Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS20150 and QEN71_RS20155 are separated by 197 nucleotides QEN71_RS20155 and QEN71_RS20160 are separated by 38 nucleotides QEN71_RS20160 and QEN71_RS20165 are separated by 89 nucleotides QEN71_RS20165 and QEN71_RS20170 are separated by 122 nucleotides
QEN71_RS20150: QEN71_RS20150 - hypothetical protein, at 4,485,460 to 4,485,714
_RS20150
QEN71_RS20155: QEN71_RS20155 - nuclear transport factor 2 family protein, at 4,485,912 to 4,486,280
_RS20155
QEN71_RS20160: QEN71_RS20160 - hypothetical protein, at 4,486,319 to 4,486,559
_RS20160
QEN71_RS20165: QEN71_RS20165 - hypothetical protein, at 4,486,649 to 4,486,987
_RS20165
QEN71_RS20170: QEN71_RS20170 - tetratricopeptide repeat-containing glycosyltransferase family protein, at 4,487,110 to 4,488,672
_RS20170
Position (kb) 4486
4487 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4485.734 kb on - strand at 4485.796 kb on + strand at 4485.796 kb on + strand at 4485.796 kb on + strand at 4485.797 kb on - strand at 4485.808 kb on - strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.924 kb on - strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.531 kb on - strand, within QEN71_RS20160 at 4486.579 kb on + strand at 4486.579 kb on + strand at 4486.579 kb on + strand at 4486.579 kb on + strand at 4486.580 kb on - strand at 4486.784 kb on + strand, within QEN71_RS20165 at 4486.784 kb on + strand, within QEN71_RS20165 at 4486.785 kb on - strand, within QEN71_RS20165 at 4487.036 kb on - strand at 4487.036 kb on - strand at 4487.053 kb on + strand at 4487.054 kb on - strand at 4487.054 kb on - strand at 4487.054 kb on - strand at 4487.170 kb on + strand at 4487.170 kb on + strand at 4487.170 kb on + strand at 4487.170 kb on + strand at 4487.171 kb on - strand at 4487.171 kb on - strand at 4487.171 kb on - strand at 4487.171 kb on - strand at 4487.248 kb on + strand at 4487.248 kb on + strand at 4487.248 kb on + strand at 4487.249 kb on - strand at 4487.249 kb on - strand at 4487.273 kb on - strand, within QEN71_RS20170 at 4487.290 kb on + strand, within QEN71_RS20170 at 4487.290 kb on + strand, within QEN71_RS20170 at 4487.290 kb on + strand, within QEN71_RS20170 at 4487.291 kb on - strand, within QEN71_RS20170 at 4487.291 kb on - strand, within QEN71_RS20170 at 4487.542 kb on + strand, within QEN71_RS20170 at 4487.542 kb on + strand, within QEN71_RS20170 at 4487.543 kb on - strand, within QEN71_RS20170 at 4487.543 kb on - strand, within QEN71_RS20170 at 4487.543 kb on - strand, within QEN71_RS20170 at 4487.578 kb on + strand, within