Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25545 and QEN71_RS25550 are separated by 516 nucleotides QEN71_RS25550 and QEN71_RS25555 are separated by 89 nucleotides
QEN71_RS25545: QEN71_RS25545 - hypothetical protein, at 5,685,200 to 5,686,126
_RS25545
QEN71_RS25550: QEN71_RS25550 - hypothetical protein, at 5,686,643 to 5,686,921
_RS25550
QEN71_RS25555: QEN71_RS25555 - AAA family ATPase, at 5,687,011 to 5,688,996
_RS25555
Position (kb) 5686
5687 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5685.666 kb on - strand, within QEN71_RS25545 at 5685.682 kb on + strand, within QEN71_RS25545 at 5685.857 kb on + strand, within QEN71_RS25545 at 5685.877 kb on + strand, within QEN71_RS25545 at 5685.878 kb on - strand, within QEN71_RS25545 at 5685.878 kb on - strand, within QEN71_RS25545 at 5685.878 kb on - strand, within QEN71_RS25545 at 5685.881 kb on + strand, within QEN71_RS25545 at 5685.881 kb on + strand, within QEN71_RS25545 at 5686.046 kb on + strand at 5686.047 kb on - strand at 5686.127 kb on - strand at 5686.426 kb on + strand at 5686.426 kb on + strand at 5686.426 kb on + strand at 5686.427 kb on - strand at 5686.427 kb on - strand at 5686.474 kb on + strand at 5686.617 kb on - strand at 5686.671 kb on + strand, within QEN71_RS25550 at 5686.692 kb on - strand, within QEN71_RS25550 at 5686.923 kb on - strand at 5686.948 kb on + strand at 5686.948 kb on + strand at 5686.948 kb on + strand at 5686.949 kb on - strand at 5686.949 kb on - strand at 5686.995 kb on - strand at 5686.995 kb on - strand at 5687.012 kb on + strand at 5687.104 kb on + strand at 5687.105 kb on - strand at 5687.179 kb on - strand at 5687.210 kb on + strand, within QEN71_RS25555 at 5687.210 kb on + strand, within QEN71_RS25555 at 5687.211 kb on - strand, within QEN71_RS25555 at 5687.211 kb on - strand, within QEN71_RS25555 at 5687.211 kb on - strand, within QEN71_RS25555 at 5687.215 kb on - strand, within QEN71_RS25555 at 5687.215 kb on - strand, within QEN71_RS25555 at 5687.249 kb on + strand, within QEN71_RS25555 at 5687.250 kb on - strand, within QEN71_RS25555 at 5687.342 kb on + strand, within QEN71_RS25555 at 5687.360 kb on + strand, within QEN71_RS25555 at 5687.360 kb on + strand, within QEN71_RS25555 at 5687.434 kb on - strand, within QEN71_RS25555 at 5687.459 kb on - strand, within QEN71_RS25555 at 5687.722 kb on - strand, within QEN71_RS25555 at 5687.743 kb on - strand, within QEN71_RS25555 at 5687.743 kb on - strand, within QEN71_RS25555 at 5687.743 kb on - strand, within QEN71_RS25555 at 5687.744 kb on - strand, within QEN71_RS25555 at 5687.787 kb on + strand, within QEN71_RS25555 at 5687.828 kb on + strand, within QEN71_RS25555 at 5687.828 kb on + strand, within QEN71_RS25555 at 5687.828 kb on + strand, within QEN71_RS25555 at 5687.868 kb on + strand, within QEN71_RS25555 at 5687.869 kb on - strand, within QEN71_RS25555
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 5,685,666 - QEN71_RS25545 0.50 -0.0 5,685,682 + QEN71_RS25545 0.52 -0.0 5,685,857 + QEN71_RS25545 0.71 -0.3 5,685,877 + QEN71_RS25545 0.73 -0.8 5,685,878 - QEN71_RS25545 0.73 -0.2 5,685,878 - QEN71_RS25545 0.73 -0.3 5,685,878 - QEN71_RS25545 0.73 -0.3 5,685,881 + QEN71_RS25545 0.73 +1.1 5,685,881 + QEN71_RS25545 0.73 +0.8 5,686,046 + +2.0 5,686,047 - -1.6 5,686,127 - -0.0 5,686,426 + +1.2 5,686,426 + +2.3 5,686,426 + -1.1 5,686,427 - +0.1 5,686,427 - -0.0 5,686,474 + -1.8 5,686,617 - +0.4 5,686,671 + QEN71_RS25550 0.10 -0.8 5,686,692 - QEN71_RS25550 0.18 -1.2 5,686,923 - -0.2 5,686,948 + -0.8 5,686,948 + +0.1 5,686,948 + -1.3 5,686,949 - +0.1 5,686,949 - -1.1 5,686,995 - -0.5 5,686,995 - +0.4 5,687,012 + +0.9 5,687,104 + +0.6 5,687,105 - +0.2 5,687,179 - +0.7 5,687,210 + QEN71_RS25555 0.10 -1.8 5,687,210 + QEN71_RS25555 0.10 +0.1 5,687,211 - QEN71_RS25555 0.10 -0.0 5,687,211 - QEN71_RS25555 0.10 +0.4 5,687,211 - QEN71_RS25555 0.10 -0.9 5,687,215 - QEN71_RS25555 0.10 -0.2 5,687,215 - QEN71_RS25555 0.10 -0.3 5,687,249 + QEN71_RS25555 0.12 +0.6 5,687,250 - QEN71_RS25555 0.12 -0.7 5,687,342 + QEN71_RS25555 0.17 +0.1 5,687,360 + QEN71_RS25555 0.18 -0.9 5,687,360 + QEN71_RS25555 0.18 -0.5 5,687,434 - QEN71_RS25555 0.21 -0.0 5,687,459 - QEN71_RS25555 0.23 -0.4 5,687,722 - QEN71_RS25555 0.36 -0.8 5,687,743 - QEN71_RS25555 0.37 -0.5 5,687,743 - QEN71_RS25555 0.37 -0.3 5,687,743 - QEN71_RS25555 0.37 -0.9 5,687,744 - QEN71_RS25555 0.37 -0.3 5,687,787 + QEN71_RS25555 0.39 -0.9 5,687,828 + QEN71_RS25555 0.41 +0.6 5,687,828 + QEN71_RS25555 0.41 -0.9 5,687,828 + QEN71_RS25555 0.41 +1.0 5,687,868 + QEN71_RS25555 0.43 +0.0 5,687,869 - QEN71_RS25555 0.43 +2.0
Or see this region's nucleotide sequence