Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03492

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,899,945	+		MIT1002_03491	0.68	-0.5
3,899,983	-		MIT1002_03491	0.69	-0.1
3,900,022	-		MIT1002_03491	0.71	-1.2
3,900,043	-		MIT1002_03491	0.71	-0.2
3,900,048	+		MIT1002_03491	0.72	+0.3
3,900,061	+		MIT1002_03491	0.72	-1.8
3,900,130	+		MIT1002_03491	0.75	-0.2
3,900,177	+		MIT1002_03491	0.77	-0.2
3,900,208	+		MIT1002_03491	0.78	-0.9
3,900,242	-		MIT1002_03491	0.79	-0.1
3,900,252	+		MIT1002_03491	0.79	-0.4
3,900,260	-		MIT1002_03491	0.80	-0.8
3,900,260	-		MIT1002_03491	0.80	-0.8
3,900,318	-		MIT1002_03491	0.82	-0.3
3,900,346	-		MIT1002_03491	0.83	+0.2
3,900,366	+		MIT1002_03491	0.84	-0.5
3,900,493	+		MIT1002_03491	0.89	-1.5
3,900,496	-		MIT1002_03491	0.89	-0.6
3,900,515	+		MIT1002_03491	0.89	-3.1
3,900,523	-		MIT1002_03491	0.90	+0.3
3,900,542	-				+2.6
3,900,543	-				-1.6
3,900,543	-				+0.6
3,900,620	+				-0.2
3,900,628	-				+0.1
3,900,706	+				+0.1
3,900,714	-				-0.2
3,900,728	+				+0.2
3,900,728	+				-0.4
3,900,736	-				-1.2
3,900,777	+				-1.5
3,900,777	+				+0.6
3,900,785	-				-0.2
3,900,785	-				-1.0
3,900,785	-				+0.4
3,900,785	-				+0.4
3,900,785	-				-0.2
3,900,787	+				-0.1
3,900,790	-				-0.7
3,900,888	+				+0.7
3,901,948	-				-2.9
3,902,038	+				+1.2
3,902,038	+				+1.1
3,902,086	+				+0.8
3,902,110	+				+0.7
3,902,178	-		MIT1002_03493	0.13	+1.1
3,902,183	+		MIT1002_03493	0.14	-1.9
3,902,215	+		MIT1002_03493	0.21	-1.5
3,902,215	+		MIT1002_03493	0.21	-2.8
3,902,221	+		MIT1002_03493	0.23	-0.4
3,902,320	+		MIT1002_03493	0.44	-2.4
3,902,320	+		MIT1002_03493	0.44	-3.0
3,902,331	+		MIT1002_03493	0.46	-0.9
3,902,376	-		MIT1002_03493	0.56	-3.6
3,902,412	+		MIT1002_03493	0.64	-1.8
3,902,602	+				-0.9
3,902,607	+				-0.6
3,902,614	+				+0.2
3,902,744	+		MIT1002_03494	0.14	+1.7
3,902,744	+		MIT1002_03494	0.14	+0.3
3,902,744	+		MIT1002_03494	0.14	-0.5
3,902,744	+		MIT1002_03494	0.14	-2.2
3,902,744	+		MIT1002_03494	0.14	-0.2
3,902,752	-		MIT1002_03494	0.16	-0.2
3,902,754	+		MIT1002_03494	0.16	+0.2
3,902,754	+		MIT1002_03494	0.16	+0.6
3,902,762	-		MIT1002_03494	0.17	+0.9
3,902,764	-		MIT1002_03494	0.17	-0.0
3,902,764	-		MIT1002_03494	0.17	-0.7
3,902,808	+		MIT1002_03494	0.24	+1.1
3,902,810	-		MIT1002_03494	0.24	+0.6
3,902,816	-		MIT1002_03494	0.25	-1.1
3,902,849	+		MIT1002_03494	0.30	+0.5