Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26190 and QEN71_RS26195 are separated by 120 nucleotides QEN71_RS26195 and QEN71_RS26200 are separated by 45 nucleotides QEN71_RS26200 and QEN71_RS26205 are separated by 27 nucleotides QEN71_RS26205 and QEN71_RS26210 are separated by 23 nucleotides QEN71_RS26210 and QEN71_RS26215 overlap by 4 nucleotides
QEN71_RS26190: QEN71_RS26190 - DUF883 family protein, at 5,842,168 to 5,842,470
_RS26190
QEN71_RS26195: QEN71_RS26195 - phage holin family protein, at 5,842,591 to 5,842,974
_RS26195
QEN71_RS26200: QEN71_RS26200 - DUF3318 domain-containing protein, at 5,843,020 to 5,843,505
_RS26200
QEN71_RS26205: QEN71_RS26205 - type IV pilin protein, at 5,843,533 to 5,843,950
_RS26205
QEN71_RS26210: QEN71_RS26210 - hypothetical protein, at 5,843,974 to 5,844,498
_RS26210
QEN71_RS26215: QEN71_RS26215 - PilW family protein, at 5,844,495 to 5,845,253
_RS26215
Position (kb) 5843
5844 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5842.083 kb on + strand at 5842.131 kb on + strand at 5842.132 kb on - strand at 5842.132 kb on - strand at 5842.144 kb on + strand at 5842.144 kb on + strand at 5842.215 kb on - strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.468 kb on + strand at 5842.468 kb on + strand at 5842.469 kb on - strand at 5842.469 kb on - strand at 5842.553 kb on + strand at 5842.553 kb on + strand at 5842.553 kb on + strand at 5842.554 kb on - strand at 5842.554 kb on - strand at 5842.554 kb on - strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.580 kb on - strand at 5842.599 kb on + strand at 5842.600 kb on - strand at 5842.816 kb on + strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.852 kb on + strand, within QEN71_RS26195 at 5842.853 kb on - strand, within QEN71_RS26195 at 5842.853 kb on - strand, within QEN71_RS26195 at 5842.853 kb on - strand, within QEN71_RS26195 at 5843.238 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.490 kb on + strand at 5843.490 kb on + strand at 5843.491 kb on - strand at 5843.491 kb on - strand at 5843.534 kb on + strand at 5843.534 kb on + strand at 5843.534 kb on + strand at 5843.534 kb on + strand at 5843.534 kb on + strand at 5843.534 kb on + strand at 5843.534 kb on + strand at 5843.535 kb on - strand at 5843.535 kb on - strand at 5843.535 kb on - strand at 5843.535 kb on - strand at 5843.609 kb on - strand, within QEN71_RS26205 at 5843.648 kb on + strand, within QEN71_RS26205 at 5843.648 kb on + strand, within QEN71_RS26205 at 5843.649 kb on - strand, within QEN71_RS26205 at 5843.670 kb on + strand, within QEN71_RS26205 at 5843.684 kb on - strand, within QEN71_RS26205 at 5843.684 kb on - strand, within QEN71_RS26205 at 5843.712 kb on + strand, within QEN71_RS26205 at 5843.859 kb on + strand, within QEN71_RS26205 at 5843.867 kb on + strand, within QEN71_RS26205 at 5843.906 kb on + strand, within QEN71_RS26205 at 5843.906 kb on + strand, within QEN71_RS26205 at 5843.907 kb on - strand, within QEN71_RS26205 at 5843.921 kb on + strand at 5843.922 kb on - strand at 5843.938 kb on + strand at 5843.939 kb on - strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.962 kb on + strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5843.963 kb on - strand at 5844.077 kb on + strand, within QEN71_RS26210 at 5844.077 kb on + strand, within QEN71_RS26210 at 5844.077 kb on + strand, within QEN71_RS26210 at 5844.078 kb on - strand, within QEN71_RS26210 at 5844.078 kb on - strand, within QEN71_RS26210 at 