QEN71_RS20170 at 4487.579 kb on - strand, within QEN71_RS20170 at 4487.579 kb on - strand, within QEN71_RS20170 at 4487.599 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.641 kb on + strand, within QEN71_RS20170 at 4487.642 kb on - strand, within QEN71_RS20170 at 4487.642 kb on - strand, within QEN71_RS20170 at 4487.714 kb on + strand, within QEN71_RS20170 at 4487.775 kb on - strand, within QEN71_RS20170 at 4487.775 kb on - strand, within QEN71_RS20170 at 4487.803 kb on + strand, within QEN71_RS20170 at 4487.803 kb on + strand, within QEN71_RS20170 at 4487.803 kb on + strand, within QEN71_RS20170 at 4487.804 kb on - strand, within QEN71_RS20170 at 4487.925 kb on + strand, within QEN71_RS20170
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 4,485,734 - -0.3 4,485,796 + +1.4 4,485,796 + -0.5 4,485,796 + -0.2 4,485,797 - +1.8 4,485,808 - -2.5 4,485,820 + +0.7 4,485,820 + +0.2 4,485,820 + -2.8 4,485,820 + -0.7 4,485,820 + -0.0 4,485,820 + -0.9 4,485,820 + +1.2 4,485,820 + -0.4 4,485,820 + -0.8 4,485,821 - -1.1 4,485,821 - +0.6 4,485,821 - +0.1 4,485,821 - -0.8 4,485,821 - -0.6 4,485,821 - -0.5 4,485,821 - +0.0 4,485,821 - +0.8 4,485,821 - -0.3 4,485,821 - +0.0 4,485,821 - -1.1 4,485,821 - +0.3 4,485,924 - +0.5 4,485,942 + -0.4 4,485,942 + -0.1 4,485,942 + +0.0 4,485,942 + -0.4 4,485,942 + +0.6 4,485,943 - -0.9 4,485,943 - -0.1 4,485,943 - +0.2 4,485,943 - -0.6 4,485,943 - -0.1 4,485,943 - +0.2 4,485,943 - -0.1 4,485,943 - -0.7 4,486,020 + QEN71_RS20155 0.29 -1.0 4,486,020 + QEN71_RS20155 0.29 +0.2 4,486,020 + QEN71_RS20155 0.29 -0.3 4,486,020 + QEN71_RS20155 0.29 -0.7 4,486,020 + QEN71_RS20155 0.29 -0.6 4,486,020 + QEN71_RS20155 0.29 +0.8 4,486,020 + QEN71_RS20155 0.29 +0.0 4,486,020 + QEN71_RS20155 0.29 -0.3 4,486,021 - QEN71_RS20155 0.30 -1.0 4,486,021 - QEN71_RS20155 0.30 -0.6 4,486,021 - QEN71_RS20155 0.30 -1.4 4,486,021 - QEN71_RS20155 0.30 +0.4 4,486,021 - QEN71_RS20155 0.30 -0.1 4,486,021 - QEN71_RS20155 0.30 -0.3 4,486,021 - QEN71_RS20155 0.30 -0.3 4,486,021 - QEN71_RS20155 0.30 +0.1 4,486,021 - QEN71_RS20155 0.30 +0.3 4,486,021 - QEN71_RS20155 0.30 -1.0 4,486,021 - QEN71_RS20155 0.30 -0.2 4,486,298 + -1.3 4,486,298 + +0.3 4,486,298 + +0.2 4,486,298 + +0.5 4,486,298 + -0.7 4,486,298 + -0.4 4,486,298 + +0.3 4,486,299 - +0.9 4,486,299 - -0.6 4,486,299 - +0.2 4,486,299 - +0.4 4,486,299 - +0.9 4,486,299 - +0.4 4,486,299 - -0.6 4,486,299 - -0.4 4,486,299 - -0.6 4,486,299 - -0.2 4,486,299 - +0.5 4,486,299 - -0.5 4,486,299 - -1.6 4,486,299 - -0.8 4,486,299 - -0.0 4,486,528 + QEN71_RS20160 0.87 +0.5 4,486,528 + QEN71_RS20160 