Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03618

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
4,041,758	-		MIT1002_03617	0.51	-0.4
4,041,778	+		MIT1002_03617	0.52	-0.5
4,041,795	+		MIT1002_03617	0.53	+0.3
4,041,797	+		MIT1002_03617	0.53	-1.7
4,041,803	-		MIT1002_03617	0.54	-1.1
4,041,824	-		MIT1002_03617	0.55	-0.8
4,041,831	+		MIT1002_03617	0.56	+0.2
4,041,861	-		MIT1002_03617	0.58	+1.1
4,041,863	+		MIT1002_03617	0.58	+0.8
4,041,869	+		MIT1002_03617	0.58	+0.0
4,041,877	-		MIT1002_03617	0.59	+0.1
4,041,877	-		MIT1002_03617	0.59	-0.8
4,042,111	-		MIT1002_03617	0.75	-1.5
4,042,269	+		MIT1002_03617	0.87	+0.4
4,042,269	+		MIT1002_03617	0.87	+0.5
4,042,284	+		MIT1002_03617	0.88	+0.4
4,042,430	-				+0.6
4,042,441	-				-0.5
4,042,453	-				-0.3
4,042,453	-				-1.2
4,042,453	-				-0.4
4,042,488	+				-1.1
4,042,600	+				-0.1
4,042,617	+				-0.0
4,042,652	+				-0.2
4,042,684	-				-0.3
4,042,691	+				+0.7
4,042,693	+				+0.4
4,042,731	-				+0.0
4,042,753	+				-1.2
4,042,802	+				+0.7
4,042,804	-				-0.2
4,042,810	-				-0.5
4,042,810	-				+0.4
4,042,908	+		MIT1002_03618	0.17	+0.5
4,042,908	+		MIT1002_03618	0.17	-0.6
4,042,908	+		MIT1002_03618	0.17	-0.2
4,042,908	+		MIT1002_03618	0.17	-0.4
4,042,916	-		MIT1002_03618	0.17	-1.8
4,042,916	-		MIT1002_03618	0.17	-0.3
4,042,916	-		MIT1002_03618	0.17	+0.9
4,042,916	-		MIT1002_03618	0.17	+0.3
4,042,991	+		MIT1002_03618	0.25	-0.7
4,042,991	+		MIT1002_03618	0.25	+0.6
4,042,991	+		MIT1002_03618	0.25	-0.3
4,042,991	+		MIT1002_03618	0.25	-0.3
4,042,991	+		MIT1002_03618	0.25	-0.5
4,042,999	-		MIT1002_03618	0.25	+0.1
4,042,999	-		MIT1002_03618	0.25	+0.0
4,042,999	-		MIT1002_03618	0.25	-1.5
4,043,016	+		MIT1002_03618	0.27	+0.1
4,043,038	-		MIT1002_03618	0.29	-0.1
4,043,054	-		MIT1002_03618	0.31	+0.5
4,043,071	+		MIT1002_03618	0.32	-2.1
4,043,099	-		MIT1002_03618	0.35	-1.3
4,043,118	-		MIT1002_03618	0.37	-2.0
4,043,195	+		MIT1002_03618	0.45	-0.3
4,043,195	+		MIT1002_03618	0.45	-2.2
4,043,213	-		MIT1002_03618	0.46	-1.7
4,043,278	-		MIT1002_03618	0.53	-0.8
4,043,348	-		MIT1002_03618	0.59	-0.1
4,043,516	-		MIT1002_03618	0.76	+0.2
4,043,570	+		MIT1002_03618	0.81	-1.3
4,043,570	+		MIT1002_03618	0.81	-1.8
4,043,578	-		MIT1002_03618	0.82	-0.1
4,043,580	+		MIT1002_03618	0.82	+0.5
4,043,580	+		MIT1002_03618	0.82	+0.5
4,043,618	-		MIT1002_03618	0.86	+0.4
4,043,646	+		MIT1002_03618	0.88	-1.5
4,043,751	-				-0.3
4,043,759	+				+0.6
4,043,848	+				-0.7
4,043,848	+				+0.4
4,043,856	-				-0.1
4,043,895	-				+1.1
4,043,899	+				+1.2
4,043,899	+				+0.9
4,043,988	+				-0.9
4,044,048	-				-0.4
4,044,121	+				+0.7
4,044,135	+				+0.5
4,044,143	+				+1.2
4,044,143	+				+0.3
4,044,143	-				-1.9
4,044,151	-				-0.4
4,044,151	-				+0.1
4,044,151	-				-1.0
4,044,151	-				+0.4
4,044,151	-				+0.7
4,044,151	-				+1.1
4,044,240	+				+0.2
4,044,490	-		MIT1002_03619	0.18	-0.4
4,044,570	+		MIT1002_03619	0.21	+0.7
4,044,573	-		MIT1002_03619	0.21	+0.5
4,044,578	-		MIT1002_03619	0.21	-2.7
4,044,578	-		MIT1002_03619	0.21	-0.4
4,044,578	-		MIT1002_03619	0.21	-1.1
4,044,578	-		MIT1002_03619	0.21	-0.2
4,044,595	-		MIT1002_03619	0.22	-0.7
4,044,637	-		MIT1002_03619	0.23	-0.0
4,044,649	+		MIT1002_03619	0.24	+1.4
4,044,655	+		MIT1002_03619	0.24	+0.6
4,044,657	-		MIT1002_03619	0.24	-1.5
4,044,728	-		MIT1002_03619	0.27	-1.5
4,044,754	+		MIT1002_03619	0.28	+1.4
4,044,754	+		MIT1002_03619	0.28	+1.4
4,044,762	-		MIT1002_03619	0.28	+0.6