Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS09165 and QEN71_RS09170 are separated by 44 nucleotides QEN71_RS09170 and QEN71_RS09175 are separated by 175 nucleotides QEN71_RS09175 and QEN71_RS09180 are separated by 115 nucleotides QEN71_RS09180 and QEN71_RS09185 are separated by 122 nucleotides
QEN71_RS09165: QEN71_RS09165 - hypothetical protein, at 2,050,280 to 2,051,293
_RS09165
QEN71_RS09170: QEN71_RS09170 - hypothetical protein, at 2,051,338 to 2,051,565
_RS09170
QEN71_RS09175: QEN71_RS09175 - hypothetical protein, at 2,051,741 to 2,051,953
_RS09175
QEN71_RS09180: QEN71_RS09180 - RNA-binding protein, at 2,052,069 to 2,052,326
_RS09180
QEN71_RS09185: QEN71_RS09185 - polyphosphate kinase 2, at 2,052,449 to 2,053,246
_RS09185
Position (kb)
2051
2052 Strain fitness (log2 ratio)
-1
0
1
2 at 2050.910 kb on - strand, within QEN71_RS09165 at 2051.090 kb on + strand, within QEN71_RS09165 at 2051.090 kb on + strand, within QEN71_RS09165 at 2051.091 kb on - strand, within QEN71_RS09165 at 2051.091 kb on - strand, within QEN71_RS09165 at 2051.119 kb on + strand, within QEN71_RS09165 at 2051.120 kb on - strand, within QEN71_RS09165 at 2051.262 kb on + strand at 2051.263 kb on - strand at 2051.263 kb on - strand at 2051.263 kb on - strand at 2051.266 kb on + strand at 2051.266 kb on + strand at 2051.292 kb on - strand at 2051.292 kb on - strand at 2051.580 kb on - strand at 2051.617 kb on - strand at 2051.670 kb on + strand at 2051.671 kb on - strand at 2051.761 kb on + strand at 2051.837 kb on + strand, within QEN71_RS09175 at 2051.916 kb on - strand, within QEN71_RS09175 at 2051.981 kb on - strand at 2052.183 kb on - strand, within QEN71_RS09180 at 2052.263 kb on + strand, within QEN71_RS09180 at 2052.263 kb on + strand, within QEN71_RS09180 at 2052.263 kb on + strand, within QEN71_RS09180 at 2052.457 kb on + strand at 2052.704 kb on + strand, within QEN71_RS09185 at 2052.704 kb on + strand, within QEN71_RS09185 at 2052.704 kb on + strand, within QEN71_RS09185 at 2052.704 kb on + strand, within QEN71_RS09185 at 2052.704 kb on + strand, within QEN71_RS09185 at 2052.705 kb on - strand, within QEN71_RS09185 at 2052.705 kb on - strand, within QEN71_RS09185 at 2052.717 kb on - strand, within QEN71_RS09185
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 2,050,910 - QEN71_RS09165 0.62 +0.5 2,051,090 + QEN71_RS09165 0.80 +0.7 2,051,090 + QEN71_RS09165 0.80 -0.5 2,051,091 - QEN71_RS09165 0.80 -1.2 2,051,091 - QEN71_RS09165 0.80 +0.5 2,051,119 + QEN71_RS09165 0.83 -0.7 2,051,120 - QEN71_RS09165 0.83 -1.0 2,051,262 + +0.1 2,051,263 - +0.4 2,051,263 - -0.0 2,051,263 - +0.4 2,051,266 + +0.2 2,051,266 + -0.4 2,051,292 - -0.5 2,051,292 - -1.3 2,051,580 - +0.7 2,051,617 - -0.0 2,051,670 + -0.3 2,051,671 - +0.4 2,051,761 + +2.2 2,051,837 + QEN71_RS09175 0.45 -1.4 2,051,916 - QEN71_RS09175 0.82 +0.4 2,051,981 - -0.9 2,052,183 - QEN71_RS09180 0.44 -0.6 2,052,263 + QEN71_RS09180 0.75 -0.2 2,052,263 + QEN71_RS09180 0.75 +0.6 2,052,263 + QEN71_RS09180 0.75 -0.1 2,052,457 + -0.2 2,052,704 + QEN71_RS09185 0.32 -1.3 2,052,704 + QEN71_RS09185 0.32 +1.1 2,052,704 + QEN71_RS09185 0.32 +0.3 2,052,704 + QEN71_RS09185 0.32 +0.3 2,052,704 + QEN71_RS09185 0.32 -0.5 2,052,705 - QEN71_RS09185 0.32 -0.5 2,052,705 - QEN71_RS09185 0.32 -1.2 2,052,717 - QEN71_RS09185 0.34 -0.1
Or see this region's nucleotide sequence