5844.098 kb on + strand, within QEN71_RS26210 at 5844.098 kb on + strand, within QEN71_RS26210 at 5844.098 kb on + strand, within QEN71_RS26210 at 5844.098 kb on + strand, within QEN71_RS26210 at 5844.098 kb on + strand, within QEN71_RS26210 at 5844.098 kb on + strand, within QEN71_RS26210 at 5844.099 kb on - strand, within QEN71_RS26210 at 5844.099 kb on - strand, within QEN71_RS26210 at 5844.099 kb on - strand, within QEN71_RS26210 at 5844.099 kb on - strand, within QEN71_RS26210 at 5844.099 kb on - strand, within QEN71_RS26210 at 5844.173 kb on - strand, within QEN71_RS26210 at 5844.173 kb on - strand, within QEN71_RS26210 at 5844.174 kb on + strand, within QEN71_RS26210 at 5844.174 kb on + strand, within QEN71_RS26210 at 5844.174 kb on + strand, within QEN71_RS26210 at 5844.174 kb on + strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.175 kb on - strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.344 kb on + strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.345 kb on - strand, within QEN71_RS26210 at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.500 kb on + strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.501 kb on - strand at 5844.503 kb on + strand at 5844.503 kb on + strand at 5844.503 kb on + strand at 5844.503 kb on + strand at 5844.503 kb on + strand at 5844.503 kb on + strand at 5844.503 kb on + strand at 5844.503 kb on + strand at 5844.504 kb on - strand at 5844.504 kb on - strand at 5844.504 kb on - strand at 5844.504 kb on - strand at 5844.504 kb on - strand at 5844.504 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 5,842,083 + -1.0 5,842,131 + -0.2 5,842,132 - -1.3 5,842,132 - +1.3 5,842,144 + -1.6 5,842,144 + -0.5 5,842,215 - QEN71_RS26190 0.16 -1.2 5,842,387 + QEN71_RS26190 0.72 +1.1 5,842,387 + QEN71_RS26190 0.72 -3.1 5,842,387 + QEN71_RS26190 0.72 -1.5 5,842,387 + QEN71_RS26190 0.72 -1.4 5,842,387 + QEN71_RS26190 0.72 -1.0 5,842,387 + QEN71_RS26190 0.72 -0.3 5,842,387 + QEN71_RS26190 0.72 -2.6 5,842,387 + QEN71_RS26190 0.72 +0.3 5,842,388 - QEN71_RS26190 0.73 -1.4 5,842,388 - QEN71_RS26190 0.73 -2.7 5,842,388 - QEN71_RS26190 0.73 -3.5 5,842,388 - QEN71_RS26190 0.73 +0.1 5,842,388 - QEN71_RS26190 0.73 +0.3 5,842,388 - QEN71_RS26190 0.73 +1.7 5,842,468 + +0.1 5,842,468 + -0.3 5,842,469 - -0.6 5,842,469 - -1.2 5,842,553 + -0.1 5,842,553 + -0.3 5,842,553 + +0.4 5,842,554 - -0.7 5,842,554 - -0.3 5,842,554 - -1.3 5,842,579 + -0.8 5,842,579 + +1.0 5,842,579 + -2.5 5,842,579 + -0.4 5,842,579 + +0.8 5,842,579 + -0.1 5,842,580 - -1.0 5,842,599 + -0.8 5,842,600 - -2.3 5,842,816 + QEN71_RS26195 0.59 -1.0 5,842,817 - QEN71_RS26195 0.59 -0.3 5,842,817 - QEN71_RS26195 0.59 +1.0 5,842,817 - QEN71_RS26195 0.59 -0.8 5,842,817 - QEN71_RS26195 0.59 -0.0 5,842,817 - QEN71_RS26195 0.59 -2.4 5,842,852 + QEN71_RS26195 0.68 +1.1 5,842,853 - QEN71_RS26195 0.68 -2.2 5,842,853 - QEN71_RS26195 0.68 -0.6 5,842,853 - QEN71_RS26195 0.68 -1.6 5,843,238 + QEN71_RS26200 0.45 -1.8 5,843,428 + QEN71_RS26200 0.84 -0.2 5,843,428 + QEN71_RS26200 0.84 -0.6 5,843,428 + QEN71_RS26200 0.84 -2.0 5,843,428 + QEN71_RS26200 0.84 -1.4 5,843,428 + QEN71_RS26200 0.84 -3.1 5,843,429 - QEN71_RS26200 0.84 +1.0 5,843,429 - QEN71_RS26200 0.84 -2.2 5,843,429 - QEN71_RS26200 0.84 -1.3 5,843,429 - QEN71_RS26200 0.84 -0.0 5,843,429 - QEN71_RS26200 0.84 -1.7 5,843,490 + +0.2 5,843,490 + -0.3 5,843,491 - -0.7 5,843,491 - -0.5 5,843,534 + +2.0 5,843,534 + +0.9 5,843,534 + -2.3 5,843,534 + +0.5 5,843,534 + +0.7 