Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03810

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
4,254,686	+		MIT1002_03809	0.45	+0.7
4,254,687	+		MIT1002_03809	0.45	-0.4
4,254,695	-		MIT1002_03809	0.46	-0.2
4,254,704	-		MIT1002_03809	0.47	+1.0
4,254,806	-		MIT1002_03809	0.56	-0.6
4,254,810	+		MIT1002_03809	0.56	-1.8
4,254,830	+		MIT1002_03809	0.58	+0.3
4,254,837	-		MIT1002_03809	0.59	-1.2
4,254,838	-		MIT1002_03809	0.59	+0.4
4,254,916	+		MIT1002_03809	0.66	+1.0
4,254,931	-		MIT1002_03809	0.67	+1.7
4,254,978	+		MIT1002_03809	0.71	-1.3
4,254,986	-		MIT1002_03809	0.72	-1.2
4,255,080	+		MIT1002_03809	0.80	-0.7
4,255,088	-		MIT1002_03809	0.81	-1.2
4,255,098	-		MIT1002_03809	0.82	-0.3
4,255,106	+		MIT1002_03809	0.83	+0.2
4,255,106	+		MIT1002_03809	0.83	-0.4
4,255,112	-		MIT1002_03809	0.83	+0.7
4,255,170	-		MIT1002_03809	0.88	-1.3
4,255,207	+				-1.0
4,255,218	-				-0.8
4,255,224	-				-0.4
4,255,249	+				-0.4
4,255,287	-				-0.8
4,255,388	+				+1.2
4,255,407	-				-0.2
4,255,412	-				-0.4
4,255,416	+				+1.0
4,255,439	+				-1.8
4,255,609	+				+0.4
4,255,655	-				+0.2
4,255,666	-		MIT1002_03810	0.11	-0.3
4,255,666	-		MIT1002_03810	0.11	-2.6
4,255,721	+		MIT1002_03810	0.19	-1.3
4,255,726	+		MIT1002_03810	0.20	-1.1
4,255,726	+		MIT1002_03810	0.20	-1.4
4,255,734	-		MIT1002_03810	0.21	-2.8
4,255,747	+		MIT1002_03810	0.23	-0.1
4,255,752	+		MIT1002_03810	0.24	-0.0
4,255,755	-		MIT1002_03810	0.24	-0.9
4,255,755	-		MIT1002_03810	0.24	-1.0
4,255,755	-		MIT1002_03810	0.24	+0.1
4,255,817	+		MIT1002_03810	0.33	+0.4
4,255,845	-		MIT1002_03810	0.37	-0.2
4,255,860	-		MIT1002_03810	0.40	+0.7
4,255,878	+		MIT1002_03810	0.42	-2.3
4,255,878	+		MIT1002_03810	0.42	+0.9
4,255,878	+		MIT1002_03810	0.42	-1.1
4,256,014	+		MIT1002_03810	0.62	+1.1
4,256,046	-		MIT1002_03810	0.67	+0.5
4,256,144	+		MIT1002_03810	0.81	+1.3
4,256,188	+		MIT1002_03810	0.87	+0.5
4,256,196	-		MIT1002_03810	0.88	-0.4
4,256,210	+				-0.4
4,256,229	+				+2.1
4,256,235	-				+0.8
4,256,262	-				+0.5
4,256,277	+				-0.5
4,256,352	-				-0.2
4,256,415	-				-0.4
4,256,456	+		MIT1002_03811	0.13	-1.6
4,256,701	-		MIT1002_03811	0.30	+0.8
4,256,714	-		MIT1002_03811	0.31	-0.5
4,256,727	+		MIT1002_03811	0.32	-0.1
4,256,750	+		MIT1002_03811	0.33	-1.7
4,256,775	+		MIT1002_03811	0.35	+0.2
4,256,775	+		MIT1002_03811	0.35	+1.8
4,256,785	+		MIT1002_03811	0.36	+2.7
4,256,916	+		MIT1002_03811	0.45	+0.3
4,256,916	-		MIT1002_03811	0.45	+0.6
4,257,002	+		MIT1002_03811	0.51	+0.1
4,257,010	-		MIT1002_03811	0.52	-1.8
4,257,048	-		MIT1002_03811	0.54	+1.0
4,257,084	-		MIT1002_03811	0.57	+0.4
4,257,116	+		MIT1002_03811	0.59	-1.4
4,257,116	+		MIT1002_03811	0.59	+0.7
4,257,116	+		MIT1002_03811	0.59	+0.4
4,257,116	+		MIT1002_03811	0.59	+0.7
4,257,124	-		MIT1002_03811	0.59	-1.7
4,257,124	-		MIT1002_03811	0.59	-0.0
4,257,124	-		MIT1002_03811	0.59	-2.3
4,257,124	-		MIT1002_03811	0.59	-1.8
4,257,124	-		MIT1002_03811	0.59	-0.7
4,257,124	-		MIT1002_03811	0.59	-0.8
4,257,131	-		MIT1002_03811	0.60	+1.6
4,257,133	+		MIT1002_03811	0.60	-1.0
4,257,133	+		MIT1002_03811	0.60	-0.5
4,257,141	-		MIT1002_03811	0.61	+2.1
4,257,152	+		MIT1002_03811	0.61	-2.2
4,257,168	+		MIT1002_03811	0.63	+0.4
4,257,185	-		MIT1002_03811	0.64	+1.3
4,257,235	-		MIT1002_03811	0.67	-1.4