Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS06015

Experiment: Filtered_supernatant_MT81_in_LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Filtered_supernatant_MT81_in_LB
1,332,528	+		QEN71_RS06010	0.34	+0.6
1,332,528	+		QEN71_RS06010	0.34	-1.1
1,332,528	+		QEN71_RS06010	0.34	-1.2
1,332,528	+		QEN71_RS06010	0.34	-0.4
1,332,528	+		QEN71_RS06010	0.34	-1.1
1,332,528	+		QEN71_RS06010	0.34	-1.6
1,332,529	-		QEN71_RS06010	0.34	-0.7
1,332,605	+		QEN71_RS06010	0.40	+1.0
1,332,629	+		QEN71_RS06010	0.41	+1.1
1,332,629	+		QEN71_RS06010	0.41	-0.9
1,332,629	+		QEN71_RS06010	0.41	-1.2
1,332,629	+		QEN71_RS06010	0.41	-1.3
1,332,713	-		QEN71_RS06010	0.47	-0.2
1,332,791	+		QEN71_RS06010	0.53	-2.3
1,332,791	+		QEN71_RS06010	0.53	-0.9
1,332,791	+		QEN71_RS06010	0.53	-0.9
1,332,923	+		QEN71_RS06010	0.62	-1.6
1,332,923	+		QEN71_RS06010	0.62	+1.2
1,332,923	+		QEN71_RS06010	0.62	-3.2
1,332,924	-		QEN71_RS06010	0.62	-0.4
1,332,924	-		QEN71_RS06010	0.62	-1.3
1,332,989	+		QEN71_RS06010	0.67	-1.9
1,332,989	+		QEN71_RS06010	0.67	-1.2
1,332,989	+		QEN71_RS06010	0.67	-0.9
1,332,989	+		QEN71_RS06010	0.67	-1.8
1,332,989	+		QEN71_RS06010	0.67	-1.5
1,332,989	+		QEN71_RS06010	0.67	-1.6
1,332,989	+		QEN71_RS06010	0.67	-0.6
1,332,989	+		QEN71_RS06010	0.67	+0.4
1,332,989	+		QEN71_RS06010	0.67	+0.0
1,332,990	-		QEN71_RS06010	0.67	-2.5
1,332,990	-		QEN71_RS06010	0.67	-0.9
1,332,990	-		QEN71_RS06010	0.67	-0.7
1,332,990	-		QEN71_RS06010	0.67	-0.6
1,332,990	-		QEN71_RS06010	0.67	+2.2
1,332,990	-		QEN71_RS06010	0.67	-1.0
1,332,990	-		QEN71_RS06010	0.67	-2.2
1,332,990	-		QEN71_RS06010	0.67	-2.3
1,332,990	-		QEN71_RS06010	0.67	-1.7
1,332,990	-		QEN71_RS06010	0.67	-1.0
1,333,046	+		QEN71_RS06010	0.71	-0.2
1,333,046	+		QEN71_RS06010	0.71	-0.8
1,333,046	+		QEN71_RS06010	0.71	-0.2
1,333,046	+		QEN71_RS06010	0.71	+0.1
1,333,047	-		QEN71_RS06010	0.71	-1.1
1,333,047	-		QEN71_RS06010	0.71	+0.4
1,333,047	-		QEN71_RS06010	0.71	-0.7
1,333,047	-		QEN71_RS06010	0.71	-1.3
1,333,055	+		QEN71_RS06010	0.72	-1.0
1,333,055	+		QEN71_RS06010	0.72	-1.0
1,333,055	+		QEN71_RS06010	0.72	-1.4
1,333,091	+		QEN71_RS06010	0.74	-0.9
1,333,091	+		QEN71_RS06010	0.74	-0.6
1,333,092	-		QEN71_RS06010	0.74	-1.6
1,333,092	-		QEN71_RS06010	0.74	-0.4
1,333,092	-		QEN71_RS06010	0.74	-2.1
1,333,092	-		QEN71_RS06010	0.74	-2.6
1,333,115	+		QEN71_RS06010	0.76	-0.8
1,333,115	+		QEN71_RS06010	0.76	-2.0
1,333,169	+		QEN71_RS06010	0.80	-1.7
1,333,170	-		QEN71_RS06010	0.80	-2.2
1,333,170	-		QEN71_RS06010	0.80	-1.0
1,333,451	+				-0.8
1,333,451	+				+0.1
1,333,452	-				+1.5
1,333,490	+				-2.2
1,333,490	+				-1.0
1,333,490	+				-0.4
1,333,490	+				+0.0
1,333,490	+				-0.2
1,333,490	+				-1.0
1,333,490	+				-0.3
1,333,491	-				-1.6
1,333,491	-				-0.6
1,333,491	-				-1.0
1,333,491	-				-2.6
1,333,494	+				-1.3
1,333,494	+				-0.9
1,333,494	+				-0.9
1,333,494	+				-1.5
1,333,494	+				-1.5
1,333,494	+				-0.4
1,333,494	+				-1.5
1,333,495	-				-2.9
1,333,495	-				-0.4
1,333,551	+				-0.6
1,333,551	+				-0.9
1,333,551	+				-1.1
1,333,551	+				-0.6
1,333,551	+				-1.1
1,333,552	-				+0.0
1,333,552	-				-0.6
1,333,724	+		QEN71_RS06015	0.28	-1.1
1,333,724	+		QEN71_RS06015	0.28	-1.2
1,333,724	+		QEN71_RS06015	0.28	-0.6
1,333,724	+		QEN71_RS06015	0.28	-0.3
