Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03360

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,758,831	+				-0.2
3,758,862	+				+1.5
3,758,935	-		MIT1002_03359	0.14	+1.3
3,758,983	-		MIT1002_03359	0.22	+1.0
3,758,997	+		MIT1002_03359	0.25	-0.0
3,759,022	+		MIT1002_03359	0.29	+0.8
3,759,178	+		MIT1002_03359	0.56	+0.1
3,759,231	+		MIT1002_03359	0.65	-1.7
3,759,267	+		MIT1002_03359	0.71	+0.4
3,759,287	+		MIT1002_03359	0.75	+0.3
3,759,320	+		MIT1002_03359	0.80	-0.2
3,759,322	+		MIT1002_03359	0.81	+0.0
3,759,322	+		MIT1002_03359	0.81	+0.1
3,759,322	-		MIT1002_03359	0.81	-0.4
3,759,330	-		MIT1002_03359	0.82	+0.6
3,759,426	-				+0.0
3,759,431	-				-0.5
3,759,798	+				+1.2
3,759,799	+				-0.5
3,759,877	+				+0.5
3,759,977	+		MIT1002_03360	0.10	-1.5
3,760,034	+		MIT1002_03360	0.13	+0.9
3,760,034	+		MIT1002_03360	0.13	-1.4
3,760,034	+		MIT1002_03360	0.13	-1.6
3,760,034	+		MIT1002_03360	0.13	+0.7
3,760,042	-		MIT1002_03360	0.14	-1.6
3,760,042	-		MIT1002_03360	0.14	+1.0
3,760,057	+		MIT1002_03360	0.15	-0.3
3,760,057	+		MIT1002_03360	0.15	+0.6
3,760,057	+		MIT1002_03360	0.15	+0.0
3,760,065	-		MIT1002_03360	0.15	-0.2
3,760,065	-		MIT1002_03360	0.15	-0.9
3,760,065	-		MIT1002_03360	0.15	-0.6
3,760,065	-		MIT1002_03360	0.15	-0.6
3,760,090	+		MIT1002_03360	0.17	+1.7
3,760,098	+		MIT1002_03360	0.17	-0.0
3,760,135	-		MIT1002_03360	0.19	-0.7
3,760,142	-		MIT1002_03360	0.20	-2.0
3,760,201	+		MIT1002_03360	0.23	+0.1
3,760,261	+		MIT1002_03360	0.26	-0.2
3,760,279	-		MIT1002_03360	0.27	+0.6
3,760,284	-		MIT1002_03360	0.28	+0.4
3,760,284	-		MIT1002_03360	0.28	+0.0
3,760,284	-		MIT1002_03360	0.28	-0.2
3,760,297	+		MIT1002_03360	0.28	-1.2
3,760,407	+		MIT1002_03360	0.35	-1.5
3,760,516	-		MIT1002_03360	0.41	-0.5
3,760,562	+		MIT1002_03360	0.44	-0.4
3,760,563	-		MIT1002_03360	0.44	-0.8
3,760,621	+		MIT1002_03360	0.47	+1.2
3,760,629	-		MIT1002_03360	0.48	+0.0
3,760,666	-		MIT1002_03360	0.50	-0.7
3,760,671	-		MIT1002_03360	0.50	+0.6
3,760,691	+		MIT1002_03360	0.51	-1.1
3,760,698	+		MIT1002_03360	0.51	-1.0
3,760,709	-		MIT1002_03360	0.52	+1.1
3,760,729	+		MIT1002_03360	0.53	-1.5
3,760,737	-		MIT1002_03360	0.54	-0.2
3,760,737	-		MIT1002_03360	0.54	-2.7
3,760,737	-		MIT1002_03360	0.54	+0.3
3,760,737	-		MIT1002_03360	0.54	+0.3
3,760,825	+		MIT1002_03360	0.59	-0.2
3,760,833	-		MIT1002_03360	0.59	+0.3
3,760,835	+		MIT1002_03360	0.59	+0.2
3,760,835	+		MIT1002_03360	0.59	+1.0
3,760,843	-		MIT1002_03360	0.60	+2.0
3,760,843	-		MIT1002_03360	0.60	-0.2
3,760,858	-		MIT1002_03360	0.61	+0.2
3,760,894	+		MIT1002_03360	0.63	-0.3
3,760,895	+		MIT1002_03360	0.63	-0.1
3,760,911	+		MIT1002_03360	0.64	+1.0
3,760,911	+		MIT1002_03360	0.64	+0.2
3,760,911	+		MIT1002_03360	0.64	-1.0
3,760,911	+		MIT1002_03360	0.64	+0.1
3,760,919	-		MIT1002_03360	0.64	-2.1
3,760,919	-		MIT1002_03360	0.64	-0.1
3,760,919	-		MIT1002_03360	0.64	-1.0
3,760,919	-		MIT1002_03360	0.64	+0.5
3,760,919	-		MIT1002_03360	0.64	+0.0
3,760,919	-		MIT1002_03360	0.64	-0.8
3,760,962	+		MIT1002_03360	0.67	-1.0
3,760,986	+		MIT1002_03360	0.68	+0.6
3,761,014	+		MIT1002_03360	0.70	-0.2
3,761,014	+		MIT1002_03360	0.70	-1.0
3,761,047	+		MIT1002_03360	0.72	-0.1
3,761,080	-		MIT1002_03360	0.73	+0.0
3,761,143	-		MIT1002_03360	0.77	+3.3
3,761,262	-		MIT1002_03360	0.84	+1.6
3,761,371	+				+1.2
3,761,437	+				+1.3
3,761,445	+				-0.4
3,761,456	-				-2.3
3,761,464	-				-0.2
3,761,524	-				-1.8
3,761,532	-				+0.1
3,761,536	+				+0.6
3,761,551	+				+1.3
3,761,566	-				+0.0
3,762,309	+				-2.3
3,762,361	-				-0.1