Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03358

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,755,317	+		MIT1002_03357	0.45	-0.2
3,755,325	-		MIT1002_03357	0.46	+0.6
3,755,330	-		MIT1002_03357	0.47	+0.6
3,755,404	-		MIT1002_03357	0.54	-0.9
3,755,477	+		MIT1002_03357	0.61	-1.2
3,755,477	+		MIT1002_03357	0.61	+0.4
3,755,485	-		MIT1002_03357	0.62	-1.3
3,755,554	-		MIT1002_03357	0.68	-0.6
3,755,569	-		MIT1002_03357	0.70	+0.8
3,755,590	+		MIT1002_03357	0.72	+0.1
3,755,623	-		MIT1002_03357	0.75	+0.1
3,755,748	-		MIT1002_03357	0.87	-0.4
3,755,788	+				+0.6
3,755,917	-				-0.4
3,755,953	-				-1.8
3,756,020	-				-0.6
3,756,025	-				+0.8
3,756,070	+				+1.9
3,756,248	+				+1.0
3,756,248	+				-0.4
3,756,248	+				+0.5
3,756,248	+				-0.9
3,756,256	-				-0.5
3,756,261	-				+1.3
3,756,261	-				-0.7
3,756,274	-				+1.8
3,756,306	+				+0.3
3,756,629	+		MIT1002_03358	0.16	-0.1
3,756,637	-		MIT1002_03358	0.17	+0.2
3,756,637	-		MIT1002_03358	0.17	-0.2
3,756,639	+		MIT1002_03358	0.17	+1.1
3,756,704	+		MIT1002_03358	0.20	+0.3
3,756,710	-		MIT1002_03358	0.20	-0.4
3,756,722	-		MIT1002_03358	0.21	-1.3
3,756,789	+		MIT1002_03358	0.23	-0.1
3,756,789	+		MIT1002_03358	0.23	+0.3
3,756,898	+		MIT1002_03358	0.28	+1.1
3,756,913	+		MIT1002_03358	0.29	+1.7
3,756,996	-		MIT1002_03358	0.32	-0.7
3,757,088	+		MIT1002_03358	0.36	-0.1
3,757,144	-		MIT1002_03358	0.39	-0.9
3,757,153	+		MIT1002_03358	0.39	+0.6
3,757,186	+		MIT1002_03358	0.41	+0.5
3,757,194	-		MIT1002_03358	0.41	-0.0
3,757,205	+		MIT1002_03358	0.41	+1.0
3,757,237	-		MIT1002_03358	0.43	+0.6
3,757,318	-		MIT1002_03358	0.46	+1.2
3,757,338	+		MIT1002_03358	0.47	+1.3
3,757,348	+		MIT1002_03358	0.48	-1.4
3,757,375	-		MIT1002_03358	0.49	-0.5
3,757,375	-		MIT1002_03358	0.49	-2.6
3,757,406	+		MIT1002_03358	0.50	+1.9
3,757,480	+		MIT1002_03358	0.53	-1.0
3,757,481	+		MIT1002_03358	0.53	+1.0
3,757,488	-		MIT1002_03358	0.54	-1.3
3,757,537	+		MIT1002_03358	0.56	+0.6
3,757,545	-		MIT1002_03358	0.56	+1.1
3,757,545	-		MIT1002_03358	0.56	-1.3
3,757,581	+		MIT1002_03358	0.58	+0.0
3,757,581	+		MIT1002_03358	0.58	-0.2
3,757,640	-		MIT1002_03358	0.60	-0.3
3,757,680	-		MIT1002_03358	0.62	-0.1
3,757,720	+		MIT1002_03358	0.64	+0.2
3,757,727	+		MIT1002_03358	0.64	-0.1
3,757,776	-		MIT1002_03358	0.66	-0.9
3,757,776	-		MIT1002_03358	0.66	+0.6
3,757,823	-		MIT1002_03358	0.68	+0.3
3,757,894	-		MIT1002_03358	0.71	+0.7
3,758,046	-		MIT1002_03358	0.78	+1.8
3,758,046	-		MIT1002_03358	0.78	-1.1
3,758,048	-		MIT1002_03358	0.78	-0.9
3,758,067	+		MIT1002_03358	0.79	+0.6
3,758,126	-		MIT1002_03358	0.81	-0.2
3,758,127	+		MIT1002_03358	0.82	+0.3
3,758,127	+		MIT1002_03358	0.82	+0.0
3,758,127	+		MIT1002_03358	0.82	+0.1
3,758,140	-		MIT1002_03358	0.82	+1.3
3,758,140	-		MIT1002_03358	0.82	+1.2
3,758,178	-		MIT1002_03358	0.84	+0.2
3,758,211	-		MIT1002_03358	0.85	+0.4
3,758,225	-		MIT1002_03358	0.86	+0.0
3,758,246	+		MIT1002_03358	0.87	-0.9
3,758,295	+		MIT1002_03358	0.89	-0.3
3,758,306	+		MIT1002_03358	0.89	+0.3
3,758,306	+		MIT1002_03358	0.89	-0.6
3,758,306	+		MIT1002_03358	0.89	+0.3
3,758,306	+		MIT1002_03358	0.89	+0.1
3,758,314	-		MIT1002_03358	0.90	+0.4
3,758,314	-		MIT1002_03358	0.90	-1.1
3,758,314	-		MIT1002_03358	0.90	+1.4
3,758,338	+				-0.7
3,758,406	-				-0.1
3,758,408	-				+1.1
3,758,554	-				-0.9
3,758,574	-				-0.9
3,758,578	+				-0.6
3,758,593	+				+0.4
3,758,594	-				-0.1
3,758,655	-				+0.1
3,758,775	+				+1.9
3,758,786	-				+0.6
3,758,788	+				-0.5
3,758,788	-				-1.2
3,758,801	+				+2.0
3,758,831	+				-0.2
3,758,862	+				+1.5
3,758,935	-		MIT1002_03359	0.14	+1.3
3,758,983	-		MIT1002_03359	0.22	+1.0
3,758,997	+		MIT1002_03359	0.25	-0.0
3,759,022	+		MIT1002_03359	0.29	+0.8
3,759,178	+		MIT1002_03359	0.56	+0.1
3,759,231	+		MIT1002_03359	0.65	-1.7
3,759,267	+		MIT1002_03359	0.71	+0.4
3,759,287	+		MIT1002_03359	0.75	+0.3
3,759,320	+		MIT1002_03359	0.80	-0.2
3,759,322	+		MIT1002_03359	0.81	+0.0
3,759,322	+		MIT1002_03359	0.81	+0.1
3,759,322	-		MIT1002_03359	0.81	-0.4
3,759,330	-		MIT1002_03359	0.82	+0.6
3,759,426	-				+0.0
3,759,431	-				-0.5