1,333,855	+		QEN71_RS06015	0.42	-0.8
1,333,855	+		QEN71_RS06015	0.42	-1.7
1,333,855	+		QEN71_RS06015	0.42	-0.6
1,333,855	+		QEN71_RS06015	0.42	-1.9
1,333,855	+		QEN71_RS06015	0.42	-1.2
1,333,856	-		QEN71_RS06015	0.42	-2.6
1,333,856	-		QEN71_RS06015	0.42	-2.0
1,333,856	-		QEN71_RS06015	0.42	-1.6
1,333,856	-		QEN71_RS06015	0.42	-0.9
1,334,128	+		QEN71_RS06015	0.72	-1.1
1,334,128	+		QEN71_RS06015	0.72	-1.4
1,334,128	+		QEN71_RS06015	0.72	-0.8
1,334,129	-		QEN71_RS06015	0.72	-0.6
1,334,194	+		QEN71_RS06015	0.79	-3.6
1,334,215	+		QEN71_RS06015	0.81	-0.3
1,334,215	+		QEN71_RS06015	0.81	-1.7
1,334,215	+		QEN71_RS06015	0.81	-1.0
1,334,216	-		QEN71_RS06015	0.82	-1.9
1,334,224	+		QEN71_RS06015	0.82	-0.6
1,334,224	+		QEN71_RS06015	0.82	-0.9
1,334,225	-		QEN71_RS06015	0.83	-1.7
1,334,225	-		QEN71_RS06015	0.83	-0.9
1,334,242	+		QEN71_RS06015	0.84	-1.9
1,334,242	+		QEN71_RS06015	0.84	-0.7
1,334,242	+		QEN71_RS06015	0.84	-0.7
1,334,242	+		QEN71_RS06015	0.84	-0.7
1,334,243	-		QEN71_RS06015	0.84	-0.1
1,334,405	+				-0.9
1,334,406	-				-2.3
1,334,437	-				-0.5
1,334,437	-				-0.6
1,334,437	-				-0.2
1,334,437	-				-0.3
1,334,437	-				+0.3
1,334,449	-		QEN71_RS06020	0.10	-0.4
1,334,499	+		QEN71_RS06020	0.36	-0.2
1,334,500	-		QEN71_RS06020	0.37	+1.8
1,334,500	-		QEN71_RS06020	0.37	-1.2
1,334,530	+		QEN71_RS06020	0.53	-0.3
1,334,531	-		QEN71_RS06020	0.53	-0.1
1,334,558	-		QEN71_RS06020	0.67	-2.2
1,334,618	+				-1.1
1,334,618	+				-1.3
1,334,619	-				-0.4
1,334,619	-				-0.4
1,334,723	-				-0.7
1,334,870	+				-0.8
1,334,871	-				+0.3
1,334,871	-				+1.6
1,334,878	+				-0.7
1,334,878	+				+0.4
1,334,878	+				-0.2
1,334,878	+				+1.3
1,334,878	+				-0.2
1,334,879	-				-0.1
1,334,879	-				-1.1
1,334,879	-				+1.0
1,334,879	-				-0.3
1,334,879	-				+0.8
1,334,879	-				-0.6
1,334,896	+				-0.2
1,334,896	+				-0.7
1,334,896	+				-0.2
1,334,896	+				-1.5
1,334,896	+				-0.3
1,334,896	+				-2.0
1,334,896	+				+0.9
1,334,896	+				+0.8
1,334,897	-				-0.6
1,334,897	-				+0.4
1,334,897	-				-0.5
1,334,897	-				+1.3
1,334,897	-				-0.2
1,334,910	-				+0.6
1,334,910	-				-0.2
1,334,986	-				+0.6
1,334,986	-				+1.3
1,334,991	+				-0.8
1,334,991	+				-0.3
1,334,992	-				-0.2
1,334,992	-				-0.6
1,334,992	-				-0.4
1,334,992	-				+0.7
1,335,022	-		QEN71_RS06025	0.12	-1.1
1,335,068	+		QEN71_RS06025	0.16	-1.0
1,335,069	-		QEN71_RS06025	0.16	-0.7
1,335,069	-		QEN71_RS06025	0.16	-0.5
1,335,069	-		QEN71_RS06025	0.16	-0.2
1,335,069	-		QEN71_RS06025	0.16	+0.6
1,335,069	-		QEN71_RS06025	0.16	-0.0
1,335,189	+		QEN71_RS06025	0.27	-0.8
1,335,189	+		QEN71_RS06025	0.27	-2.2
1,335,189	+		QEN71_RS06025	0.27	-0.8
1,335,189	+		QEN71_RS06025	0.27	+0.2
1,335,189	+		QEN71_RS06025	0.27	-1.9
1,335,190	-		QEN71_RS06025	0.27	-1.3
1,335,190	-		QEN71_RS06025	0.27	-1.3
1,335,190	-		QEN71_RS06025	0.27	-0.7
1,335,190	-		QEN71_RS06025	0.27	-0.6
1,335,190	-		QEN71_RS06025	0.27	+0.3
1,335,190	-		QEN71_RS06025	0.27	-0.8
1,335,209	+		QEN71_RS06025	0.28	-0.5
1,335,209	+		QEN71_RS06025	0.28	-1.0
1,335,209	+		QEN71_RS06025	0.28	-0.1
1,335,209	+		QEN71_RS06025	0.28	-0.3
1,335,210	-		QEN71_RS06025	0.28	+0.3
1,335,210	-		QEN71_RS06025	0.28	+0.3
1,335,210	-		QEN71_RS06025	0.28	-1.1
1,335,210	-		QEN71_RS06025	0.28	+0.6
1,335,268	-		QEN71_RS06025	0.33	+0.6