Experiment: Filtered_supernatant_MT81_in_LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03260 and QEN71_RS03265 are separated by 593 nucleotides QEN71_RS03265 and QEN71_RS03270 are separated by 64 nucleotides
QEN71_RS03260: QEN71_RS03260 - UbiD family decarboxylase, at 722,372 to 723,949
_RS03260
QEN71_RS03265: QEN71_RS03265 - transglycosylase SLT domain-containing protein, at 724,543 to 725,742
_RS03265
QEN71_RS03270: QEN71_RS03270 - IS4 family transposase, at 725,807 to 727,153
_RS03270
Position (kb) 724
725
726 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 723.893 kb on + strand at 723.893 kb on + strand at 723.894 kb on - strand at 723.942 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.969 kb on + strand at 723.970 kb on - strand at 723.970 kb on - strand at 723.970 kb on - strand at 723.978 kb on + strand at 723.978 kb on + strand at 723.978 kb on + strand at 723.979 kb on - strand at 723.979 kb on - strand at 724.102 kb on + strand at 724.169 kb on + strand at 724.183 kb on + strand at 724.183 kb on + strand at 724.183 kb on + strand at 724.184 kb on - strand at 724.185 kb on + strand at 724.196 kb on + strand at 724.196 kb on + strand at 724.196 kb on + strand at 724.196 kb on + strand at 724.196 kb on + strand at 724.196 kb on + strand at 724.197 kb on - strand at 724.197 kb on - strand at 724.197 kb on - strand at 724.223 kb on + strand at 724.224 kb on - strand at 724.230 kb on - strand at 724.277 kb on + strand at 724.293 kb on + strand at 724.293 kb on + strand at 724.294 kb on - strand at 724.294 kb on - strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.305 kb on + strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.306 kb on - strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.309 kb on + strand at 724.310 kb on - strand at 724.310 kb on - strand at 724.310 kb on - strand at 724.310 kb on - strand at 724.415 kb on + strand at 724.451 kb on - strand at 724.506 kb on + strand at 724.507 kb on - strand at 724.674 kb on + strand, within QEN71_RS03265 at 724.674 kb on + strand, within QEN71_RS03265 at 724.674 kb on + strand, within QEN71_RS03265 at 724.675 kb on - strand, within QEN71_RS03265 at 724.675 kb on - strand, within QEN71_RS03265 at 724.675 kb on - strand, within QEN71_RS03265 at 724.675 kb on - strand, within QEN71_RS03265 at 724.833 kb on + strand, within QEN71_RS03265 at 724.833 kb on + strand, within QEN71_RS03265 at 724.833 kb on + strand, within QEN71_RS03265 at 724.833 kb on + strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.834 kb on - strand, within QEN71_RS03265 at 724.906 kb on + strand, within QEN71_RS03265 at 725.121 kb on + strand, within QEN71_RS03265 at 725.121 kb on + strand, within QEN71_RS03265 at 725.257 kb on + strand, within QEN71_RS03265 at 725.329 kb on + strand, within QEN71_RS03265 at 725.329 kb on + strand, within QEN71_RS03265 at 725.329 kb on + strand, within QEN71_RS03265 at 725.329 kb on + strand, within QEN71_RS03265 at 725.330 kb on - strand, within QEN71_RS03265 at 725.330 kb on - strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.443 kb on + strand, within QEN71_RS03265 at 725.444 kb on - strand, within QEN71_RS03265 at 725.444 kb on - strand, within QEN71_RS03265 at 725.444 kb on - strand, within QEN71_RS03265 at 725.444 kb on - strand, within QEN71_RS03265 at 725.444 kb on - strand, within QEN71_RS03265 at 725.444 kb on - strand, within QEN71_RS03265 at 725.502 kb on + strand, within QEN71_RS03265 at 725.502 kb on + strand, within QEN71_RS03265 at 725.502 kb on + strand, within QEN71_RS03265 at 725.502 kb on + strand, within QEN71_RS03265 at 725.503 kb on - strand, within QEN71_RS03265 at 725.503 kb on - strand, within QEN71_RS03265 at 725.503 kb on - strand, within QEN71_RS03265 at 725.503 kb on - strand, within QEN71_RS03265 at 725.745 kb on + strand at 725.745 kb on + strand at 725.745 kb on + strand at 725.745 kb on + strand at 725.746 kb on - strand at 725.746 kb on - strand at 725.746 kb on - strand at 725.799 kb on - strand at 