Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03831

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
4,279,462	-				-0.7
4,279,479	+				-0.6
4,279,520	-				-1.7
4,279,594	+				-1.4
4,279,607	-				+0.3
4,279,653	-		MIT1002_03830	0.12	-1.7
4,279,729	+		MIT1002_03830	0.22	-1.2
4,279,748	+		MIT1002_03830	0.24	-1.0
4,279,758	+		MIT1002_03830	0.26	-0.6
4,279,763	+		MIT1002_03830	0.26	+0.3
4,279,893	+		MIT1002_03830	0.44	-1.2
4,279,901	-		MIT1002_03830	0.45	-1.1
4,279,908	+		MIT1002_03830	0.46	-1.2
4,279,911	-		MIT1002_03830	0.46	-2.7
4,279,966	+		MIT1002_03830	0.53	-0.7
4,279,966	+		MIT1002_03830	0.53	-0.4
4,279,986	+		MIT1002_03830	0.56	-1.6
4,279,989	-		MIT1002_03830	0.57	-2.1
4,279,991	+		MIT1002_03830	0.57	-0.4
4,279,999	-		MIT1002_03830	0.58	+1.4
4,280,031	+		MIT1002_03830	0.62	-1.1
4,280,039	-		MIT1002_03830	0.63	-0.4
4,280,177	-		MIT1002_03830	0.82	-0.8
4,280,183	+		MIT1002_03830	0.82	-1.3
4,280,225	-		MIT1002_03830	0.88	+1.0
4,280,225	-		MIT1002_03830	0.88	-0.1
4,280,235	-		MIT1002_03830	0.89	+0.8
4,280,266	+				-0.5
4,280,280	-				-0.3
4,280,312	+				+0.1
4,280,325	-				-3.2
4,280,386	+				-2.0
4,280,447	+				+0.1
4,280,449	+				-1.0
4,280,465	+				+2.3
4,280,475	-				-1.2
4,280,490	+		MIT1002_03831	0.10	+0.0
4,280,492	-		MIT1002_03831	0.10	+1.0
4,280,504	-		MIT1002_03831	0.12	+0.1
4,280,522	-		MIT1002_03831	0.14	-0.7
4,280,546	+		MIT1002_03831	0.18	-0.6
4,280,553	+		MIT1002_03831	0.18	+0.3
4,280,553	+		MIT1002_03831	0.18	+0.9
4,280,561	-		MIT1002_03831	0.20	+1.1
4,280,561	-		MIT1002_03831	0.20	-0.8
4,280,592	+		MIT1002_03831	0.24	-1.5
4,280,628	-		MIT1002_03831	0.28	+0.9
4,280,647	+		MIT1002_03831	0.31	-1.5
4,280,647	+		MIT1002_03831	0.31	+0.2
4,280,652	+		MIT1002_03831	0.32	+0.6
4,280,654	+		MIT1002_03831	0.32	+0.3
4,280,655	-		MIT1002_03831	0.32	+0.2
4,280,660	-		MIT1002_03831	0.33	+1.8
4,280,662	-		MIT1002_03831	0.33	-0.4
4,280,662	-		MIT1002_03831	0.33	+0.1
4,280,682	-		MIT1002_03831	0.36	+2.4
4,280,922	+		MIT1002_03831	0.67	-0.6
4,280,922	+		MIT1002_03831	0.67	+1.6
4,280,930	+		MIT1002_03831	0.69	+0.1
4,280,930	-		MIT1002_03831	0.69	-0.7
4,280,944	-		MIT1002_03831	0.70	+0.9
4,280,954	-		MIT1002_03831	0.72	+0.4
4,281,000	-		MIT1002_03831	0.78	+0.1
4,281,063	-		MIT1002_03831	0.86	+0.5
4,281,101	+				-0.1
4,281,107	+				+0.1
4,281,115	-				+0.6
4,281,132	+				+0.5
4,281,140	-				+0.7
4,281,140	-				-1.1
4,281,140	-				-1.3
4,281,146	-				-2.6
4,281,146	-				-0.3
4,281,186	-				-1.5
4,281,270	+				+1.2
4,281,299	+				-0.5
4,281,324	+				+0.7
4,281,341	+				-0.1
4,281,346	-				+0.8
4,281,396	-				+0.4
4,281,427	+				-1.2
4,281,479	+				+0.1
4,281,502	-		MIT1002_03832	0.11	-1.3
4,281,502	-		MIT1002_03832	0.11	+0.2
4,281,508	-		MIT1002_03832	0.11	+0.4
4,281,589	-		MIT1002_03832	0.15	+0.8
4,281,695	+		MIT1002_03832	0.20	-0.0
4,281,695	+		MIT1002_03832	0.20	+1.1
4,281,695	+		MIT1002_03832	0.20	-1.1
4,281,695	+		MIT1002_03832	0.20	-0.0
4,281,703	-		MIT1002_03832	0.20	+0.5
4,281,752	-		MIT1002_03832	0.23	-0.9
4,281,845	+		MIT1002_03832	0.27	-1.1
4,281,853	-		MIT1002_03832	0.28	+1.3
4,281,875	+		MIT1002_03832	0.29	+0.0
4,281,883	-		MIT1002_03832	0.29	+2.5
4,281,883	-		MIT1002_03832	0.29	-1.2
4,281,890	+		MIT1002_03832	0.29	-0.1
4,281,898	-		MIT1002_03832	0.30	+0.4
4,281,908	-		MIT1002_03832	0.30	-0.3
4,281,981	-		MIT1002_03832	0.34	-0.3
4,281,988	+		MIT1002_03832	0.34	+0.1
4,281,988	+		MIT1002_03832	0.34	-2.4
4,281,988	+		MIT1002_03832	0.34	-0.9
4,281,995	+		MIT1002_03832	0.34	+0.6
4,281,995	+		MIT1002_03832	0.34	+0.9
4,282,017	+		MIT1002_03832	0.36	+0.4
4,282,030	-		MIT1002_03832	0.36	+0.0
4,282,044	-		MIT1002_03832	0.37	-0.2
4,282,050	-		MIT1002_03832	0.37	+1.1
4,282,057	-		MIT1002_03832	0.37	-2.5
4,282,077	-		MIT1002_03832	0.38	-2.4
4,282,098	+		MIT1002_03832	0.39	-0.7