0.87 -0.4 4,486,528 + QEN71_RS20160 0.87 -0.1 4,486,528 + QEN71_RS20160 0.87 -0.6 4,486,528 + QEN71_RS20160 0.87 +0.5 4,486,528 + QEN71_RS20160 0.87 +0.6 4,486,528 + QEN71_RS20160 0.87 -0.9 4,486,528 + QEN71_RS20160 0.87 +0.7 4,486,528 + QEN71_RS20160 0.87 -0.8 4,486,528 + QEN71_RS20160 0.87 -0.7 4,486,528 + QEN71_RS20160 0.87 -0.7 4,486,528 + QEN71_RS20160 0.87 +0.7 4,486,528 + QEN71_RS20160 0.87 -2.1 4,486,528 + QEN71_RS20160 0.87 -0.6 4,486,528 + QEN71_RS20160 0.87 -0.2 4,486,529 - QEN71_RS20160 0.87 +1.1 4,486,529 - QEN71_RS20160 0.87 -0.5 4,486,529 - QEN71_RS20160 0.87 +0.2 4,486,529 - QEN71_RS20160 0.87 +0.7 4,486,529 - QEN71_RS20160 0.87 -1.2 4,486,529 - QEN71_RS20160 0.87 -0.0 4,486,529 - QEN71_RS20160 0.87 +0.2 4,486,529 - QEN71_RS20160 0.87 -0.3 4,486,531 - QEN71_RS20160 0.88 +1.5 4,486,579 + +0.0 4,486,579 + +0.5 4,486,579 + -0.7 4,486,579 + -0.0 4,486,580 - +0.4 4,486,784 + QEN71_RS20165 0.40 -0.9 4,486,784 + QEN71_RS20165 0.40 +0.2 4,486,785 - QEN71_RS20165 0.40 -0.5 4,487,036 - +0.0 4,487,036 - -0.1 4,487,053 + -1.2 4,487,054 - -2.6 4,487,054 - +1.3 4,487,054 - -0.2 4,487,170 + +0.7 4,487,170 + +0.2 4,487,170 + -0.6 4,487,170 + -1.0 4,487,171 - -0.2 4,487,171 - +0.4 4,487,171 - -1.4 4,487,171 - +0.1 4,487,248 + +0.1 4,487,248 + +0.3 4,487,248 + +0.4 4,487,249 - -0.6 4,487,249 - -0.2 4,487,273 - QEN71_RS20170 0.10 +1.4 4,487,290 + QEN71_RS20170 0.12 -0.2 4,487,290 + QEN71_RS20170 0.12 -0.2 4,487,290 + QEN71_RS20170 0.12 -1.2 4,487,291 - QEN71_RS20170 0.12 +0.4 4,487,291 - QEN71_RS20170 0.12 -0.3 4,487,542 + QEN71_RS20170 0.28 -0.9 4,487,542 + QEN71_RS20170 0.28 +0.3 4,487,543 - QEN71_RS20170 0.28 +0.2 4,487,543 - QEN71_RS20170 0.28 -0.2 4,487,543 - QEN71_RS20170 0.28 -0.1 4,487,578 + QEN71_RS20170 0.30 -0.2 4,487,579 - QEN71_RS20170 0.30 -1.9 4,487,579 - QEN71_RS20170 0.30 -1.1 4,487,599 + QEN71_RS20170 0.31 -0.7 4,487,641 + QEN71_RS20170 0.34 +0.5 4,487,641 + QEN71_RS20170 0.34 -2.2 4,487,641 + QEN71_RS20170 0.34 -1.6 4,487,641 + QEN71_RS20170 0.34 -0.8 4,487,641 + QEN71_RS20170 0.34 -0.2 4,487,641 + QEN71_RS20170 0.34 -0.0 4,487,641 + QEN71_RS20170 0.34 +0.7 4,487,641 + QEN71_RS20170 0.34 +0.2 4,487,641 + QEN71_RS20170 0.34 -0.6 4,487,642 - QEN71_RS20170 0.34 +0.7 4,487,642 - QEN71_RS20170 0.34 -0.2 4,487,714 + QEN71_RS20170 0.39 +0.7 4,487,775 - QEN71_RS20170 0.43 -0.0 4,487,775 - QEN71_RS20170 0.43 -0.4 4,487,803 + QEN71_RS20170 0.44 +0.0 4,487,803 + QEN71_RS20170 0.44 +0.2 4,487,803 + QEN71_RS20170 0.44 -0.2 4,487,804 - QEN71_RS20170 0.44 -0.1 4,487,925 + QEN71_RS20170 0.52 -0.3
Or see this region's nucleotide sequence