Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS14700 and QEN71_RS14705 are separated by 9 nucleotides QEN71_RS14705 and QEN71_RS14710 overlap by 4 nucleotides
QEN71_RS14700: QEN71_RS14700 - ectoine hydrolase DoeA, at 3,280,431 to 3,281,639
_RS14700
QEN71_RS14705: QEN71_RS14705 - cyclodeaminase, at 3,281,649 to 3,282,650
_RS14705
QEN71_RS14710: QEN71_RS14710 - hydroxyectoine utilization dehydratase EutB, at 3,282,647 to 3,283,639
_RS14710
Position (kb)
3281
3282
3283 Strain fitness (log2 ratio)
-1
0
1
2 at 3280.724 kb on + strand, within QEN71_RS14700 at 3280.817 kb on - strand, within QEN71_RS14700 at 3280.817 kb on - strand, within QEN71_RS14700 at 3281.011 kb on + strand, within QEN71_RS14700 at 3281.055 kb on - strand, within QEN71_RS14700 at 3281.066 kb on + strand, within QEN71_RS14700 at 3281.110 kb on + strand, within QEN71_RS14700 at 3281.111 kb on - strand, within QEN71_RS14700 at 3281.111 kb on - strand, within QEN71_RS14700 at 3281.209 kb on + strand, within QEN71_RS14700 at 3281.210 kb on - strand, within QEN71_RS14700 at 3281.210 kb on - strand, within QEN71_RS14700 at 3281.230 kb on + strand, within QEN71_RS14700 at 3281.230 kb on + strand, within QEN71_RS14700 at 3281.230 kb on + strand, within QEN71_RS14700 at 3281.231 kb on - strand, within QEN71_RS14700 at 3281.231 kb on - strand, within QEN71_RS14700 at 3281.299 kb on + strand, within QEN71_RS14700 at 3281.299 kb on + strand, within QEN71_RS14700 at 3281.332 kb on + strand, within QEN71_RS14700 at 3281.332 kb on + strand, within QEN71_RS14700 at 3281.332 kb on + strand, within QEN71_RS14700 at 3281.333 kb on - strand, within QEN71_RS14700 at 3281.333 kb on - strand, within QEN71_RS14700 at 3281.333 kb on - strand, within QEN71_RS14700 at 3281.462 kb on - strand, within QEN71_RS14700 at 3281.480 kb on - strand, within QEN71_RS14700 at 3281.630 kb on + strand at 3281.631 kb on - strand at 3281.631 kb on - strand at 3281.631 kb on - strand at 3281.910 kb on + strand, within QEN71_RS14705 at 3282.470 kb on - strand, within QEN71_RS14705 at 3282.470 kb on - strand, within QEN71_RS14705 at 3282.700 kb on + strand at 3282.831 kb on + strand, within QEN71_RS14710 at 3282.832 kb on - strand, within QEN71_RS14710 at 3282.875 kb on + strand, within QEN71_RS14710 at 3282.891 kb on - strand, within QEN71_RS14710 at 3282.913 kb on + strand, within QEN71_RS14710 at 3283.124 kb on - strand, within QEN71_RS14710 at 3283.212 kb on + strand, within QEN71_RS14710 at 3283.212 kb on + strand, within QEN71_RS14710 at 3283.212 kb on + strand, within QEN71_RS14710 at 3283.212 kb on + strand, within QEN71_RS14710 at 3283.212 kb on + strand, within QEN71_RS14710 at 3283.212 kb on + strand, within QEN71_RS14710 at 3283.212 kb on + strand, within QEN71_RS14710 at 3283.213 kb on - strand, within QEN71_RS14710 at 3283.552 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 3,280,724 + QEN71_RS14700 0.24 -1.6 3,280,817 - QEN71_RS14700 0.32 -1.1 3,280,817 - QEN71_RS14700 0.32 -0.4 3,281,011 + QEN71_RS14700 0.48 +1.2 3,281,055 - QEN71_RS14700 0.52 -0.1 3,281,066 + QEN71_RS14700 0.53 -0.8 3,281,110 + QEN71_RS14700 0.56 -0.1 3,281,111 - QEN71_RS14700 0.56 +1.8 3,281,111 - QEN71_RS14700 0.56 +0.7 3,281,209 + QEN71_RS14700 0.64 -0.4 3,281,210 - QEN71_RS14700 0.64 +0.0 3,281,210 - QEN71_RS14700 0.64 +0.1 3,281,230 + QEN71_RS14700 0.66 +0.9 3,281,230 + QEN71_RS14700 0.66 +0.6 3,281,230 + QEN71_RS14700 0.66 +1.3 3,281,231 - QEN71_RS14700 0.66 -0.8 3,281,231 - QEN71_RS14700 0.66 -0.5 3,281,299 + QEN71_RS14700 0.72 +0.7 3,281,299 + QEN71_RS14700 0.72 +0.2 3,281,332 + QEN71_RS14700 0.75 -0.3 3,281,332 + QEN71_RS14700 0.75 +0.3 3,281,332 + QEN71_RS14700 0.75 -1.1 3,281,333 - QEN71_RS14700 0.75 +0.2 3,281,333 - QEN71_RS14700 0.75 -0.8 3,281,333 - QEN71_RS14700 0.75 +1.1 3,281,462 - QEN71_RS14700 0.85 -0.2 3,281,480 - QEN71_RS14700 0.87 -0.2 3,281,630 + +0.2 3,281,631 - -0.8 3,281,631 - +0.4 3,281,631 - -0.3 3,281,910 + QEN71_RS14705 0.26 +0.3 3,282,470 - QEN71_RS14705 0.82 -1.6 3,282,470 - QEN71_RS14705 0.82 +0.1 3,282,700 + +0.0 3,282,831 + QEN71_RS14710 0.19 -0.4 3,282,832 - QEN71_RS14710 0.19 -1.0 3,282,875 + QEN71_RS14710 0.23 +0.4 3,282,891 - QEN71_RS14710 0.25 -0.2 3,282,913 + QEN71_RS14710 0.27 -1.4 3,283,124 - QEN71_RS14710 0.48 +0.6 3,283,212 + QEN71_RS14710 0.57 +0.4 3,283,212 + QEN71_RS14710 0.57 -1.5 3,283,212 + QEN71_RS14710 0.57 -0.3 3,283,212 + QEN71_RS14710 0.57 -0.8 3,283,212 + QEN71_RS14710 0.57 +0.7 3,283,212 + QEN71_RS14710 0.57 -1.0 3,283,212 + QEN71_RS14710 0.57 +0.3 3,283,213 - QEN71_RS14710 0.57 -0.3 3,283,552 + -1.2
Or see this region's nucleotide sequence