Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03290

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,664,276	+		MIT1002_03289	0.25	-1.0
3,664,284	+		MIT1002_03289	0.26	-1.4
3,664,292	-		MIT1002_03289	0.27	-0.5
3,664,292	-		MIT1002_03289	0.27	-1.0
3,664,292	-		MIT1002_03289	0.27	-1.4
3,664,373	+		MIT1002_03289	0.34	+1.8
3,664,453	-		MIT1002_03289	0.41	-1.6
3,664,458	+		MIT1002_03289	0.41	-0.4
3,664,458	+		MIT1002_03289	0.41	-1.2
3,664,466	-		MIT1002_03289	0.42	-0.4
3,664,485	-		MIT1002_03289	0.43	-0.7
3,664,579	-		MIT1002_03289	0.52	-1.7
3,664,614	+		MIT1002_03289	0.55	-0.2
3,664,644	+		MIT1002_03289	0.57	-2.0
3,664,679	+		MIT1002_03289	0.60	-0.4
3,664,762	-		MIT1002_03289	0.67	-0.6
3,664,787	-		MIT1002_03289	0.70	-3.6
3,664,800	-		MIT1002_03289	0.71	-1.3
3,664,868	+		MIT1002_03289	0.76	-1.1
3,664,974	-		MIT1002_03289	0.86	-0.7
3,664,998	-		MIT1002_03289	0.88	-1.7
3,665,069	-				-1.0
3,665,079	-				-2.7
3,665,086	-				-1.0
3,665,089	-				-0.7
3,665,136	+				+0.3
3,665,176	+				+0.8
3,665,184	-				-0.9
3,665,191	-				-0.8
3,665,191	-				-0.9
3,665,203	+				+0.2
3,665,233	-				-1.7
3,665,278	+				-2.2
3,665,322	-				-1.6
3,665,347	+				+0.5
3,665,369	-				-2.5
3,665,393	+				-1.4
3,665,485	-		MIT1002_03290	0.15	-3.8
3,665,491	-		MIT1002_03290	0.15	-1.6
3,665,514	-		MIT1002_03290	0.16	+1.1
3,665,541	-		MIT1002_03290	0.18	-2.2
3,665,571	-		MIT1002_03290	0.20	-1.5
3,665,683	+		MIT1002_03290	0.26	-2.5
3,665,690	+		MIT1002_03290	0.27	+0.0
3,665,706	-		MIT1002_03290	0.27	+1.3
3,665,709	+		MIT1002_03290	0.28	-1.4
3,665,717	-		MIT1002_03290	0.28	-3.8
3,665,755	+		MIT1002_03290	0.30	-2.7
3,665,773	-		MIT1002_03290	0.31	-2.7
3,665,782	+		MIT1002_03290	0.32	-0.4
3,665,792	+		MIT1002_03290	0.32	-0.7
3,665,800	-		MIT1002_03290	0.33	-1.4
3,665,801	+		MIT1002_03290	0.33	-1.6
3,665,809	-		MIT1002_03290	0.33	-1.1
3,665,824	+		MIT1002_03290	0.34	-1.5
3,665,847	+		MIT1002_03290	0.36	+0.8
3,665,847	+		MIT1002_03290	0.36	+0.7
3,665,847	+		MIT1002_03290	0.36	-1.9
3,665,855	-		MIT1002_03290	0.36	-3.2
3,665,855	-		MIT1002_03290	0.36	-0.7
3,665,883	+		MIT1002_03290	0.38	-4.5
3,665,883	+		MIT1002_03290	0.38	-3.4
3,665,883	+		MIT1002_03290	0.38	-1.2
3,665,891	-		MIT1002_03290	0.38	-1.0
3,665,961	-		MIT1002_03290	0.42	-1.6
3,665,981	-		MIT1002_03290	0.43	-0.8
3,666,034	+		MIT1002_03290	0.46	-1.9
3,666,039	+		MIT1002_03290	0.47	-1.2
3,666,039	+		MIT1002_03290	0.47	-2.1
3,666,047	-		MIT1002_03290	0.47	-3.8
3,666,047	-		MIT1002_03290	0.47	-2.7
3,666,047	-		MIT1002_03290	0.47	-2.3
3,666,291	-		MIT1002_03290	0.61	+0.9
3,666,308	+		MIT1002_03290	0.62	-2.0
3,666,433	+		MIT1002_03290	0.69	-2.0
3,666,433	+		MIT1002_03290	0.69	-2.0
3,666,487	+		MIT1002_03290	0.72	-1.0
3,666,518	-		MIT1002_03290	0.74	+0.0
3,666,565	-		MIT1002_03290	0.77	-1.6
3,666,590	+		MIT1002_03290	0.78	-1.5
3,666,739	-		MIT1002_03290	0.87	-1.2
3,666,762	+		MIT1002_03290	0.88	-0.2
3,666,770	-		MIT1002_03290	0.89	-3.7
3,666,830	+				-2.1
3,666,863	-				-0.1
3,666,921	-				-2.0
3,666,953	-				+0.5
3,667,011	+				+1.0
3,667,019	-				+1.2
3,667,019	-				-0.5
3,667,019	-				-1.2
3,667,019	-				-0.4
3,667,043	+				-1.2
3,667,051	-				-0.9
3,667,104	+				-0.5
3,667,123	+				-0.1
3,667,133	+				-1.5
3,667,133	+				-0.2
3,667,133	+				-0.0
3,667,141	-				-0.9
3,667,142	+				+0.2
3,667,143	+				+0.2
3,667,196	-				-0.6
3,667,205	+				+0.9
3,667,210	-				-3.5
3,667,240	+				-1.7
3,667,240	+				+0.2
3,667,248	+				-3.0
3,667,256	+				+0.8
3,667,256	+				-2.4
3,667,302	+				-2.8
3,667,334	-				+1.4
3,667,336	+		MIT1002_03291	0.10	-0.3
3,667,338	+		MIT1002_03291	0.10	-1.5
3,667,338	+		MIT1002_03291	0.10	-0.2
3,667,346	-		MIT1002_03291	0.10	-0.9
3,667,355	+		MIT1002_03291	0.11	-1.7
3,667,424	+		MIT1002_03291	0.14	-2.7
3,667,437	+		MIT1002_03291	0.14	-2.1
3,667,445	-		MIT1002_03291	0.14	+0.0
3,667,480	-		MIT1002_03291	0.16	-2.0
3,667,514	+		MIT1002_03291	0.17	-0.7
3,667,517	-		MIT1002_03291	0.17	+0.6
3,667,536	+		MIT1002_03291	0.18	-1.7
3,667,550	+		MIT1002_03291	0.19	-0.4
3,667,601	-		MIT1002_03291	0.21	-1.7
3,667,610	-		MIT1002_03291	0.21	+0.5
3,667,625	+		MIT1002_03291	0.22	-0.3
3,667,683	+		MIT1002_03291	0.24	-1.3
3,667,725	-		MIT1002_03291	0.26	-1.1
3,667,742	+		MIT1002_03291	0.26	-1.8
3,667,748	-		MIT1002_03291	0.27	-0.9
3,667,885	-		MIT1002_03291	0.32	-0.6
3,667,909	+		MIT1002_03291	0.33	-1.3
3,667,936	-		MIT1002_03291	0.34	-1.3
3,667,952	+		MIT1002_03291	0.35	+0.3
3,667,952	+		MIT1002_03291	0.35	+0.9
3,667,960	-		MIT1002_03291	0.35	+0.3
3,667,961	-		MIT1002_03291	0.35	+0.1