5,843,534 + +0.9 5,843,534 + +0.6 5,843,535 - +0.4 5,843,535 - -0.0 5,843,535 - -0.0 5,843,535 - -0.7 5,843,609 - QEN71_RS26205 0.18 -0.6 5,843,648 + QEN71_RS26205 0.28 -1.9 5,843,648 + QEN71_RS26205 0.28 -1.7 5,843,649 - QEN71_RS26205 0.28 +0.7 5,843,670 + QEN71_RS26205 0.33 -1.6 5,843,684 - QEN71_RS26205 0.36 +0.6 5,843,684 - QEN71_RS26205 0.36 -2.7 5,843,712 + QEN71_RS26205 0.43 +0.1 5,843,859 + QEN71_RS26205 0.78 +1.5 5,843,867 + QEN71_RS26205 0.80 +1.2 5,843,906 + QEN71_RS26205 0.89 +0.2 5,843,906 + QEN71_RS26205 0.89 +0.4 5,843,907 - QEN71_RS26205 0.89 -0.1 5,843,921 + +1.1 5,843,922 - -1.2 5,843,938 + -0.3 5,843,939 - -0.6 5,843,962 + +0.0 5,843,962 + -0.7 5,843,962 + -0.7 5,843,962 + +0.6 5,843,962 + -0.6 5,843,962 + -0.8 5,843,962 + -0.6 5,843,962 + -0.8 5,843,962 + -0.0 5,843,962 + -0.9 5,843,962 + -0.8 5,843,962 + -0.0 5,843,962 + +1.4 5,843,963 - -0.8 5,843,963 - +0.5 5,843,963 - +0.1 5,843,963 - +0.8 5,843,963 - -0.4 5,843,963 - -0.9 5,843,963 - +0.3 5,843,963 - +0.3 5,843,963 - -0.2 5,844,077 + QEN71_RS26210 0.20 -0.3 5,844,077 + QEN71_RS26210 0.20 +1.1 5,844,077 + QEN71_RS26210 0.20 +0.1 5,844,078 - QEN71_RS26210 0.20 +0.0 5,844,078 - QEN71_RS26210 0.20 +1.1 5,844,098 + QEN71_RS26210 0.24 +0.2 5,844,098 + QEN71_RS26210 0.24 -0.1 5,844,098 + QEN71_RS26210 0.24 -0.0 5,844,098 + QEN71_RS26210 0.24 -0.7 5,844,098 + QEN71_RS26210 0.24 -0.1 5,844,098 + QEN71_RS26210 0.24 -0.2 5,844,099 - QEN71_RS26210 0.24 -0.3 5,844,099 - QEN71_RS26210 0.24 -0.9 5,844,099 - QEN71_RS26210 0.24 -0.2 5,844,099 - QEN71_RS26210 0.24 +0.5 5,844,099 - QEN71_RS26210 0.24 -0.8 5,844,173 - QEN71_RS26210 0.38 -1.5 5,844,173 - QEN71_RS26210 0.38 +3.1 5,844,174 + QEN71_RS26210 0.38 -0.9 5,844,174 + QEN71_RS26210 0.38 +0.0 5,844,174 + QEN71_RS26210 0.38 -0.0 5,844,174 + QEN71_RS26210 0.38 +0.8 5,844,175 - QEN71_RS26210 0.38 -0.0 5,844,175 - QEN71_RS26210 0.38 +1.0 5,844,175 - QEN71_RS26210 0.38 +0.3 5,844,175 - QEN71_RS26210 0.38 +0.1 5,844,175 - QEN71_RS26210 0.38 -0.3 5,844,175 - QEN71_RS26210 0.38 +0.0 5,844,175 - QEN71_RS26210 0.38 +1.0 5,844,175 - QEN71_RS26210 0.38 -1.3 5,844,175 - QEN71_RS26210 0.38 -1.4 5,844,175 - QEN71_RS26210 0.38 -0.2 5,844,344 + QEN71_RS26210 0.70 -0.7 5,844,344 + QEN71_RS26210 0.70 -0.8 5,844,344 + QEN71_RS26210 0.70 -0.4 5,844,344 + QEN71_RS26210 0.70 -1.2 5,844,344 + QEN71_RS26210 0.70 +0.9 5,844,344 + QEN71_RS26210 0.70 +0.3 5,844,344 + QEN71_RS26210 0.70 +0.3 5,844,344 + QEN71_RS26210 0.70 -0.2 5,844,345 - QEN71_RS26210 0.71 -1.3 5,844,345 - QEN71_RS26210 0.71 -0.8 5,844,345 - QEN71_RS26210 0.71 +0.7 5,844,345 - QEN71_RS26210 0.71 +0.5 5,844,345 - QEN71_RS26210 0.71 +0.2 5,844,345 - QEN71_RS26210 0.71 -0.3 5,844,345 - QEN71_RS26210 0.71 -0.2 5,844,345 - QEN71_RS26210 0.71 +0.1 5,844,500 + -0.0 5,844,500 + -0.3 5,844,500 + -1.1 5,844,500 + +0.1 5,844,500 + -0.0 5,844,500 + -0.3 5,844,500 + -0.6 5,844,500 + -0.0 5,844,500 + +0.2 5,844,500 + -0.3 5,844,500 + +0.7 5,844,500 + -0.8 5,844,500 + -1.0 5,844,501 - +0.6 5,844,501 - -0.8 5,844,501 - -0.1 5,844,501 - -1.2 5,844,501 - -0.0 5,844,501 - +0.7 5,844,501 - +0.3 5,844,501 - -2.1 5,844,501 - -0.9 5,844,501 - -0.2 5,844,501 - -0.2 5,844,501 - +2.0 5,844,501 - -0.2 5,844,501 - -0.4 5,844,503 + -1.3 5,844,503 + -1.0 5,844,503 + +0.2 5,844,503 + +1.0 5,844,503 + -0.8 5,844,503 + -0.6 5,844,503 + -1.1 5,844,503 + -0.7 5,844,504 - -0.6 5,844,504 - -1.1 5,844,504 - -0.9 5,844,504 - +0.5 5,844,504 - -0.5 5,844,504 - -0.6
Or see this region's nucleotide sequence