Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21835 and QEN71_RS21840 are separated by 87 nucleotides QEN71_RS21840 and QEN71_RS21845 are separated by 32 nucleotides QEN71_RS21845 and QEN71_RS21850 are separated by 64 nucleotides
QEN71_RS21835: QEN71_RS21835 - alpha/beta hydrolase, at 4,843,002 to 4,843,961
_RS21835
QEN71_RS21840: QEN71_RS21840 - SDR family oxidoreductase, at 4,844,049 to 4,844,918
_RS21840
QEN71_RS21845: QEN71_RS21845 - NADP-dependent oxidoreductase, at 4,844,951 to 4,845,949
_RS21845
QEN71_RS21850: QEN71_RS21850 - PaaI family thioesterase, at 4,846,014 to 4,846,487
_RS21850
Position (kb) 4844
4845
4846 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4844.051 kb on - strand at 4844.051 kb on - strand at 4844.051 kb on - strand at 4844.051 kb on - strand at 4844.099 kb on + strand at 4844.099 kb on + strand at 4844.099 kb on + strand at 4844.099 kb on + strand at 4844.100 kb on - strand at 4844.100 kb on - strand at 4844.100 kb on - strand at 4844.165 kb on + strand, within QEN71_RS21840 at 4844.165 kb on + strand, within QEN71_RS21840 at 4844.165 kb on + strand, within QEN71_RS21840 at 4844.166 kb on - strand, within QEN71_RS21840 at 4844.166 kb on - strand, within QEN71_RS21840 at 4844.166 kb on - strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.167 kb on + strand, within QEN71_RS21840 at 4844.168 kb on - strand, within QEN71_RS21840 at 4844.168 kb on - strand, within QEN71_RS21840 at 4844.168 kb on - strand, within QEN71_RS21840 at 4844.168 kb on - strand, within QEN71_RS21840 at 4844.297 kb on + strand, within QEN71_RS21840 at 4844.407 kb on + strand, within QEN71_RS21840 at 4844.407 kb on + strand, within QEN71_RS21840 at 4844.408 kb on - strand, within QEN71_RS21840 at 4844.408 kb on - strand, within QEN71_RS21840 at 4844.452 kb on + strand, within QEN71_RS21840 at 4844.452 kb on + strand, within QEN71_RS21840 at 4844.452 kb on + strand, within QEN71_RS21840 at 4844.452 kb on + strand, within QEN71_RS21840 at 4844.453 kb on - strand, within QEN71_RS21840 at 4844.453 kb on - strand, within QEN71_RS21840 at 4844.453 kb on - strand, within QEN71_RS21840 at 4844.453 kb on - strand, within QEN71_RS21840 at 4844.453 kb on - strand, within QEN71_RS21840 at 4844.499 kb on - strand, within QEN71_RS21840 at 4844.940 kb on + strand at 4844.940 kb on + strand at 4844.941 kb on - strand at 4845.115 kb on + strand, within QEN71_RS21845 at 4845.115 kb on + strand, within QEN71_RS21845 at 4845.115 kb on + strand, within QEN71_RS21845 at 4845.115 kb on + strand, within QEN71_RS21845 at 4845.115 kb on + strand, within QEN71_RS21845 at 4845.115 kb on + strand, within QEN71_RS21845 at 4845.116 kb on - strand, within QEN71_RS21845 at 4845.116 kb on - strand, within QEN71_RS21845 at 4845.116 kb on - strand, within QEN71_RS21845 at 4845.116 kb on - strand, within QEN71_RS21845 at 4845.337 kb on - strand, within QEN71_RS21845 at 4845.337 kb on - strand, within QEN71_RS21845 at 4845.354 kb on + strand, within QEN71_RS21845 at 4845.354 kb on + strand, within QEN71_RS21845 