Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04166

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
29,271	+				-2.2
29,327	+				+1.1
29,582	+				-0.6
29,590	-				-0.5
29,595	+				-1.4
29,603	-				+0.9
29,603	-				+1.9
29,782	+				-0.6
29,790	+				+0.8
29,790	-				+0.2
29,799	-				-0.6
29,876	-				+1.9
29,899	-		MIT1002_04164	0.16	+0.9
29,929	+		MIT1002_04164	0.41	+0.7
29,954	+		MIT1002_04164	0.61	-2.5
29,962	-		MIT1002_04164	0.67	-0.1
30,074	-		MIT1002_04165	0.58	+1.3
30,074	-		MIT1002_04165	0.58	-0.3
30,097	-		MIT1002_04165	0.75	-0.1
30,097	-		MIT1002_04165	0.75	-0.4
30,117	+				+0.3
30,132	-				+0.2
30,144	+				-1.2
30,251	+				+0.5
30,256	+				-0.2
30,287	+				+0.2
30,293	+				+0.3
30,293	+				+0.5
30,368	+		MIT1002_04166	0.15	-1.3
30,495	+		MIT1002_04166	0.25	-0.7
30,501	+		MIT1002_04166	0.26	-0.1
30,569	-		MIT1002_04166	0.31	+0.5
30,571	+		MIT1002_04166	0.31	-0.3
30,671	+		MIT1002_04166	0.39	+1.0
30,679	-		MIT1002_04166	0.40	-0.5
30,696	-		MIT1002_04166	0.41	+0.2
30,722	-		MIT1002_04166	0.43	-0.3
30,748	-		MIT1002_04166	0.45	+1.0
30,857	+		MIT1002_04166	0.54	+0.6
30,925	+		MIT1002_04166	0.59	+0.5
30,979	-		MIT1002_04166	0.63	+1.0
30,993	+		MIT1002_04166	0.64	+0.6
31,019	+		MIT1002_04166	0.66	+0.8
31,031	+		MIT1002_04166	0.67	-0.2
31,039	-		MIT1002_04166	0.68	+1.1
31,046	+		MIT1002_04166	0.68	+0.1
31,051	-		MIT1002_04166	0.69	-1.2
31,054	-		MIT1002_04166	0.69	+0.2
31,173	+		MIT1002_04166	0.78	+1.2
31,185	+		MIT1002_04166	0.79	+1.6
31,193	-		MIT1002_04166	0.80	+0.8
31,273	-		MIT1002_04166	0.86	+0.3
31,280	-		MIT1002_04166	0.87	+2.8
31,311	+		MIT1002_04166	0.89	+0.4
31,315	+		MIT1002_04166	0.89	-1.2
31,315	+		MIT1002_04166	0.89	+0.1
31,321	-		MIT1002_04166	0.90	+0.5
31,373	+				-1.1
31,381	-				-0.4
31,441	+				+0.3
31,442	+				-2.3
31,448	+				-4.0
31,455	+				-0.3
31,465	+				-1.8
31,974	-				-1.7
32,072	+				+0.4
32,080	-				-0.9
32,091	-				+0.8
32,110	-				+0.5
32,139	-		MIT1002_04168	0.19	+0.4
32,191	-		MIT1002_04168	0.46	+0.2
32,199	+		MIT1002_04168	0.50	-2.0
32,209	+		MIT1002_04168	0.55	+0.1
32,245	+		MIT1002_04168	0.74	+0.1
32,245	+		MIT1002_04168	0.74	+0.9
32,253	-		MIT1002_04168	0.78	-0.4
32,253	-		MIT1002_04168	0.78	-1.2
32,253	-		MIT1002_04168	0.78	-0.6
32,263	-		MIT1002_04168	0.83	+1.0