Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03617

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
4,040,040	-				-1.3
4,040,132	+				-2.1
4,040,132	+				-1.5
4,040,132	+				-1.4
4,040,132	+				-3.9
4,040,140	-				-2.3
4,040,142	+				-0.8
4,040,142	+				-4.8
4,040,170	-				-0.8
4,040,232	+		MIT1002_03616	0.12	-2.7
4,040,245	-		MIT1002_03616	0.14	-1.0
4,040,339	-		MIT1002_03616	0.27	-4.3
4,040,344	+		MIT1002_03616	0.28	-0.9
4,040,349	+		MIT1002_03616	0.29	-1.1
4,040,376	+		MIT1002_03616	0.33	+0.1
4,040,384	-		MIT1002_03616	0.34	-2.7
4,040,454	-		MIT1002_03616	0.44	-2.6
4,040,454	-		MIT1002_03616	0.44	-2.4
4,040,508	-		MIT1002_03616	0.52	-3.3
4,040,517	+		MIT1002_03616	0.53	+0.4
4,040,572	+		MIT1002_03616	0.61	+0.1
4,040,735	+		MIT1002_03616	0.84	-1.5
4,040,849	+				-1.2
4,040,850	+				-0.1
4,040,923	+				+0.7
4,040,974	+				-1.3
4,040,982	-				+1.5
4,040,992	-				-2.0
4,041,066	-				-0.6
4,041,071	-				-0.8
4,041,126	+				-1.4
4,041,139	-				-0.8
4,041,232	+		MIT1002_03617	0.14	-1.1
4,041,235	-		MIT1002_03617	0.14	+0.0
4,041,253	+		MIT1002_03617	0.15	+1.7
4,041,254	+		MIT1002_03617	0.15	+0.2
4,041,254	+		MIT1002_03617	0.15	-0.5
4,041,254	+		MIT1002_03617	0.15	+0.9
4,041,261	-		MIT1002_03617	0.16	-1.5
4,041,261	-		MIT1002_03617	0.16	+0.9
4,041,261	-		MIT1002_03617	0.16	-0.5
4,041,353	-		MIT1002_03617	0.22	+0.4
4,041,356	+		MIT1002_03617	0.22	-1.4
4,041,356	+		MIT1002_03617	0.22	-0.4
4,041,356	+		MIT1002_03617	0.22	+0.3
4,041,356	+		MIT1002_03617	0.22	-0.1
4,041,356	+		MIT1002_03617	0.22	-0.6
4,041,356	+		MIT1002_03617	0.22	+0.4
4,041,356	+		MIT1002_03617	0.22	+0.5
4,041,356	+		MIT1002_03617	0.22	+1.4
4,041,364	+		MIT1002_03617	0.23	-0.2
4,041,364	-		MIT1002_03617	0.23	-0.5
4,041,364	-		MIT1002_03617	0.23	-0.2
4,041,364	-		MIT1002_03617	0.23	+0.2
4,041,364	-		MIT1002_03617	0.23	-0.4
4,041,364	-		MIT1002_03617	0.23	-0.3
4,041,366	+		MIT1002_03617	0.23	+1.1
4,041,372	-		MIT1002_03617	0.23	+0.6
4,041,382	-		MIT1002_03617	0.24	+0.5
4,041,382	-		MIT1002_03617	0.24	-1.2
4,041,382	-		MIT1002_03617	0.24	+0.7
4,041,413	+		MIT1002_03617	0.26	-0.2
4,041,421	-		MIT1002_03617	0.27	+0.1
4,041,439	+		MIT1002_03617	0.28	-0.1
4,041,472	+		MIT1002_03617	0.30	-0.1
4,041,523	+		MIT1002_03617	0.34	-0.4
4,041,554	+		MIT1002_03617	0.36	+1.0
4,041,554	+		MIT1002_03617	0.36	-0.9
4,041,554	+		MIT1002_03617	0.36	-0.3
4,041,554	+		MIT1002_03617	0.36	-2.7