at 4845.393 kb on + strand, within QEN71_RS21845 at 4845.394 kb on - strand, within QEN71_RS21845 at 4845.394 kb on - strand, within QEN71_RS21845 at 4845.394 kb on - strand, within QEN71_RS21845 at 4845.394 kb on - strand, within QEN71_RS21845 at 4845.394 kb on - strand, within QEN71_RS21845 at 4845.394 kb on - strand, within QEN71_RS21845 at 4845.544 kb on - strand, within QEN71_RS21845 at 4845.582 kb on + strand, within QEN71_RS21845 at 4845.583 kb on - strand, within QEN71_RS21845 at 4845.750 kb on - strand, within QEN71_RS21845 at 4845.768 kb on + strand, within QEN71_RS21845 at 4845.769 kb on - strand, within QEN71_RS21845 at 4845.769 kb on - strand, within QEN71_RS21845 at 4845.799 kb on + strand, within QEN71_RS21845 at 4845.800 kb on - strand, within QEN71_RS21845 at 4845.800 kb on - strand, within QEN71_RS21845 at 4845.800 kb on - strand, within QEN71_RS21845 at 4845.801 kb on + strand, within QEN71_RS21845 at 4845.801 kb on + strand, within QEN71_RS21845 at 4845.801 kb on + strand, within QEN71_RS21845 at 4845.801 kb on + strand, within QEN71_RS21845 at 4845.801 kb on + strand, within QEN71_RS21845 at 4845.801 kb on + strand, within QEN71_RS21845 at 4845.801 kb on + strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.802 kb on - strand, within QEN71_RS21845 at 4845.819 kb on + strand, within QEN71_RS21845 at 4845.819 kb on + strand, within QEN71_RS21845 at 4845.819 kb on + strand, within QEN71_RS21845 at 4845.819 kb on + strand, within QEN71_RS21845 at 4845.820 kb on - strand, within QEN71_RS21845 at 4845.968 kb on + strand at 4845.968 kb on + strand at 4845.969 kb on - strand at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.102 kb on + strand, within QEN71_RS21850 at 4846.103 kb on - strand, within QEN71_RS21850 at 4846.103 kb on - strand, within QEN71_RS21850 at 4846.103 kb on - strand, within QEN71_RS21850 at 4846.103 kb on - strand, within QEN71_RS21850 at 4846.103 kb on - strand, within QEN71_RS21850 at 4846.168 kb on + strand, within QEN71_RS21850 at 4846.168 kb on + strand, within QEN71_RS21850 at 4846.168 kb on + strand, within QEN71_RS21850 at 4846.169 kb on - strand, within QEN71_RS21850 at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.487 kb on + strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.488 kb on - strand at 4846.495 kb on + strand at 4846.495 kb on + strand at 4846.495 kb on + strand at 4846.495 kb on + strand at 4846.495 kb on + strand at 4846.495 kb on + strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.496 kb on - strand at 4846.571 kb on - strand at 4846.599 kb on + strand at 4846.599 kb on + strand at 4846.599 kb on + strand at 4846.599 kb on + strand at 4846.599 kb on + strand at 4846.599 kb on + strand at 4846.600 kb on - strand at 4846.600 kb on - strand at 4846.600 kb on - strand at 4846.600 kb on - strand at 4846.638 kb on + strand at 4846.638 kb on + strand at 4846.639 kb on - strand at 4846.698 kb on + strand at 4846.699 kb on - strand at 4846.792 kb on + strand at 4846.792 kb on + strand at 4846.792 