Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26620 and QEN71_RS26625 are separated by 378 nucleotides QEN71_RS26625 and QEN71_RS26630 are separated by 124 nucleotides
QEN71_RS26620: QEN71_RS26620 - catalase, at 5,941,100 to 5,942,548
_RS26620
QEN71_RS26625: QEN71_RS26625 - LysR substrate-binding domain-containing protein, at 5,942,927 to 5,943,886
_RS26625
QEN71_RS26630: QEN71_RS26630 - ATP-dependent DNA helicase RecG, at 5,944,011 to 5,946,233
_RS26630
Position (kb) 5942
5943
5944 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5941.953 kb on + strand, within QEN71_RS26620 at 5941.953 kb on + strand, within QEN71_RS26620 at 5941.953 kb on + strand, within QEN71_RS26620 at 5941.953 kb on + strand, within QEN71_RS26620 at 5941.954 kb on - strand, within QEN71_RS26620 at 5941.954 kb on - strand, within QEN71_RS26620 at 5941.986 kb on + strand, within QEN71_RS26620 at 5941.987 kb on - strand, within QEN71_RS26620 at 5942.094 kb on + strand, within QEN71_RS26620 at 5942.095 kb on - strand, within QEN71_RS26620 at 5942.167 kb on + strand, within QEN71_RS26620 at 5942.167 kb on + strand, within QEN71_RS26620 at 5942.168 kb on - strand, within QEN71_RS26620 at 5942.168 kb on - strand, within QEN71_RS26620 at 5942.168 kb on - strand, within QEN71_RS26620 at 5942.168 kb on - strand, within QEN71_RS26620 at 5942.168 kb on - strand, within QEN71_RS26620 at 5942.168 kb on - strand, within QEN71_RS26620 at 5942.188 kb on + strand, within QEN71_RS26620 at 5942.202 kb on + strand, within QEN71_RS26620 at 5942.203 kb on - strand, within QEN71_RS26620 at 5942.331 kb on + strand, within QEN71_RS26620 at 5942.548 kb on + strand at 5942.548 kb on + strand at 5942.548 kb on + strand at 5942.548 kb on + strand at 5942.548 kb on + strand at 5942.548 kb on + strand at 5942.548 kb on + strand at 5942.548 kb on + strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.549 kb on - strand at 5942.567 kb on + strand at 5942.568 kb on - strand at 5942.608 kb on + strand at 5942.608 kb on + strand at 5942.609 kb on - strand at 5942.609 kb on - strand at 5942.660 kb on + strand at 5942.660 kb on + strand at 5942.660 kb on + strand at 5942.661 kb on - strand at 5942.815 kb on + strand at 5942.818 kb on + strand at 5942.818 kb on + strand at 5942.819 kb on - strand at 5942.819 kb on - strand at 5942.819 kb on - strand at 5942.852 kb on + strand at 5942.853 kb on - strand at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.084 kb on + strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.085 kb on - strand, within QEN71_RS26625 at 5943.158 kb on - strand, within QEN71_RS26625 at 5943.181 kb on + strand, within QEN71_RS26625 at 5943.181 kb on + strand, within QEN71_RS26625 at 5943.181 kb on + strand, within QEN71_RS26625 at 5943.181 kb on + strand, within QEN71_RS26625 at 5943.181 kb on + strand, within QEN71_RS26625 at 5943.182 kb on - strand, within QEN71_RS26625 at 5943.182 kb on - strand, within QEN71_RS26625 at 5943.182 kb on - strand, within QEN71_RS26625 at 5943.182 kb on - strand, within QEN71_RS26625 at 5943.406 kb on - strand, within QEN71_RS26625 at 5943.406 kb on - strand, within