Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS15800 and QEN71_RS15805 are separated by 264 nucleotides QEN71_RS15805 and QEN71_RS15810 are separated by 87 nucleotides
QEN71_RS15800: QEN71_RS15800 - non-ribosomal peptide synthetase, at 3,516,207 to 3,525,809
_RS15800
QEN71_RS15805: QEN71_RS15805 - cyclic peptide export ABC transporter, at 3,526,074 to 3,527,867
_RS15805
QEN71_RS15810: QEN71_RS15810 - iron-siderophore ABC transporter substrate-binding protein, at 3,527,955 to 3,528,956
_RS15810
Position (kb)
3526
3527
3528 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3525.343 kb on + strand at 3525.344 kb on - strand at 3525.344 kb on - strand at 3525.344 kb on - strand at 3525.838 kb on - strand at 3525.935 kb on + strand at 3526.014 kb on - strand at 3526.014 kb on - strand at 3526.551 kb on + strand, within QEN71_RS15805 at 3526.693 kb on - strand, within QEN71_RS15805 at 3526.824 kb on + strand, within QEN71_RS15805 at 3526.825 kb on - strand, within QEN71_RS15805 at 3526.825 kb on - strand, within QEN71_RS15805 at 3527.035 kb on + strand, within QEN71_RS15805 at 3527.142 kb on + strand, within QEN71_RS15805 at 3527.277 kb on + strand, within QEN71_RS15805 at 3527.513 kb on + strand, within QEN71_RS15805 at 3527.574 kb on + strand, within QEN71_RS15805 at 3527.595 kb on + strand, within QEN71_RS15805 at 3527.595 kb on + strand, within QEN71_RS15805 at 3527.595 kb on + strand, within QEN71_RS15805 at 3527.596 kb on - strand, within QEN71_RS15805 at 3527.596 kb on - strand, within QEN71_RS15805 at 3527.888 kb on + strand at 3527.889 kb on - strand at 3527.976 kb on - strand at 3527.976 kb on - strand at 3528.171 kb on + strand, within QEN71_RS15810 at 3528.564 kb on - strand, within QEN71_RS15810 at 3528.564 kb on - strand, within QEN71_RS15810 at 3528.715 kb on + strand, within QEN71_RS15810
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 3,525,343 + +0.9 3,525,344 - +0.5 3,525,344 - +0.0 3,525,344 - +0.2 3,525,838 - -0.7 3,525,935 + -0.2 3,526,014 - -0.8 3,526,014 - +0.8 3,526,551 + QEN71_RS15805 0.27 -1.8 3,526,693 - QEN71_RS15805 0.35 -2.0 3,526,824 + QEN71_RS15805 0.42 -2.7 3,526,825 - QEN71_RS15805 0.42 -0.2 3,526,825 - QEN71_RS15805 0.42 -3.1 3,527,035 + QEN71_RS15805 0.54 -1.8 3,527,142 + QEN71_RS15805 0.60 -1.7 3,527,277 + QEN71_RS15805 0.67 -1.8 3,527,513 + QEN71_RS15805 0.80 -1.3 3,527,574 + QEN71_RS15805 0.84 -2.6 3,527,595 + QEN71_RS15805 0.85 -2.8 3,527,595 + QEN71_RS15805 0.85 -1.6 3,527,595 + QEN71_RS15805 0.85 -0.3 3,527,596 - QEN71_RS15805 0.85 -1.6 3,527,596 - QEN71_RS15805 0.85 -1.7 3,527,888 + -1.1 3,527,889 - +0.3 3,527,976 - -0.3 3,527,976 - +0.4 3,528,171 + QEN71_RS15810 0.22 -0.9 3,528,564 - QEN71_RS15810 0.61 -0.1 3,528,564 - QEN71_RS15810 0.61 -0.2 3,528,715 + QEN71_RS15810 0.76 +0.5
Or see this region's nucleotide sequence