725.799 kb on - strand at 725.813 kb on - strand at 725.813 kb on - strand at 725.813 kb on - strand at 725.813 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Filtered_supernatant_MT81_in_LB remove 723,893 + -1.5 723,893 + -0.8 723,894 - -0.6 723,942 + -0.4 723,969 + -0.3 723,969 + -0.1 723,969 + -1.9 723,969 + -1.0 723,969 + -0.8 723,969 + -0.7 723,969 + +1.6 723,969 + -2.6 723,969 + -0.6 723,969 + -0.0 723,969 + -1.4 723,970 - -0.9 723,970 - -0.1 723,970 - +0.7 723,978 + -0.7 723,978 + +0.2 723,978 + -1.0 723,979 - +0.6 723,979 - +0.0 724,102 + -0.6 724,169 + -1.1 724,183 + -1.8 724,183 + -0.9 724,183 + -2.1 724,184 - -1.2 724,185 + -1.1 724,196 + +0.2 724,196 + +0.4 724,196 + -1.9 724,196 + +0.4 724,196 + -0.4 724,196 + -1.2 724,197 - -1.4 724,197 - -1.8 724,197 - +0.2 724,223 + +0.6 724,224 - -1.3 724,230 - +0.5 724,277 + +0.1 724,293 + -0.4 724,293 + -0.7 724,294 - -1.2 724,294 - -2.6 724,305 + -0.1 724,305 + -1.6 724,305 + -0.2 724,305 + +0.4 724,305 + -0.3 724,305 + +0.4 724,305 + -1.0 724,305 + +1.6 724,305 + -0.4 724,305 + -0.3 724,305 + -1.5 724,305 + -0.6 724,305 + -0.6 724,305 + -0.3 724,305 + -0.6 724,305 + -0.4 724,305 + +0.9 724,305 + -0.4 724,305 + -0.1 724,305 + -0.4 724,305 + -0.1 724,305 + +2.0 724,305 + +0.5 724,305 + -0.1 724,305 + -0.4 724,305 + -0.4 724,305 + -0.3 724,305 + +0.6 724,305 + +0.3 724,305 + -0.8 724,305 + +0.4 724,305 + +0.1 724,305 + +1.4 724,305 + -0.1 724,306 - -2.5 724,306 - -1.5 724,306 - -3.0 724,306 - -0.8 724,306 - -1.5 724,306 - -0.4 724,306 - -2.4 724,306 - -3.1 724,306 - -1.2 724,306 - +0.1 724,306 - -0.7 724,306 - -0.9 724,306 - -1.8 724,306 - -1.8 724,306 - -0.1 724,306 - -1.1 724,306 - -2.5 724,306 - -2.2 724,306 - -2.0 724,306 - -3.4 724,309 + +0.2 724,309 + +0.2 724,309 + -0.5 724,309 + +1.0 724,309 + +0.7 724,309 + -0.3 724,309 + +0.3 724,309 + +0.1 724,309 + -0.4 724,309 + +0.4 724,309 + +0.6 724,309 + +0.6 724,310 - -2.1 724,310 - -0.4 724,310 - -2.1 724,310 - -1.2 724,415 + -1.6 724,451 - -1.7 724,506 + -0.9 724,507 - -0.8 724,674 + QEN71_RS03265 0.11 -2.4 724,674 + QEN71_RS03265 0.11 -1.4 724,674 + QEN71_RS03265 0.11 -1.1 724,675 - QEN71_RS03265 0.11 -1.1 724,675 - QEN71_RS03265 0.11 -0.8 724,675 - QEN71_RS03265 0.11 -1.9 724,675 - QEN71_RS03265 0.11 -0.8 724,833 + QEN71_RS03265 0.24 -0.6 724,833 + QEN71_RS03265 0.24 -1.9 724,833 + QEN71_RS03265 0.24 -0.9 724,833 + QEN71_RS03265 0.24 -3.8 724,834 - QEN71_RS03265 0.24 -0.5 724,834 - QEN71_RS03265 0.24 -2.4 724,834 - QEN71_RS03265 0.24 -1.4 724,834 - QEN71_RS03265 0.24 -1.7 724,834 - QEN71_RS03265 0.24 -1.5 724,834 - QEN71_RS03265 0.24 -1.2 724,834 - QEN71_RS03265 0.24 -0.3 724,834 - QEN71_RS03265 0.24 -1.8 724,834 - QEN71_RS03265 0.24 -0.0 724,906 + QEN71_RS03265 0.30 -2.5 725,121 + QEN71_RS03265 0.48 -1.8 725,121 + QEN71_RS03265 0.48 -0.9 725,257 + QEN71_RS03265 0.59 -0.7 725,329 + QEN71_RS03265 0.66 -3.3 725,329 + QEN71_RS03265 0.66 -2.4 725,329 + QEN71_RS03265 0.66 -0.8 725,329 + QEN71_RS03265 0.66 -0.4 725,330 - QEN71_RS03265 0.66 -1.3 725,330 - QEN71_RS03265 0.66 -2.1 725,443 + QEN71_RS03265 0.75 -1.4 725,443 + QEN71_RS03265 0.75 +0.3 725,443 + QEN71_RS03265 0.75 -2.3 725,443 + QEN71_RS03265 0.75 +0.0 725,443 + QEN71_RS03265 0.75 -2.0 725,443 + QEN71_RS03265 0.75 -1.6 725,443 + QEN71_RS03265 0.75 -2.9 725,443 + QEN71_RS03265 0.75 -0.0 725,444 - QEN71_RS03265 0.75 -2.4 725,444 - QEN71_RS03265 0.75 -1.8 725,444 - QEN71_RS03265 0.75 -1.5 725,444 - QEN71_RS03265 0.75 -3.0 725,444 - QEN71_RS03265 0.75 -2.4 725,444 - QEN71_RS03265 0.75 -2.7 725,502 + QEN71_RS03265 0.80 -2.9 725,502 + QEN71_RS03265 0.80 +0.3 725,502 + QEN71_RS03265 0.80 -2.4 725,502 + QEN71_RS03265 0.80 -1.5 725,503 - QEN71_RS03265 0.80 -3.0 725,503 - QEN71_RS03265 0.80 -1.7 725,503 - QEN71_RS03265 0.80 -1.8 725,503 - QEN71_RS03265 0.80 -0.4 725,745 + -0.4 725,745 + -1.5 725,745 + +0.0 725,745 + -0.5 725,746 - -1.3 725,746 - +0.2 725,746 - +0.0 725,799 - -0.0 725,799 - +1.5 725,813 - -0.7 725,813 - +1.2 725,813 - -1.5 725,813 - -1.5
Or see this region's nucleotide sequence