Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02985

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,322,583	+		MIT1002_02984	0.30	+0.4
3,322,591	-		MIT1002_02984	0.31	+0.2
3,322,591	-		MIT1002_02984	0.31	-0.2
3,322,613	-		MIT1002_02984	0.32	-0.8
3,322,897	-		MIT1002_02984	0.54	+3.0
3,322,918	+		MIT1002_02984	0.55	-1.3
3,322,939	-		MIT1002_02984	0.57	-0.1
3,323,009	-		MIT1002_02984	0.62	+0.2
3,323,070	+		MIT1002_02984	0.67	+1.3
3,323,070	+		MIT1002_02984	0.67	+1.7
3,323,076	-		MIT1002_02984	0.67	-0.5
3,323,076	-		MIT1002_02984	0.67	-1.5
3,323,133	+		MIT1002_02984	0.72	+0.1
3,323,141	-		MIT1002_02984	0.72	+0.0
3,323,249	+		MIT1002_02984	0.80	+0.3
3,323,311	-		MIT1002_02984	0.85	+0.8
3,323,332	+		MIT1002_02984	0.87	-0.6
3,323,350	-		MIT1002_02984	0.88	+0.2
3,323,373	+		MIT1002_02984	0.90	-1.8
3,323,449	+				+0.4
3,323,451	-				-0.4
3,323,457	-				+1.7
3,323,462	-				-1.8
3,323,572	-				+0.5
3,323,590	+				-3.4
3,323,705	-		MIT1002_02985	0.22	-1.6
3,323,707	+		MIT1002_02985	0.22	-1.0
3,323,720	+		MIT1002_02985	0.25	+0.0
3,323,808	-		MIT1002_02985	0.40	-0.8
3,323,813	+		MIT1002_02985	0.41	-3.1
3,323,821	-		MIT1002_02985	0.43	+0.4
3,323,821	-		MIT1002_02985	0.43	-0.6
3,323,838	-		MIT1002_02985	0.46	-0.6
3,323,838	-		MIT1002_02985	0.46	+0.7
3,323,840	+		MIT1002_02985	0.46	+0.4
3,323,840	+		MIT1002_02985	0.46	+0.4
3,323,960	-		MIT1002_02985	0.67	+1.0
3,323,962	-		MIT1002_02985	0.67	-0.6
3,323,992	-		MIT1002_02985	0.73	-0.8
3,323,992	-		MIT1002_02985	0.73	-0.5
3,323,992	-		MIT1002_02985	0.73	-0.6
3,324,048	-		MIT1002_02985	0.83	-3.4
3,324,079	-		MIT1002_02985	0.88	+0.1
3,324,115	-				+0.1
3,324,165	-				+0.3
3,324,199	-				-0.1
3,324,288	-				-0.3
3,324,300	-				-0.1
3,324,338	+				+0.1
3,324,351	-				-0.9
3,324,356	-				-0.7
3,324,358	+				+1.7
3,324,360	+				-0.3
3,324,360	+				+0.1
3,324,360	+				+1.3
3,324,368	-				+0.5
3,324,368	-				+1.4
3,324,368	-				-1.3
3,324,370	+				-0.6
3,324,384	+				+1.1
3,324,404	+				-0.9
3,324,522	+		MIT1002_02986	0.17	-0.3
3,324,522	+		MIT1002_02986	0.17	-4.1
3,324,522	+		MIT1002_02986	0.17	-0.4
3,324,530	-		MIT1002_02986	0.20	+1.5
3,324,711	+		MIT1002_02986	0.80	-0.4
3,324,711	+		MIT1002_02986	0.80	-0.5
3,324,719	-		MIT1002_02986	0.82	-1.8
3,324,792	+				-0.9
3,324,809	-				-3.0
3,324,936	-				+0.2
3,325,002	-				-1.2
3,325,002	-				+2.1
3,325,011	+				+0.8
3,325,023	-				-1.7
3,325,026	+				-1.7
3,325,062	-		MIT1002_02988	0.13	+1.2
3,325,064	+		MIT1002_02988	0.13	-0.3
3,325,072	-		MIT1002_02988	0.14	+1.1