Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21150 and QEN71_RS21155 are separated by 81 nucleotides QEN71_RS21155 and QEN71_RS21160 are separated by 21 nucleotides QEN71_RS21160 and QEN71_RS21165 are separated by 40 nucleotides
QEN71_RS21150: QEN71_RS21150 - LysR family transcriptional regulator, at 4,691,372 to 4,692,280
_RS21150
QEN71_RS21155: QEN71_RS21155 - acyl-CoA dehydrogenase family protein, at 4,692,362 to 4,693,612
_RS21155
QEN71_RS21160: QEN71_RS21160 - SDR family oxidoreductase, at 4,693,634 to 4,694,398
_RS21160
QEN71_RS21165: QEN71_RS21165 - phosphotransferase, at 4,694,439 to 4,695,467
_RS21165
Position (kb)
4692
4693
4694 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4691.373 kb on + strand at 4691.373 kb on + strand at 4691.466 kb on + strand, within QEN71_RS21150 at 4691.466 kb on + strand, within QEN71_RS21150 at 4691.467 kb on - strand, within QEN71_RS21150 at 4691.467 kb on - strand, within QEN71_RS21150 at 4691.524 kb on - strand, within QEN71_RS21150 at 4691.595 kb on + strand, within QEN71_RS21150 at 4691.595 kb on + strand, within QEN71_RS21150 at 4691.595 kb on + strand, within QEN71_RS21150 at 4691.595 kb on + strand, within QEN71_RS21150 at 4691.595 kb on + strand, within QEN71_RS21150 at 4691.595 kb on + strand, within QEN71_RS21150 at 4691.595 kb on + strand, within QEN71_RS21150 at 4691.596 kb on - strand, within QEN71_RS21150 at 4691.596 kb on - strand, within QEN71_RS21150 at 4691.596 kb on - strand, within QEN71_RS21150 at 4691.596 kb on - strand, within QEN71_RS21150 at 4691.596 kb on - strand, within QEN71_RS21150 at 4691.596 kb on - strand, within QEN71_RS21150 at 4691.596 kb on - strand, within QEN71_RS21150 at 4691.709 kb on + strand, within QEN71_RS21150 at 4692.308 kb on + strand at 4692.309 kb on - strand at 4692.309 kb on - strand at 4692.322 kb on + strand at 4692.387 kb on + strand at 4692.387 kb on + strand at 4692.387 kb on + strand at 4692.388 kb on - strand at 4692.388 kb on - strand at 4692.388 kb on - strand at 4692.388 kb on - strand at 4692.744 kb on + strand, within QEN71_RS21155 at 4692.744 kb on + strand, within QEN71_RS21155 at 4692.744 kb on + strand, within QEN71_RS21155 at 4692.744 kb on + strand, within QEN71_RS21155 at 4692.744 kb on + strand, within QEN71_RS21155 at 4692.745 kb on - strand, within QEN71_RS21155 at 4692.745 kb on - strand, within QEN71_RS21155 at 4692.745 kb on - strand, within QEN71_RS21155 at 4692.745 kb on - strand, within QEN71_RS21155 at 4693.135 kb on - strand, within QEN71_RS21155 at 4693.629 kb on + strand at 4693.629 kb on + strand at 4693.629 kb on + strand at 4693.630 kb on - strand at 4693.630 kb on - strand at 4693.630 kb on - strand at 4693.630 kb on - strand at 4693.630 kb on - strand at 4693.630 kb on - strand at 4693.635 kb on + strand at 4693.635 kb on + strand at 4693.636 kb on - strand at 4693.678 kb on + strand at 4693.680 kb on + strand at 4693.681 kb on - strand at 4693.704 kb on + strand at 4693.704 kb on + strand at 4693.705 kb on - strand at 4693.775 kb on - strand, within QEN71_RS21160 at 4693.776 kb on + strand, within QEN71_RS21160 at 4693.776 kb on + strand, within QEN71_RS21160 at 4693.776 kb on + strand, within QEN71_RS21160 at 4693.776 kb on + strand, within QEN71_RS21160 