Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03445

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,851,837	+		MIT1002_03444	0.65	-0.3
3,851,868	-		MIT1002_03444	0.67	-1.2
3,851,898	-		MIT1002_03444	0.68	+0.4
3,852,002	+		MIT1002_03444	0.73	-0.4
3,852,012	+		MIT1002_03444	0.73	+1.3
3,852,012	+		MIT1002_03444	0.73	-1.2
3,852,012	+		MIT1002_03444	0.73	-0.6
3,852,012	+		MIT1002_03444	0.73	+0.8
3,852,015	-		MIT1002_03444	0.73	-1.1
3,852,020	-		MIT1002_03444	0.74	-1.0
3,852,020	-		MIT1002_03444	0.74	-2.3
3,852,030	-		MIT1002_03444	0.74	+0.3
3,852,046	-		MIT1002_03444	0.75	-0.2
3,852,057	-		MIT1002_03444	0.75	+0.3
3,852,148	+		MIT1002_03444	0.80	+0.4
3,852,170	+		MIT1002_03444	0.81	-1.5
3,852,191	+		MIT1002_03444	0.82	-0.0
3,852,201	-		MIT1002_03444	0.82	+2.0
3,852,210	+		MIT1002_03444	0.82	-1.5
3,852,232	-		MIT1002_03444	0.83	+1.5
3,852,242	-		MIT1002_03444	0.84	-0.1
3,852,296	+		MIT1002_03444	0.86	-0.5
3,852,302	-		MIT1002_03444	0.87	+0.1
3,852,303	+		MIT1002_03444	0.87	+1.4
3,852,304	-		MIT1002_03444	0.87	-0.7
3,852,309	-		MIT1002_03444	0.87	+0.8
3,852,331	-		MIT1002_03444	0.88	-0.7
3,852,349	-		MIT1002_03444	0.89	+0.3
3,852,349	-		MIT1002_03444	0.89	+3.5
3,852,368	-		MIT1002_03444	0.90	-0.1
3,852,409	+				-0.0
3,852,452	+				-3.2
3,852,462	+				-2.8
3,852,462	+				+0.5
3,852,462	+				-1.7
3,852,470	-				-0.3
3,852,470	-				+0.1
3,852,606	-				-1.4
3,852,606	-				+0.3
3,852,628	+				+0.7
3,852,682	+				+0.5
3,852,744	-				-0.3
3,852,768	+				+3.8
3,852,847	-				-1.7
3,852,854	+				-0.4
3,852,871	+		MIT1002_03445	0.11	+0.0
3,852,969	+		MIT1002_03445	0.37	-0.3
3,852,977	-		MIT1002_03445	0.39	+0.4
3,853,005	-		MIT1002_03445	0.47	-0.2
3,853,030	+		MIT1002_03445	0.53	-0.4
3,853,032	-		MIT1002_03445	0.54	+1.6
3,853,057	-		MIT1002_03445	0.61	+1.0
3,853,089	+		MIT1002_03445	0.69	+0.6
3,853,097	-		MIT1002_03445	0.71	-2.8
3,853,132	-		MIT1002_03445	0.81	+0.8
3,853,134	-		MIT1002_03445	0.81	+1.0
3,853,248	+				-2.4
3,853,248	-				+0.6
3,853,250	+				+1.0
3,853,268	+				-0.6
3,853,270	-				-0.3
3,853,276	-				-0.6
3,853,280	+				-1.1
3,853,286	-		MIT1002_03446	0.11	-1.4
3,853,382	+		MIT1002_03446	0.26	+0.1
3,853,409	-		MIT1002_03446	0.30	-1.6
3,853,511	-		MIT1002_03446	0.46	+0.2
3,853,539	-		MIT1002_03446	0.50	+0.2
3,853,566	+		MIT1002_03446	0.54	-0.1
3,853,566	+		MIT1002_03446	0.54	+0.0
3,853,934	-				-1.9
3,853,942	+				-0.2
3,853,944	-				+0.9
3,853,961	-				+0.1
3,853,971	+				+3.1
3,853,971	+				+0.6
3,853,971	+				-0.7
3,853,971	-				-0.3
3,853,979	-				-0.2
3,853,979	-				-2.0
3,853,985	-				-0.4
3,854,016	+				+1.0
3,854,047	+				-1.6
3,854,085	+				-0.8
3,854,093	-				-0.3
3,854,188	+		MIT1002_03447	0.12	+0.4
3,854,189	-		MIT1002_03447	0.12	+2.4
3,854,189	-		MIT1002_03447	0.12	-0.4
3,854,189	-		MIT1002_03447	0.12	+0.1
3,854,204	+		MIT1002_03447	0.14	-0.5