kb on + strand at 4846.793 kb on - strand at 4846.793 kb on - strand at 4846.794 kb on + strand at 4846.794 kb on + strand at 4846.859 kb on + strand at 4846.859 kb on + strand at 4846.859 kb on + strand at 4846.860 kb on - strand at 4846.860 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 4,844,051 - +1.8 4,844,051 - -0.2 4,844,051 - +0.6 4,844,051 - +1.2 4,844,099 + +0.2 4,844,099 + +0.2 4,844,099 + -1.4 4,844,099 + -0.9 4,844,100 - -0.4 4,844,100 - -1.0 4,844,100 - -0.4 4,844,165 + QEN71_RS21840 0.13 -0.5 4,844,165 + QEN71_RS21840 0.13 -0.5 4,844,165 + QEN71_RS21840 0.13 -1.1 4,844,166 - QEN71_RS21840 0.13 +0.4 4,844,166 - QEN71_RS21840 0.13 -0.7 4,844,166 - QEN71_RS21840 0.13 -0.4 4,844,167 + QEN71_RS21840 0.14 -0.3 4,844,167 + QEN71_RS21840 0.14 +2.0 4,844,167 + QEN71_RS21840 0.14 -0.4 4,844,167 + QEN71_RS21840 0.14 -0.6 4,844,167 + QEN71_RS21840 0.14 -0.2 4,844,167 + QEN71_RS21840 0.14 -0.6 4,844,167 + QEN71_RS21840 0.14 -1.6 4,844,167 + QEN71_RS21840 0.14 +0.7 4,844,167 + QEN71_RS21840 0.14 -2.2 4,844,168 - QEN71_RS21840 0.14 +0.7 4,844,168 - QEN71_RS21840 0.14 -1.3 4,844,168 - QEN71_RS21840 0.14 -0.6 4,844,168 - QEN71_RS21840 0.14 +1.3 4,844,297 + QEN71_RS21840 0.29 +0.9 4,844,407 + QEN71_RS21840 0.41 +0.8 4,844,407 + QEN71_RS21840 0.41 -0.9 4,844,408 - QEN71_RS21840 0.41 -1.0 4,844,408 - QEN71_RS21840 0.41 +0.8 4,844,452 + QEN71_RS21840 0.46 -1.5 4,844,452 + QEN71_RS21840 0.46 -0.3 4,844,452 + QEN71_RS21840 0.46 -2.0 4,844,452 + QEN71_RS21840 0.46 -0.8 4,844,453 - QEN71_RS21840 0.46 +0.7 4,844,453 - QEN71_RS21840 0.46 -0.6 4,844,453 - QEN71_RS21840 0.46 -0.1 4,844,453 - QEN71_RS21840 0.46 +0.0 4,844,453 - QEN71_RS21840 0.46 +1.5 4,844,499 - QEN71_RS21840 0.52 -0.7 4,844,940 + +0.3 4,844,940 + -0.1 4,844,941 - +0.1 4,845,115 + QEN71_RS21845 0.16 -0.6 4,845,115 + QEN71_RS21845 0.16 -0.5 4,845,115 + QEN71_RS21845 0.16 +0.9 4,845,115 + QEN71_RS21845 0.16 -0.4 4,845,115 + QEN71_RS21845 0.16 -0.4 4,845,115 + QEN71_RS21845 0.16 +1.0 4,845,116 - QEN71_RS21845 0.17 -0.9 4,845,116 - QEN71_RS21845 0.17 -1.6 4,845,116 - QEN71_RS21845 0.17 -0.0 4,845,116 - QEN71_RS21845 0.17 +1.2 4,845,337 - QEN71_RS21845 0.39 -2.0 4,845,337 - QEN71_RS21845 0.39 +1.7 4,845,354 + QEN71_RS21845 0.40 -1.9 4,845,354 + QEN71_RS21845 0.40 +0.5 4,845,393 + QEN71_RS21845 0.44 -1.0 4,845,394 - QEN71_RS21845 0.44 +0.0 4,845,394 - QEN71_RS21845 0.44 -0.5 4,845,394 - QEN71_RS21845 0.44 -0.2 4,845,394 - QEN71_RS21845 0.44 +1.7 4,845,394 - QEN71_RS21845 0.44 -0.4 4,845,394 - QEN71_RS21845 0.44 -0.9 4,845,544 - QEN71_RS21845 0.59 -0.0 4,845,582 + QEN71_RS21845 0.63 -0.7 4,845,583 - QEN71_RS21845 0.63 +0.8 4,845,750 - QEN71_RS21845 0.80 +0.1 4,845,768 + QEN71_RS21845 0.82 +2.3 4,845,769 - QEN71_RS21845 0.82 -0.6 4,845,769 - QEN71_RS21845 0.82 +0.7 4,845,799 + QEN71_RS21845 0.85 +0.0 4,845,800 - QEN71_RS21845 0.85 -0.6 4,845,800 - QEN71_RS21845 0.85 -0.2 4,845,800 - QEN71_RS21845 0.85 -0.4 4,845,801 + QEN71_RS21845 0.85 -0.8 4,845,801 + QEN71_RS21845 0.85 +0.1 4,845,801 + QEN71_RS21845 0.85 -0.4 4,845,801 + QEN71_RS21845 