at 4693.776 kb on + strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.777 kb on - strand, within QEN71_RS21160 at 4693.920 kb on + strand, within QEN71_RS21160 at 4693.920 kb on + strand, within QEN71_RS21160 at 4693.921 kb on - strand, within QEN71_RS21160 at 4693.921 kb on - strand, within QEN71_RS21160 at 4693.921 kb on - strand, within QEN71_RS21160 at 4694.031 kb on + strand, within QEN71_RS21160 at 4694.065 kb on - strand, within QEN71_RS21160 at 4694.089 kb on + strand, within QEN71_RS21160 at 4694.282 kb on + strand, within QEN71_RS21160 at 4694.282 kb on + strand, within QEN71_RS21160 at 4694.588 kb on - strand, within QEN71_RS21165
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 4,691,373 + -1.0 4,691,373 + +0.5 4,691,466 + QEN71_RS21150 0.10 -0.2 4,691,466 + QEN71_RS21150 0.10 -0.5 4,691,467 - QEN71_RS21150 0.10 -0.2 4,691,467 - QEN71_RS21150 0.10 -0.8 4,691,524 - QEN71_RS21150 0.17 -0.3 4,691,595 + QEN71_RS21150 0.25 +0.0 4,691,595 + QEN71_RS21150 0.25 -0.5 4,691,595 + QEN71_RS21150 0.25 -1.7 4,691,595 + QEN71_RS21150 0.25 -1.6 4,691,595 + QEN71_RS21150 0.25 +0.0 4,691,595 + QEN71_RS21150 0.25 +0.0 4,691,595 + QEN71_RS21150 0.25 -0.6 4,691,596 - QEN71_RS21150 0.25 +1.2 4,691,596 - QEN71_RS21150 0.25 -0.1 4,691,596 - QEN71_RS21150 0.25 -0.8 4,691,596 - QEN71_RS21150 0.25 -0.6 4,691,596 - QEN71_RS21150 0.25 -0.7 4,691,596 - QEN71_RS21150 0.25 +0.1 4,691,596 - QEN71_RS21150 0.25 -0.3 4,691,709 + QEN71_RS21150 0.37 -0.4 4,692,308 + -0.4 4,692,309 - +0.1 4,692,309 - +0.8 4,692,322 + +0.8 4,692,387 + +1.8 4,692,387 + +0.2 4,692,387 + -0.9 4,692,388 - -0.8 4,692,388 - -1.2 4,692,388 - -0.3 4,692,388 - -0.8 4,692,744 + QEN71_RS21155 0.31 -0.9 4,692,744 + QEN71_RS21155 0.31 -0.2 4,692,744 + QEN71_RS21155 0.31 -0.1 4,692,744 + QEN71_RS21155 0.31 -0.9 4,692,744 + QEN71_RS21155 0.31 -1.4 4,692,745 - QEN71_RS21155 0.31 -1.0 4,692,745 - QEN71_RS21155 0.31 -1.3 4,692,745 - QEN71_RS21155 0.31 -1.3 4,692,745 - QEN71_RS21155 0.31 -1.0 4,693,135 - QEN71_RS21155 0.62 -1.6 4,693,629 + -0.2 4,693,629 + -0.8 4,693,629 + -1.7 4,693,630 - -0.2 4,693,630 - -0.1 4,693,630 - +1.8 4,693,630 - +1.0 4,693,630 - -1.6 4,693,630 - +0.2 4,693,635 + -0.1 4,693,635 + +0.2 4,693,636 - -0.6 4,693,678 + +1.0 4,693,680 + +0.5 4,693,681 - -0.8 4,693,704 + +0.4 4,693,704 + -0.3 4,693,705 - -0.2 4,693,775 - QEN71_RS21160 0.18 +0.8 4,693,776 + QEN71_RS21160 0.19 +0.0 4,693,776 + QEN71_RS21160 0.19 -0.6 4,693,776 + QEN71_RS21160 0.19 +1.1 4,693,776 + QEN71_RS21160 0.19 +0.1 4,693,776 + QEN71_RS21160 0.19 -0.2 4,693,777 - QEN71_RS21160 0.19 -1.1 4,693,777 - QEN71_RS21160 0.19 -0.6 4,693,777 - QEN71_RS21160 0.19 -0.1 4,693,777 - QEN71_RS21160 0.19 +0.8 4,693,777 - QEN71_RS21160 0.19 +0.2 4,693,777 - QEN71_RS21160 0.19 -0.2 4,693,777 - QEN71_RS21160 0.19 +0.2 4,693,777 - QEN71_RS21160 0.19 +0.6 4,693,920 + QEN71_RS21160 0.37 -0.8 4,693,920 + QEN71_RS21160 0.37 -0.6 4,693,921 - QEN71_RS21160 0.38 +0.4 4,693,921 - QEN71_RS21160 0.38 +0.0 4,693,921 - QEN71_RS21160 0.38 -0.8 4,694,031 + QEN71_RS21160 0.52 -0.7 4,694,065 - QEN71_RS21160 0.56 -2.3 4,694,089 + QEN71_RS21160 0.59 +0.4 4,694,282 + QEN71_RS21160 0.85 -0.4 4,694,282 + QEN71_RS21160 0.85 -1.2 4,694,588 - QEN71_RS21165 0.14 +0.4
Or see this region's nucleotide sequence