Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03806

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
4,251,355	-				+0.7
4,251,661	+		MIT1002_03805	0.35	-0.6
4,252,096	-		MIT1002_03805	0.78	-1.0
4,252,106	+		MIT1002_03805	0.79	-0.1
4,252,114	-		MIT1002_03805	0.80	-2.7
4,252,114	-		MIT1002_03805	0.80	-0.4
4,252,141	+		MIT1002_03805	0.82	+0.7
4,252,246	-				-0.6
4,252,251	-				-2.6
4,252,271	-				-1.3
4,252,476	-		MIT1002_03806	0.29	+0.7
4,252,509	+		MIT1002_03806	0.36	+0.7
4,252,519	-		MIT1002_03806	0.38	-2.9
4,252,636	+		MIT1002_03806	0.61	-1.1
4,252,644	-		MIT1002_03806	0.63	-0.1
4,252,691	-		MIT1002_03806	0.72	-2.6
4,252,691	-		MIT1002_03806	0.72	-4.6
4,252,697	-		MIT1002_03806	0.74	-1.5
4,252,745	-		MIT1002_03806	0.83	+0.1
4,252,803	-				+0.4
4,252,883	+		MIT1002_03807	0.11	-1.5
4,252,891	-		MIT1002_03807	0.12	+0.1
4,252,909	-		MIT1002_03807	0.15	-0.2
4,252,919	+		MIT1002_03807	0.17	+0.6
4,252,919	+		MIT1002_03807	0.17	+0.8
4,252,927	-		MIT1002_03807	0.19	+0.5
4,253,016	-		MIT1002_03807	0.34	+1.1
4,253,021	-		MIT1002_03807	0.35	+1.8
4,253,082	-		MIT1002_03807	0.45	-0.6
4,253,119	+		MIT1002_03807	0.52	-2.1
4,253,127	-		MIT1002_03807	0.53	-0.6
4,253,129	+		MIT1002_03807	0.54	+0.1
4,253,137	-		MIT1002_03807	0.55	+2.7
4,253,178	+		MIT1002_03807	0.62	+0.7
4,253,196	-		MIT1002_03807	0.65	+1.5
4,253,232	+		MIT1002_03807	0.72	+0.5
4,253,232	+		MIT1002_03807	0.72	-0.1
4,253,354	+				+0.1
4,253,375	+				+0.2
4,253,380	+				-1.0
4,253,444	+				+0.2
4,253,446	+				+1.9
4,253,446	+				-0.4
4,253,446	+				+1.7
4,253,453	+				+1.4
4,253,454	-				-0.9
4,253,454	-				+0.7
4,253,461	-				-0.3
4,253,466	+				-0.3
4,253,466	-				+0.6
4,253,466	-				-0.2
4,253,478	+				-0.1
4,253,486	-				+0.4
4,253,624	+		MIT1002_03808	0.17	-2.5
4,253,632	-		MIT1002_03808	0.18	+0.4
4,253,710	-		MIT1002_03808	0.30	-0.4
4,253,766	-		MIT1002_03808	0.39	+0.1
4,253,781	+		MIT1002_03808	0.41	+1.0
4,253,781	+		MIT1002_03808	0.41	+0.4
4,253,789	+		MIT1002_03808	0.42	-0.0
4,253,789	-		MIT1002_03808	0.42	-1.0
4,253,797	-		MIT1002_03808	0.44	+0.1