Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04123

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
4,622,273	-				-0.3
4,622,304	-				+0.2
4,622,304	-				-1.3
4,622,309	+				-1.8
4,622,317	-				-0.4
4,622,317	-				-2.0
4,622,317	-				-2.5
4,622,317	-				-1.2
4,622,362	-				-3.0
4,622,362	-				-1.6
4,622,383	-				-1.8
4,622,401	+				-1.4
4,622,416	+				-0.3
4,622,479	+		MIT1002_04122	0.11	+0.6
4,622,718	+		MIT1002_04122	0.41	-1.6
4,622,718	+		MIT1002_04122	0.41	-3.7
4,622,753	-		MIT1002_04122	0.45	-0.2
4,622,786	-		MIT1002_04122	0.49	-0.8
4,623,089	+		MIT1002_04122	0.87	-0.4
4,623,096	-		MIT1002_04122	0.88	-0.1
4,623,096	-		MIT1002_04122	0.88	-0.8
4,623,207	-				-1.0
4,623,341	-		MIT1002_04123	0.18	-0.8
4,623,390	+		MIT1002_04123	0.26	-0.3
4,623,423	+		MIT1002_04123	0.31	-1.3
4,623,428	+		MIT1002_04123	0.32	-1.8
4,623,428	+		MIT1002_04123	0.32	-0.6
4,623,440	+		MIT1002_04123	0.34	+0.9
4,623,440	+		MIT1002_04123	0.34	+2.1
4,623,441	-		MIT1002_04123	0.34	-0.9
4,623,474	-		MIT1002_04123	0.39	+0.1
4,623,484	-		MIT1002_04123	0.41	-1.3
4,623,494	-		MIT1002_04123	0.42	-1.0
4,623,502	+		MIT1002_04123	0.44	-0.2
4,623,510	-		MIT1002_04123	0.45	-1.1
4,623,510	-		MIT1002_04123	0.45	+0.4
4,623,511	+		MIT1002_04123	0.45	-1.3
4,623,543	-		MIT1002_04123	0.50	+2.4
4,623,611	+		MIT1002_04123	0.61	-1.5
4,623,611	+		MIT1002_04123	0.61	+1.2
4,623,664	-		MIT1002_04123	0.69	-1.1
4,623,755	-		MIT1002_04123	0.83	+1.9
4,623,791	+		MIT1002_04123	0.89	-1.3
4,623,816	+				-1.2
4,623,844	-				-0.8
4,623,898	+				-2.1
4,623,901	-				-1.8
4,623,901	-				-1.2
4,623,901	-				-0.4
4,623,903	+				-1.3
4,623,903	+				-0.2
4,623,910	+				-2.3
4,623,911	-				+0.3
4,623,911	-				-0.7
4,623,918	-				-0.2
4,623,989	-				+2.3
4,623,991	-				+0.4
4,624,052	-				-1.7
4,624,152	+				-1.1
4,624,165	-				+0.0
4,624,196	-				-0.1
4,624,219	+				-0.2
4,624,354	+				+0.2
4,624,377	+		MIT1002_04124	0.10	+0.2