Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31330 and QEN71_RS31335 are separated by 43 nucleotides QEN71_RS31335 and QEN71_RS31340 are separated by 23 nucleotides QEN71_RS31340 and QEN71_RS31345 are separated by 71 nucleotides
QEN71_RS31330: QEN71_RS31330 - ABC transporter substrate-binding protein, at 377,103 to 378,074
_RS31330
QEN71_RS31335: QEN71_RS31335 - amidohydrolase family protein, at 378,118 to 379,143
_RS31335
QEN71_RS31340: QEN71_RS31340 - amidohydrolase family protein, at 379,167 to 380,015
_RS31340
QEN71_RS31345: QEN71_RS31345 - aldolase/citrate lyase family protein, at 380,087 to 380,944
_RS31345
Position (kb) 378
379
380 Strain fitness (log2 ratio) -2
-1
0
1 at 377.266 kb on + strand, within QEN71_RS31330 at 377.266 kb on + strand, within QEN71_RS31330 at 377.266 kb on + strand, within QEN71_RS31330 at 377.266 kb on + strand, within QEN71_RS31330 at 377.289 kb on + strand, within QEN71_RS31330 at 377.289 kb on + strand, within QEN71_RS31330 at 377.289 kb on + strand, within QEN71_RS31330 at 377.290 kb on - strand, within QEN71_RS31330 at 377.290 kb on - strand, within QEN71_RS31330 at 377.307 kb on + strand, within QEN71_RS31330 at 377.742 kb on + strand, within QEN71_RS31330 at 377.746 kb on - strand, within QEN71_RS31330 at 377.746 kb on - strand, within QEN71_RS31330 at 377.763 kb on + strand, within QEN71_RS31330 at 377.835 kb on + strand, within QEN71_RS31330 at 378.081 kb on + strand at 378.093 kb on + strand at 378.094 kb on - strand at 378.511 kb on - strand, within QEN71_RS31335 at 378.611 kb on - strand, within QEN71_RS31335 at 378.697 kb on + strand, within QEN71_RS31335 at 378.698 kb on - strand, within QEN71_RS31335 at 379.010 kb on - strand, within QEN71_RS31335 at 379.221 kb on + strand at 379.371 kb on + strand, within QEN71_RS31340 at 379.372 kb on - strand, within QEN71_RS31340 at 379.372 kb on - strand, within QEN71_RS31340 at 379.395 kb on + strand, within QEN71_RS31340 at 379.764 kb on + strand, within QEN71_RS31340 at 379.764 kb on + strand, within QEN71_RS31340 at 379.764 kb on + strand, within QEN71_RS31340 at 379.765 kb on - strand, within QEN71_RS31340 at 379.765 kb on - strand, within QEN71_RS31340
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 377,266 + QEN71_RS31330 0.17 -0.0 377,266 + QEN71_RS31330 0.17 -2.0 377,266 + QEN71_RS31330 0.17 -0.4 377,266 + QEN71_RS31330 0.17 -0.0 377,289 + QEN71_RS31330 0.19 -0.3 377,289 + QEN71_RS31330 0.19 -0.3 377,289 + QEN71_RS31330 0.19 -0.6 377,290 - QEN71_RS31330 0.19 +0.4 377,290 - QEN71_RS31330 0.19 +0.1 377,307 + QEN71_RS31330 0.21 -0.7 377,742 + QEN71_RS31330 0.66 -0.6 377,746 - QEN71_RS31330 0.66 -1.6 377,746 - QEN71_RS31330 0.66 -0.2 377,763 + QEN71_RS31330 0.68 -0.7 377,835 + QEN71_RS31330 0.75 -0.1 378,081 + +0.2 378,093 + -0.8 378,094 - -1.5 378,511 - QEN71_RS31335 0.38 -0.3 378,611 - QEN71_RS31335 0.48 -0.0 378,697 + QEN71_RS31335 0.56 -1.6 378,698 - QEN71_RS31335 0.57 -1.0 379,010 - QEN71_RS31335 0.87 -1.1 379,221 + +0.5 379,371 + QEN71_RS31340 0.24 +0.3 379,372 - QEN71_RS31340 0.24 -0.5 379,372 - QEN71_RS31340 0.24 +0.2 379,395 + QEN71_RS31340 0.27 +0.4 379,764 + QEN71_RS31340 0.70 -0.2 379,764 + QEN71_RS31340 0.70 -0.1 379,764 + QEN71_RS31340 0.70 +0.2 379,765 - QEN71_RS31340 0.70 -0.2 379,765 - QEN71_RS31340 0.70 -0.0
Or see this region's nucleotide sequence