Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS10295 and QEN71_RS10300 overlap by 8 nucleotides QEN71_RS10300 and QEN71_RS10305 are separated by 80 nucleotides QEN71_RS10305 and QEN71_RS10310 are separated by 39 nucleotides QEN71_RS10310 and QEN71_RS10315 are separated by 4 nucleotides
QEN71_RS10295: QEN71_RS10295 - hypothetical protein, at 2,289,236 to 2,290,516
_RS10295
QEN71_RS10300: QEN71_RS10300 - hypothetical protein, at 2,290,509 to 2,291,015
_RS10300
QEN71_RS10305: QEN71_RS10305 - hypothetical protein, at 2,291,096 to 2,291,383
_RS10305
QEN71_RS10310: QEN71_RS10310 - hypothetical protein, at 2,291,423 to 2,292,649
_RS10310
QEN71_RS10315: QEN71_RS10315 - hypothetical protein, at 2,292,654 to 2,294,666
_RS10315
Position (kb)
2291
2292
2293 Strain fitness (log2 ratio)
-1
0
1 at 2290.464 kb on + strand at 2290.466 kb on + strand at 2290.467 kb on - strand at 2290.505 kb on - strand at 2290.511 kb on - strand at 2290.563 kb on - strand, within QEN71_RS10300 at 2290.668 kb on + strand, within QEN71_RS10300 at 2290.668 kb on + strand, within QEN71_RS10300 at 2290.669 kb on - strand, within QEN71_RS10300 at 2290.754 kb on + strand, within QEN71_RS10300 at 2290.793 kb on + strand, within QEN71_RS10300 at 2290.793 kb on + strand, within QEN71_RS10300 at 2290.793 kb on + strand, within QEN71_RS10300 at 2290.796 kb on - strand, within QEN71_RS10300 at 2290.981 kb on - strand at 2291.141 kb on - strand, within QEN71_RS10305 at 2291.281 kb on + strand, within QEN71_RS10305 at 2291.598 kb on + strand, within QEN71_RS10310 at 2291.599 kb on - strand, within QEN71_RS10310 at 2291.616 kb on - strand, within QEN71_RS10310 at 2291.821 kb on + strand, within QEN71_RS10310 at 2291.890 kb on + strand, within QEN71_RS10310 at 2292.115 kb on + strand, within QEN71_RS10310 at 2292.241 kb on + strand, within QEN71_RS10310 at 2292.402 kb on + strand, within QEN71_RS10310 at 2292.578 kb on - strand at 2292.622 kb on + strand at 2293.036 kb on + strand, within QEN71_RS10315 at 2293.105 kb on + strand, within QEN71_RS10315 at 2293.181 kb on + strand, within QEN71_RS10315 at 2293.201 kb on + strand, within QEN71_RS10315
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 2,290,464 + -0.5 2,290,466 + -0.5 2,290,467 - -1.4 2,290,505 - +0.5 2,290,511 - +0.1 2,290,563 - QEN71_RS10300 0.11 +0.5 2,290,668 + QEN71_RS10300 0.31 -0.4 2,290,668 + QEN71_RS10300 0.31 -0.9 2,290,669 - QEN71_RS10300 0.32 +0.0 2,290,754 + QEN71_RS10300 0.48 +0.7 2,290,793 + QEN71_RS10300 0.56 -1.7 2,290,793 + QEN71_RS10300 0.56 +0.0 2,290,793 + QEN71_RS10300 0.56 -0.4 2,290,796 - QEN71_RS10300 0.57 -1.1 2,290,981 - -1.5 2,291,141 - QEN71_RS10305 0.16 -0.4 2,291,281 + QEN71_RS10305 0.64 +0.5 2,291,598 + QEN71_RS10310 0.14 -0.2 2,291,599 - QEN71_RS10310 0.14 +0.2 2,291,616 - QEN71_RS10310 0.16 -0.8 2,291,821 + QEN71_RS10310 0.32 -1.5 2,291,890 + QEN71_RS10310 0.38 -0.8 2,292,115 + QEN71_RS10310 0.56 -0.8 2,292,241 + QEN71_RS10310 0.67 -0.5 2,292,402 + QEN71_RS10310 0.80 -0.2 2,292,578 - -1.5 2,292,622 + +0.2 2,293,036 + QEN71_RS10315 0.19 -0.2 2,293,105 + QEN71_RS10315 0.22 -0.7 2,293,181 + QEN71_RS10315 0.26 +1.0 2,293,201 + QEN71_RS10315 0.27 -0.1
Or see this region's nucleotide sequence