Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33315 and QEN71_RS33320 are separated by 180 nucleotides QEN71_RS33320 and QEN71_RS33325 are separated by 179 nucleotides QEN71_RS33325 and QEN71_RS33330 are separated by 214 nucleotides QEN71_RS33330 and QEN71_RS33335 are separated by 134 nucleotides
QEN71_RS33315: QEN71_RS33315 - TetR/AcrR family transcriptional regulator, at 798,749 to 799,360
_RS33315
QEN71_RS33320: QEN71_RS33320 - VOC family protein, at 799,541 to 799,948
_RS33320
QEN71_RS33325: QEN71_RS33325 - O-methyltransferase, at 800,128 to 800,304
_RS33325
QEN71_RS33330: QEN71_RS33330 - hypothetical protein, at 800,519 to 800,695
_RS33330
QEN71_RS33335: QEN71_RS33335 - hypothetical protein, at 800,830 to 801,882
_RS33335
Position (kb) 799
800 Strain fitness (log2 ratio) -2
-1
0
1
2 at 798.547 kb on - strand at 798.566 kb on + strand at 798.696 kb on + strand at 798.696 kb on + strand at 798.697 kb on - strand at 798.701 kb on + strand at 798.701 kb on + strand at 798.702 kb on - strand at 798.702 kb on - strand at 798.735 kb on + strand at 798.787 kb on + strand at 798.929 kb on + strand, within QEN71_RS33315 at 798.930 kb on - strand, within QEN71_RS33315 at 798.935 kb on + strand, within QEN71_RS33315 at 799.289 kb on + strand, within QEN71_RS33315 at 799.307 kb on + strand at 799.415 kb on + strand at 799.415 kb on + strand at 799.415 kb on + strand at 799.482 kb on - strand at 799.553 kb on - strand at 799.629 kb on - strand, within QEN71_RS33320 at 799.667 kb on + strand, within QEN71_RS33320 at 799.790 kb on + strand, within QEN71_RS33320 at 799.790 kb on + strand, within QEN71_RS33320 at 799.934 kb on - strand at 799.996 kb on - strand at 800.218 kb on + strand, within QEN71_RS33325 at 800.382 kb on + strand at 800.687 kb on - strand at 800.715 kb on + strand at 800.765 kb on + strand at 800.784 kb on + strand at 800.843 kb on + strand at 800.844 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 798,547 - +0.1 798,566 + +0.5 798,696 + +0.4 798,696 + +0.7 798,697 - -0.5 798,701 + +0.4 798,701 + -1.7 798,702 - -0.5 798,702 - -0.1 798,735 + -0.1 798,787 + -2.4 798,929 + QEN71_RS33315 0.29 -0.3 798,930 - QEN71_RS33315 0.30 +1.7 798,935 + QEN71_RS33315 0.30 -0.1 799,289 + QEN71_RS33315 0.88 +0.4 799,307 + -0.5 799,415 + -0.4 799,415 + -0.3 799,415 + +0.0 799,482 - -1.4 799,553 - -0.1 799,629 - QEN71_RS33320 0.22 -0.2 799,667 + QEN71_RS33320 0.31 -1.4 799,790 + QEN71_RS33320 0.61 -0.8 799,790 + QEN71_RS33320 0.61 -1.8 799,934 - -0.4 799,996 - +0.3 800,218 + QEN71_RS33325 0.51 -0.2 800,382 + +0.5 800,687 - +0.8 800,715 + +2.1 800,765 + +0.3 800,784 + +0.6 800,843 + -0.3 800,844 - -0.1
Or see this region's nucleotide sequence