QEN71_RS26625 at 5943.406 kb on - strand, within QEN71_RS26625 at 5943.504 kb on + strand, within QEN71_RS26625 at 5943.504 kb on + strand, within QEN71_RS26625 at 5943.504 kb on + strand, within QEN71_RS26625 at 5943.504 kb on + strand, within QEN71_RS26625 at 5943.504 kb on + strand, within QEN71_RS26625 at 5943.504 kb on + strand, within QEN71_RS26625 at 5943.505 kb on - strand, within QEN71_RS26625 at 5943.505 kb on - strand, within QEN71_RS26625 at 5943.505 kb on - strand, within QEN71_RS26625 at 5943.505 kb on - strand, within QEN71_RS26625 at 5943.576 kb on + strand, within QEN71_RS26625 at 5943.576 kb on + strand, within QEN71_RS26625 at 5943.576 kb on + strand, within QEN71_RS26625 at 5943.577 kb on - strand, within QEN71_RS26625 at 5943.591 kb on + strand, within QEN71_RS26625 at 5943.591 kb on + strand, within QEN71_RS26625 at 5943.591 kb on + strand, within QEN71_RS26625 at 5943.591 kb on + strand, within QEN71_RS26625 at 5943.592 kb on - strand, within QEN71_RS26625 at 5943.592 kb on - strand, within QEN71_RS26625 at 5943.752 kb on + strand, within QEN71_RS26625 at 5943.752 kb on + strand, within QEN71_RS26625 at 5943.753 kb on - strand, within QEN71_RS26625 at 5943.753 kb on - strand, within QEN71_RS26625 at 5943.864 kb on + strand at 5943.864 kb on + strand at 5943.864 kb on + strand at 5943.864 kb on + strand at 5943.864 kb on + strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.865 kb on - strand at 5943.907 kb on - strand at 5943.927 kb on - strand at 5943.928 kb on + strand at 5943.928 kb on + strand at 5943.928 kb on + strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.929 kb on - strand at 5943.934 kb on + strand at 5943.934 kb on + strand at 5943.934 kb on + strand at 5943.934 kb on + strand at 5943.935 kb on - strand at 5943.935 kb on - strand at 5944.024 kb on + strand at 5944.024 kb on + strand at 5944.025 kb on - strand at 5944.772 kb on - strand, within QEN71_RS26630
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 5,941,953 + QEN71_RS26620 0.59 -1.0 5,941,953 + QEN71_RS26620 0.59 -0.4 5,941,953 + QEN71_RS26620 0.59 +0.8 5,941,953 + QEN71_RS26620 0.59 +0.2 5,941,954 - QEN71_RS26620 0.59 +0.1 5,941,954 - QEN71_RS26620 0.59 -0.1 5,941,986 + QEN71_RS26620 0.61 -0.5 5,941,987 - QEN71_RS26620 0.61 +0.1 5,942,094 + QEN71_RS26620 0.69 -0.0 5,942,095 - QEN71_RS26620 0.69 +0.7 5,942,167 + QEN71_RS26620 0.74 +0.1 5,942,167 + QEN71_RS26620 0.74 -0.7 5,942,168 - QEN71_RS26620 0.74 -0.1 5,942,168 - QEN71_RS26620 0.74 -0.1 5,942,168 - QEN71_RS26620 0.74 +0.6 5,942,168 - QEN71_RS26620 0.74 -0.3 5,942,168 - QEN71_RS26620 0.74 +0.4 5,942,168 - QEN71_RS26620 0.74 -0.6 5,942,188 + QEN71_RS26620 0.75 -0.8 5,942,202 + QEN71_RS26620 0.76 -0.1 5,942,203 - QEN71_RS26620 0.76 -0.3 5,942,331 + QEN71_RS26620 0.85 +0.0 5,942,548 + +0.1 5,942,548 + +0.6 5,942,548 + -0.8 5,942,548 + +0.8 5,942,548 + +0.8 5,942,548 + -0.6 5,942,548 + -0.6 5,942,548 + +0.6 5,942,549 - -0.3 5,942,549 - -1.1 5,942,549 - -0.0 5,942,549 - -0.3 5,942,549 - +0.5 5,942,549 - -1.1 5,942,549 - +1.1 5,942,549 - -0.2 5,942,549 - +1.0 5,942,549 - -0.5 5,942,549 - -0.0 5,942,549 - +0.1 5,942,549 - +0.3 5,942,567 + -0.2 5,942,568 - +0.1 5,942,608 + -0.8 5,942,608 + -0.4 5,942,609 - +0.7 5,942,609 - -0.6 5,942,660 + -1.1 5,942,660 + -2.1 5,942,660 + -1.8 5,942,661 - +0.3 5,942,815 + +0.0 5,942,818 + +0.6 5,942,818 + +0.7 5,942,819 - -0.3 5,942,819 - +0.2 5,942,819 - -0.2 5,942,852 + -0.3 5,942,853 - -0.2 5,943,084 + QEN71_RS26625 0.16 +0.2 5,943,084 + QEN71_RS26625 0.16 -1.5 5,943,084 + QEN71_RS26625 0.16 -1.6 5,943,084 + QEN71_RS26625 0.16 -1.3 5,943,084 + QEN71_RS26625 0.16 -2.4 5,943,084 + QEN71_RS26625 0.16 -1.0 5,943,084 + QEN71_RS26625 0.16 -1.0 5,943,084 + QEN71_RS26625 0.16 -1.7 5,943,084 + QEN71_RS26625 0.16 -1.1 5,943,085 - QEN71_RS26625 0.16 -1.1 5,943,085 - QEN71_RS26625 0.16 +1.5 5,943,085 - QEN71_RS26625 0.16 -0.8 5,943,085 - QEN71_RS26625 0.16 -1.8 5,943,085 - QEN71_RS26625 0.16 -0.5 5,943,085 - QEN71_RS26625 0.16 -0.9 5,943,085 - QEN71_RS26625 0.16 -0.6 5,943,085 - QEN71_RS26625 0.16 -1.3 5,943,158 - QEN71_RS26625 0.24 -1.9 5,943,181 + QEN71_RS26625 0.26 -1.6 5,943,181 + QEN71_RS26625 0.26 -2.4 5,943,181 + QEN71_RS26625 0.26 -2.8 5,943,181 + QEN71_RS26625 0.26 -1.8 5,943,181 + QEN71_RS26625 0.26 -1.7 5,943,182 - QEN71_RS26625 0.27 -1.7 5,943,182 - QEN71_RS26625 0.27 -1.3 5,943,182 - QEN71_RS26625 0.27 -1.0 5,943,182 - QEN71_RS26625 0.27 +0.8 5,943,406 - QEN71_RS26625 0.50 -1.9 5,943,406 - QEN71_RS26625 0.50 -1.0 5,943,406 - QEN71_RS26625 0.50 -1.8 5,943,504 + QEN71_RS26625 0.60 -1.3 5,943,504 + QEN71_RS26625 0.60 +0.6 5,943,504 + QEN71_RS26625 0.60 -2.2 5,943,504 + QEN71_RS26625 0.60 -2.9 5,943,504 + QEN71_RS26625 0.60 -0.7 5,943,504 + QEN71_RS26625 0.60 -1.7 5,943,505 - QEN71_RS26625 0.60 -2.0 5,943,505 - QEN71_RS26625 0.60 -1.5 5,943,505 - QEN71_RS26625 0.60 -1.4 5,943,505 - QEN71_RS26625 0.60 -1.8 5,943,576 + QEN71_RS26625 0.68 -0.6 5,943,576 + QEN71_RS26625 0.68 -0.7 5,943,576 + QEN71_RS26625 0.68 -1.7 5,943,577 - QEN71_RS26625 0.68 +2.5 5,943,591 + QEN71_RS26625 0.69 +0.5 5,943,591 + QEN71_RS26625 0.69 -0.5 5,943,591 + QEN71_RS26625 0.69 +0.7 5,943,591 + QEN71_RS26625 0.69 -1.1 5,943,592 - QEN71_RS26625 0.69 -1.0 5,943,592 - QEN71_RS26625 0.69 -0.1 5,943,752 + QEN71_RS26625 0.86 -2.8 5,943,752 + QEN71_RS26625 0.86 -3.1 5,943,753 - QEN71_RS26625 0.86 -1.9 5,943,753 - QEN71_RS26625 0.86 -1.0 5,943,864 + -0.8 5,943,864 + -0.0 5,943,864 + -1.5 5,943,864 + -1.4 5,943,864 + -2.1 5,943,865 - -2.5 5,943,865 - -1.8 5,943,865 - -1.0 5,943,865 - -2.1 5,943,865 - -2.5 5,943,865 - -0.7 5,943,865 - -1.0 5,943,865 - -2.0 5,943,865 - -1.6 5,943,865 - -1.4 5,943,865 - -0.9 5,943,865 - -1.2 5,943,865 - -1.8 5,943,865 - -0.6 5,943,865 - -0.8 5,943,865 - -3.0 5,943,865 - -2.5 5,943,907 - +1.0 5,943,927 - -0.4 5,943,928 + -0.2 5,943,928 + -2.0 5,943,928 + -1.0 5,943,929 - -1.3 5,943,929 - -0.1 5,943,929 - -1.7 5,943,929 - -0.3 5,943,929 - -0.6 5,943,929 - -0.6 5,943,929 - -2.1 5,943,929 - -0.3 5,943,929 - -1.2 5,943,929 - -1.5 5,943,929 - -0.3 5,943,934 + -0.1 5,943,934 + -0.7 5,943,934 + -0.7 5,943,934 + -0.2 5,943,935 - -1.2 5,943,935 - +2.0 5,944,024 + -1.0 5,944,024 + -0.2 5,944,025 - +1.0 5,944,772 - QEN71_RS26630 0.34 -0.0
Or see this region's nucleotide sequence