0.85 +0.2 4,845,801 + QEN71_RS21845 0.85 -2.2 4,845,801 + QEN71_RS21845 0.85 -0.5 4,845,801 + QEN71_RS21845 0.85 -0.1 4,845,802 - QEN71_RS21845 0.85 +0.6 4,845,802 - QEN71_RS21845 0.85 +0.7 4,845,802 - QEN71_RS21845 0.85 -0.4 4,845,802 - QEN71_RS21845 0.85 +1.1 4,845,802 - QEN71_RS21845 0.85 -0.1 4,845,802 - QEN71_RS21845 0.85 -1.1 4,845,802 - QEN71_RS21845 0.85 -1.0 4,845,802 - QEN71_RS21845 0.85 +0.6 4,845,802 - QEN71_RS21845 0.85 -0.2 4,845,819 + QEN71_RS21845 0.87 +0.1 4,845,819 + QEN71_RS21845 0.87 -1.1 4,845,819 + QEN71_RS21845 0.87 -1.7 4,845,819 + QEN71_RS21845 0.87 +0.1 4,845,820 - QEN71_RS21845 0.87 +0.0 4,845,968 + -1.1 4,845,968 + -0.1 4,845,969 - -0.9 4,846,102 + QEN71_RS21850 0.19 +0.3 4,846,102 + QEN71_RS21850 0.19 -0.1 4,846,102 + QEN71_RS21850 0.19 +1.5 4,846,102 + QEN71_RS21850 0.19 -0.4 4,846,102 + QEN71_RS21850 0.19 +0.4 4,846,102 + QEN71_RS21850 0.19 +0.0 4,846,102 + QEN71_RS21850 0.19 -0.1 4,846,102 + QEN71_RS21850 0.19 -0.4 4,846,102 + QEN71_RS21850 0.19 -0.4 4,846,102 + QEN71_RS21850 0.19 -1.6 4,846,102 + QEN71_RS21850 0.19 +0.1 4,846,102 + QEN71_RS21850 0.19 +1.0 4,846,102 + QEN71_RS21850 0.19 +0.3 4,846,102 + QEN71_RS21850 0.19 +2.1 4,846,102 + QEN71_RS21850 0.19 +0.9 4,846,102 + QEN71_RS21850 0.19 +1.1 4,846,102 + QEN71_RS21850 0.19 +0.3 4,846,102 + QEN71_RS21850 0.19 -0.5 4,846,102 + QEN71_RS21850 0.19 +0.7 4,846,102 + QEN71_RS21850 0.19 +0.0 4,846,103 - QEN71_RS21850 0.19 -0.6 4,846,103 - QEN71_RS21850 0.19 +0.3 4,846,103 - QEN71_RS21850 0.19 +1.5 4,846,103 - QEN71_RS21850 0.19 +0.5 4,846,103 - QEN71_RS21850 0.19 +0.8 4,846,168 + QEN71_RS21850 0.32 +0.6 4,846,168 + QEN71_RS21850 0.32 -0.5 4,846,168 + QEN71_RS21850 0.32 -1.0 4,846,169 - QEN71_RS21850 0.33 -1.8 4,846,487 + +0.3 4,846,487 + -0.1 4,846,487 + +1.2 4,846,487 + -0.4 4,846,487 + +0.5 4,846,487 + -0.1 4,846,487 + +0.3 4,846,487 + -0.8 4,846,487 + -0.4 4,846,487 + -0.9 4,846,487 + +0.9 4,846,487 + +0.4 4,846,487 + +0.2 4,846,487 + +0.5 4,846,487 + +0.5 4,846,488 - -0.8 4,846,488 - +0.6 4,846,488 - -0.7 4,846,488 - -1.1 4,846,488 - +0.4 4,846,488 - -0.1 4,846,488 - +0.7 4,846,488 - -1.7 4,846,488 - +0.3 4,846,488 - -0.4 4,846,488 - -1.4 4,846,488 - -0.3 4,846,488 - -0.1 4,846,488 - -0.1 4,846,495 + -0.0 4,846,495 + +0.1 4,846,495 + +0.4 4,846,495 + +0.0 4,846,495 + -1.1 4,846,495 + -0.0 4,846,496 - -0.2 4,846,496 - +0.6 4,846,496 - -1.1 4,846,496 - -0.4 4,846,496 - +1.0 4,846,496 - -0.1 4,846,496 - -0.3 4,846,496 - +0.7 4,846,496 - -0.4 4,846,496 - -0.5 4,846,496 - -0.7 4,846,496 - +0.1 4,846,571 - -0.6 4,846,599 + -2.0 4,846,599 + -0.6 4,846,599 + +1.3 4,846,599 + -0.2 4,846,599 + -0.6 4,846,599 + -0.1 4,846,600 - -0.0 4,846,600 - +0.1 4,846,600 - +0.6 4,846,600 - +0.3 4,846,638 + -0.2 4,846,638 + -0.7 4,846,639 - +0.6 4,846,698 + +0.8 4,846,699 - -1.0 4,846,792 + +0.8 4,846,792 + -0.8 4,846,792 + -0.1 4,846,793 - +0.1 4,846,793 - +0.9 4,846,794 + +0.0 4,846,794 + -0.8 4,846,859 + +0.9 4,846,859 + -0.4 4,846,859 + +0.5 4,846,860 - +0.8 4,846,860 - +0.7
Or see this region's nucleotide sequence