Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03628

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
4,053,027	-		MIT1002_03626	0.18	-0.5
4,053,096	+		MIT1002_03626	0.29	+0.9
4,053,145	+		MIT1002_03626	0.37	-1.1
4,053,201	+		MIT1002_03626	0.45	-1.0
4,053,312	+		MIT1002_03626	0.63	+0.3
4,053,312	+		MIT1002_03626	0.63	+0.3
4,053,320	-		MIT1002_03626	0.64	-0.8
4,053,320	-		MIT1002_03626	0.64	-0.6
4,053,342	-		MIT1002_03626	0.67	+0.8
4,053,477	-		MIT1002_03626	0.88	-0.1
4,053,479	+		MIT1002_03626	0.89	+0.1
4,053,479	+		MIT1002_03626	0.89	+1.5
4,053,525	-				+0.2
4,053,525	-				-1.2
4,053,625	-				-2.0
4,053,635	+				+0.1
4,053,668	-				-1.2
4,053,683	-				-1.0
4,053,685	+				-0.7
4,053,685	+				+0.0
4,053,690	+				+1.9
4,053,693	-				-0.2
4,053,705	+				+1.5
4,053,707	+				-2.2
4,053,712	+				+0.5
4,053,760	-				+0.3
4,053,762	+				+1.0
4,053,762	+				+0.7
4,053,770	-				-0.1
4,053,781	-				+1.4
4,053,807	-				+0.2
4,053,970	-				-2.9
4,054,127	+		MIT1002_03628	0.82	-2.3
4,054,127	+		MIT1002_03628	0.82	-1.9
4,054,135	-		MIT1002_03628	0.86	-3.7
4,054,155	+				-1.1
4,054,162	-				-1.3
4,054,173	-				-1.8
4,054,204	-				-1.9
4,054,245	+				-2.8
4,054,307	+				-1.3
4,054,307	+				-2.0
4,054,307	+				-1.8
4,054,307	-				-2.2
4,054,315	-				-0.6
4,054,349	-				-1.4
4,054,373	+				-2.6
4,054,373	+				-1.7
4,054,381	-				-1.6
4,054,381	-				-1.1
4,054,381	-				+0.4
4,054,389	-				-0.8