34440 at 1042.383 kb on - strand, within QEN71_RS34440 at 1043.257 kb on + strand, within QEN71_RS34445 at 1043.258 kb on - strand, within QEN71_RS34445 at 1043.282 kb on - strand at 1043.282 kb on - strand at 1043.282 kb on - strand at 1043.282 kb on - strand at 1043.282 kb on - strand at 1043.551 kb on + strand, within QEN71_RS34450 at 1043.551 kb on + strand, within QEN71_RS34450 at 1043.552 kb on - strand, within QEN71_RS34450 at 1043.637 kb on + strand, within QEN71_RS34450 at 1043.638 kb on - strand, within QEN71_RS34450 at 1043.638 kb on - strand, within QEN71_RS34450 at 1043.668 kb on + strand, within QEN71_RS34450 at 1043.723 kb on - strand, within QEN71_RS34450 at 1043.723 kb on - strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.865 kb on + strand, within QEN71_RS34450 at 1043.866 kb on - strand, within QEN71_RS34450 at 1043.866 kb on - strand, within QEN71_RS34450 at 1043.866 kb on - strand, within QEN71_RS34450 at 1044.228 kb on + strand at 1044.229 kb on - strand at 1044.229 kb on - strand at 1044.323 kb on - strand at 1044.323 kb on - strand at 1044.323 kb on - strand at 1044.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 1,041,760 + -0.8 1,041,761 - -0.6 1,041,761 - -1.7 1,041,829 + QEN71_RS34440 0.15 -0.6 1,041,829 + QEN71_RS34440 0.15 +1.8 1,041,830 - QEN71_RS34440 0.16 +0.5 1,041,950 + QEN71_RS34440 0.29 +0.5 1,041,950 + QEN71_RS34440 0.29 -0.5 1,041,950 + QEN71_RS34440 0.29 +0.2 1,041,950 + QEN71_RS34440 0.29 -0.7 1,041,950 + QEN71_RS34440 0.29 +0.1 1,041,951 - QEN71_RS34440 0.30 -0.6 1,041,962 + QEN71_RS34440 0.31 -0.6 1,042,244 + QEN71_RS34440 0.63 +0.4 1,042,245 - QEN71_RS34440 0.63 -0.1 1,042,250 + QEN71_RS34440 0.64 -0.0 1,042,250 + QEN71_RS34440 0.64 -0.1 1,042,250 + QEN71_RS34440 0.64 +0.0 1,042,250 + QEN71_RS34440 0.64 -0.6 1,042,251 - QEN71_RS34440 0.64 -0.2 1,042,251 - QEN71_RS34440 0.64 -0.7 1,042,251 - QEN71_RS34440 0.64 +0.6 1,042,251 - QEN71_RS34440 0.64 -0.3 1,042,251 - QEN71_RS34440 0.64 +0.0 1,042,251 - QEN71_RS34440 0.64 -0.8 1,042,252 + QEN71_RS34440 0.64 +0.0 1,042,252 + QEN71_RS34440 0.64 -0.5 1,042,276 + QEN71_RS34440 0.67 +0.1 1,042,276 + QEN71_RS34440 0.67 -0.4 1,042,276 + QEN71_RS34440 0.67 +0.8 1,042,276 + QEN71_RS34440 0.67 -1.0 1,042,277 - QEN71_RS34440 0.67 +0.6 1,042,277 - QEN71_RS34440 0.67 -0.3 1,042,277 - QEN71_RS34440 0.67 -0.6 1,042,277 - QEN71_RS34440 0.67 -0.6 1,042,277 - QEN71_RS34440 0.67 -0.3 1,042,280 + QEN71_RS34440 0.67 +0.4 1,042,280 + QEN71_RS34440 0.67 -1.8 1,042,280 + QEN71_RS34440 0.67 +0.1 1,042,281 - QEN71_RS34440 0.68 -1.2 1,042,299 - QEN71_RS34440 0.70 -0.7 1,042,383 - QEN71_RS34440 0.79 +1.5 1,042,383 - QEN71_RS34440 0.79 +0.1 1,043,257 + QEN71_RS34445 0.87 -0.3 1,043,258 - QEN71_RS34445 0.87 -0.9 1,043,282 - -0.8 1,043,282 - -0.4 1,043,282 - +0.8 1,043,282 - -2.6 1,043,282 - +0.2 1,043,551 + QEN71_RS34450 0.22 -0.3 1,043,551 + QEN71_RS34450 0.22 +1.4 1,043,552 - QEN71_RS34450 0.22 +0.7 1,043,637 + QEN71_RS34450 0.33 -0.3 1,043,638 - QEN71_RS34450 0.33 -0.4 1,043,638 - QEN71_RS34450 0.33 +0.6 1,043,668 + QEN71_RS34450 0.36 -0.4 1,043,723 - QEN71_RS34450 0.43 +0.1 1,043,723 - QEN71_RS34450 0.43 -0.1 1,043,865 + QEN71_RS34450 0.61 -0.7 1,043,865 + QEN71_RS34450 0.61 +0.9 1,043,865 + QEN71_RS34450 0.61 -0.5 1,043,865 + QEN71_RS34450 0.61 +0.7 1,043,865 + QEN71_RS34450 0.61 +0.4 1,043,865 + QEN71_RS34450 0.61 +0.4 1,043,865 + QEN71_RS34450 0.61 -0.1 1,043,865 + QEN71_RS34450 0.61 +0.9 1,043,866 - QEN71_RS34450 0.61 -1.0 1,043,866 - QEN71_RS34450 0.61 +0.4 1,043,866 - QEN71_RS34450 0.61 -0.7 1,044,228 + -0.3 1,044,229 - -0.8 1,044,229 - -0.6 1,044,323 - -0.8 1,044,323 - +0.1 1,044,323 - +1.0 1,044,323 - +0.1
Or see this region's nucleotide sequence