4,041,562	-		MIT1002_03617	0.37	+1.1
4,041,573	+		MIT1002_03617	0.38	-1.0
4,041,573	+		MIT1002_03617	0.38	-0.7
4,041,581	-		MIT1002_03617	0.38	-1.0
4,041,581	-		MIT1002_03617	0.38	-1.6
4,041,581	-		MIT1002_03617	0.38	+0.2
4,041,581	-		MIT1002_03617	0.38	-0.3
4,041,612	+		MIT1002_03617	0.40	+0.3
4,041,625	-		MIT1002_03617	0.41	-0.2
4,041,636	+		MIT1002_03617	0.42	-0.1
4,041,647	+		MIT1002_03617	0.43	+1.0
4,041,758	-		MIT1002_03617	0.51	-0.4
4,041,778	+		MIT1002_03617	0.52	-0.5
4,041,795	+		MIT1002_03617	0.53	+0.3
4,041,797	+		MIT1002_03617	0.53	-1.7
4,041,803	-		MIT1002_03617	0.54	-1.1
4,041,824	-		MIT1002_03617	0.55	-0.8
4,041,831	+		MIT1002_03617	0.56	+0.2
4,041,861	-		MIT1002_03617	0.58	+1.1
4,041,863	+		MIT1002_03617	0.58	+0.8
4,041,869	+		MIT1002_03617	0.58	+0.0
4,041,877	-		MIT1002_03617	0.59	+0.1
4,041,877	-		MIT1002_03617	0.59	-0.8
4,042,111	-		MIT1002_03617	0.75	-1.5
4,042,269	+		MIT1002_03617	0.87	+0.4
4,042,269	+		MIT1002_03617	0.87	+0.5
4,042,284	+		MIT1002_03617	0.88	+0.4
4,042,430	-				+0.6
4,042,441	-				-0.5
4,042,453	-				-0.3
4,042,453	-				-1.2
4,042,453	-				-0.4
4,042,488	+				-1.1
4,042,600	+				-0.1
4,042,617	+				-0.0
4,042,652	+				-0.2
4,042,684	-				-0.3
4,042,691	+				+0.7
4,042,693	+				+0.4
4,042,731	-				+0.0
4,042,753	+				-1.2
4,042,802	+				+0.7
4,042,804	-				-0.2
4,042,810	-				-0.5
4,042,810	-				+0.4
4,042,908	+		MIT1002_03618	0.17	+0.5
4,042,908	+		MIT1002_03618	0.17	-0.6
4,042,908	+		MIT1002_03618	0.17	-0.2
4,042,908	+		MIT1002_03618	0.17	-0.4
4,042,916	-		MIT1002_03618	0.17	-1.8
4,042,916	-		MIT1002_03618	0.17	-0.3
4,042,916	-		MIT1002_03618	0.17	+0.9
4,042,916	-		MIT1002_03618	0.17	+0.3
4,042,991	+		MIT1002_03618	0.25	-0.7
4,042,991	+		MIT1002_03618	0.25	+0.6
4,042,991	+		MIT1002_03618	0.25	-0.3
4,042,991	+		MIT1002_03618	0.25	-0.3
4,042,991	+		MIT1002_03618	0.25	-0.5
4,042,999	-		MIT1002_03618	0.25	+0.1
4,042,999	-		MIT1002_03618	0.25	+0.0
4,042,999	-		MIT1002_03618	0.25	-1.5
4,043,016	+		MIT1002_03618	0.27	+0.1
4,043,038	-		MIT1002_03618	0.29	-0.1
4,043,054	-		MIT1002_03618	0.31	+0.5
4,043,071	+		MIT1002_03618	0.32	-2.1
4,043,099	-		MIT1002_03618	0.35	-1.3
4,043,118	-		MIT1002_03618	0.37	-2.0
4,043,195	+		MIT1002_03618	0.45	-0.3
4,043,195	+		MIT1002_03618	0.45	-2.2
4,043,213	-		MIT1002_03618	0.46	-1.7
4,043,278	-		MIT1002_03618	0.53	-0.8
4,043,348	-		MIT1002_03618	0.59	-0.1