Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03440 and QEN71_RS03445 are separated by 62 nucleotides QEN71_RS03445 and QEN71_RS03450 are separated by 239 nucleotides QEN71_RS03450 and QEN71_RS03455 are separated by 63 nucleotides
QEN71_RS03440: QEN71_RS03440 - response regulator, at 766,458 to 767,129
_RS03440
QEN71_RS03445: QEN71_RS03445 - response regulator, at 767,192 to 767,578
_RS03445
QEN71_RS03450: QEN71_RS03450 - efflux RND transporter periplasmic adaptor subunit, at 767,818 to 769,071
_RS03450
QEN71_RS03455: QEN71_RS03455 - multidrug efflux RND transporter permease subunit, at 769,135 to 772,395
_RS03455
Position (kb) 767
768
769
770 Strain fitness (log2 ratio) -2
-1
0
1
2 at 767.072 kb on + strand at 767.072 kb on + strand at 767.086 kb on + strand at 767.087 kb on - strand at 767.104 kb on + strand at 767.104 kb on + strand at 767.104 kb on + strand at 767.105 kb on - strand at 767.105 kb on - strand at 767.127 kb on + strand at 767.127 kb on + strand at 767.127 kb on + strand at 767.128 kb on - strand at 767.128 kb on - strand at 767.128 kb on - strand at 767.128 kb on - strand at 767.132 kb on + strand at 767.132 kb on + strand at 767.132 kb on + strand at 767.132 kb on + strand at 767.132 kb on + strand at 767.132 kb on + strand at 767.132 kb on + strand at 767.133 kb on - strand at 767.133 kb on - strand at 767.133 kb on - strand at 767.133 kb on - strand at 767.179 kb on + strand at 767.179 kb on + strand at 767.179 kb on + strand at 767.180 kb on - strand at 767.184 kb on + strand at 767.220 kb on + strand at 767.290 kb on + strand, within QEN71_RS03445 at 767.294 kb on + strand, within QEN71_RS03445 at 767.294 kb on + strand, within QEN71_RS03445 at 767.295 kb on - strand, within QEN71_RS03445 at 767.295 kb on - strand, within QEN71_RS03445 at 767.295 kb on - strand, within QEN71_RS03445 at 767.295 kb on - strand, within QEN71_RS03445 at 767.295 kb on - strand, within QEN71_RS03445 at 767.343 kb on - strand, within QEN71_RS03445 at 767.501 kb on + strand, within QEN71_RS03445 at 767.619 kb on + strand at 767.619 kb on + strand at 767.619 kb on + strand at 767.619 kb on + strand at 767.619 kb on + strand at 767.620 kb on - strand at 767.620 kb on - strand at 767.620 kb on - strand at 767.620 kb on - strand at 767.620 kb on - strand at 767.620 kb on - strand at 767.620 kb on - strand at 767.621 kb on + strand at 767.622 kb on - strand at 767.622 kb on - strand at 767.622 kb on - strand at 767.659 kb on + strand at 768.086 kb on - strand, within QEN71_RS03450 at 768.222 kb on - strand, within QEN71_RS03450 at 769.369 kb on + strand at 769.369 kb on + strand at 769.369 kb on + strand at 769.369 kb on + strand at 769.369 kb on + strand at 769.369 kb on + strand at 769.369 kb on + strand at 769.369 kb on + strand at 769.370 kb on - strand at 769.370 kb on - strand at 769.370 kb on - strand at 769.370 kb on - strand at 769.370 kb on - strand at 769.370 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 767,072 + +0.2 767,072 + +0.3 767,086 + -0.0 767,087 - +0.2 767,104 + +0.8 767,104 + -0.1 767,104 + +0.3 767,105 - -1.1 767,105 - -0.2 767,127 + -1.5 767,127 + +0.0 767,127 + +1.2 767,128 - +0.4 767,128 - -1.6 767,128 - -0.4 767,128 - -0.2 767,132 + -1.0 767,132 + +1.7 767,132 + +0.1 767,132 + +0.0 767,132 + +0.3 767,132 + -0.3 767,132 + -0.5 767,133 - +0.0 767,133 - +0.3 767,133 - +0.5 767,133 - -0.3 767,179 + -0.0 767,179 + -1.9 767,179 + +0.3 767,180 - +0.1 767,184 + +1.3 767,220 + -0.0 767,290 + QEN71_RS03445 0.25 -0.3 767,294 + QEN71_RS03445 0.26 +0.1 767,294 + QEN71_RS03445 0.26 +0.6 767,295 - QEN71_RS03445 0.27 +0.2 767,295 - QEN71_RS03445 0.27 +1.0 767,295 - QEN71_RS03445 0.27 +0.4 767,295 - QEN71_RS03445 0.27 -0.8 767,295 - QEN71_RS03445 0.27 +0.4 767,343 - QEN71_RS03445 0.39 -1.6 767,501 + QEN71_RS03445 0.80 +0.7 767,619 + -0.1 767,619 + +0.4 767,619 + -1.3 767,619 + +1.3 767,619 + -1.5 767,620 - -0.5 767,620 - -0.6 767,620 - -1.1 767,620 - +2.5 767,620 - +0.2 767,620 - +0.0 767,620 - -1.0 767,621 + -0.1 767,622 - -0.5 767,622 - +0.6 767,622 - -0.2 767,659 + +1.3 768,086 - QEN71_RS03450 0.21 -1.8 768,222 - QEN71_RS03450 0.32 -0.0 769,369 + -0.6 769,369 + -0.2 769,369 + +0.1 769,369 + +0.2 769,369 + +0.6 769,369 + +0.7 769,369 + -0.1 769,369 + -0.9 769,370 - -0.0 769,370 - +0.6 769,370 - -1.4 769,370 - +0.5 769,370 - +0.2 769,370 - +1.0
Or see this region's nucleotide sequence