Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02848

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,158,341	+		MIT1002_02847	0.43	-2.5
3,158,344	-		MIT1002_02847	0.44	+0.7
3,158,351	-		MIT1002_02847	0.44	+0.1
3,158,356	+		MIT1002_02847	0.45	+2.7
3,158,377	+		MIT1002_02847	0.46	+1.2
3,158,377	+		MIT1002_02847	0.46	+1.0
3,158,414	+		MIT1002_02847	0.49	+0.3
3,158,414	+		MIT1002_02847	0.49	-0.2
3,158,416	+		MIT1002_02847	0.50	-0.9
3,158,422	-		MIT1002_02847	0.50	+1.5
3,158,443	+		MIT1002_02847	0.52	-0.3
3,158,494	-		MIT1002_02847	0.56	+0.7
3,158,511	-		MIT1002_02847	0.57	+1.1
3,158,543	+		MIT1002_02847	0.60	+0.5
3,158,543	+		MIT1002_02847	0.60	-0.7
3,158,543	+		MIT1002_02847	0.60	+0.7
3,158,543	+		MIT1002_02847	0.60	-0.3
3,158,543	+		MIT1002_02847	0.60	+0.7
3,158,543	+		MIT1002_02847	0.60	+0.2
3,158,543	+		MIT1002_02847	0.60	+1.0
3,158,543	+		MIT1002_02847	0.60	+0.7
3,158,543	+		MIT1002_02847	0.60	+1.8
3,158,543	+		MIT1002_02847	0.60	+0.3
3,158,551	-		MIT1002_02847	0.61	-0.8
3,158,551	-		MIT1002_02847	0.61	+0.6
3,158,551	-		MIT1002_02847	0.61	+0.7
3,158,551	-		MIT1002_02847	0.61	+1.6
3,158,551	-		MIT1002_02847	0.61	-2.0
3,158,551	-		MIT1002_02847	0.61	+0.3
3,158,551	-		MIT1002_02847	0.61	+0.5
3,158,551	-		MIT1002_02847	0.61	+0.1
3,158,551	-		MIT1002_02847	0.61	+0.0
3,158,598	-		MIT1002_02847	0.65	-0.0
3,158,673	-		MIT1002_02847	0.71	-0.5
3,158,689	+		MIT1002_02847	0.72	+0.5
3,158,689	+		MIT1002_02847	0.72	+1.7
3,158,689	+		MIT1002_02847	0.72	+1.7
3,158,689	+		MIT1002_02847	0.72	+1.5
3,158,689	+		MIT1002_02847	0.72	-1.3
3,158,697	-		MIT1002_02847	0.73	-1.5
3,158,697	-		MIT1002_02847	0.73	-0.4
3,158,697	-		MIT1002_02847	0.73	-1.0
3,158,714	+		MIT1002_02847	0.74	-0.8
3,158,770	-		MIT1002_02847	0.79	-0.8
3,158,828	+		MIT1002_02847	0.84	+0.1
3,158,836	-		MIT1002_02847	0.84	+3.7
3,158,927	-				-0.3
3,158,986	-				+1.4
3,159,122	-				+0.6
3,159,150	+				+0.1
3,159,227	+				+0.3
3,159,234	-				+2.5
3,159,244	-				+0.7
3,159,284	+				-1.8
3,159,284	+				+0.2
3,159,284	+				+1.0
3,159,284	+				+0.1
3,159,292	-				+0.4
3,159,294	+				+1.8
3,159,299	+				+0.2
3,159,302	-				+1.5
3,159,302	-				-0.6
3,159,313	-				-1.2
3,159,349	+				-1.1
3,159,482	+		MIT1002_02848	0.11	-0.1
3,159,497	+		MIT1002_02848	0.11	+0.8
3,159,497	+		MIT1002_02848	0.11	-0.4
3,159,505	-		MIT1002_02848	0.11	+0.9
3,159,516	+		MIT1002_02848	0.12	-0.2
3,159,518	+		MIT1002_02848	0.12	-0.7
3,159,551	+		MIT1002_02848	0.13	+0.4
3,159,666	+		MIT1002_02848	0.18	-0.7
3,159,666	+		MIT1002_02848	0.18	-0.7
3,159,687	-		MIT1002_02848	0.19	-0.2
3,159,741	+		MIT1002_02848	0.21	+0.4
3,159,741	+		MIT1002_02848	0.21	+0.3
3,159,749	-		MIT1002_02848	0.21	-0.3
3,159,821	+		MIT1002_02848	0.24	-1.3
3,159,846	-		MIT1002_02848	0.25	+0.2
3,159,947	-		MIT1002_02848	0.29	+0.7
3,159,999	-		MIT1002_02848	0.31	-1.8
3,160,006	+		MIT1002_02848	0.31	-0.8
3,160,049	+		MIT1002_02848	0.33	+1.8
3,160,083	+		MIT1002_02848	0.34	+0.9
3,160,122	-		MIT1002_02848	0.36	+0.8
3,160,254	+		MIT1002_02848	0.41	+0.5
3,160,521	-		MIT1002_02848	0.51	+0.5
3,160,547	-		MIT1002_02848	0.52	-0.0
3,160,635	+		MIT1002_02848	0.56	-1.4
3,160,635	+		MIT1002_02848	0.56	+0.1
3,160,918	-		MIT1002_02848	0.67	-1.0
3,160,918	-		MIT1002_02848	0.67	+0.9
3,160,920	-		MIT1002_02848	0.67	+0.2
3,160,925	-		MIT1002_02848	0.67	-0.8
3,161,046	-		MIT1002_02848	0.72	-0.6
3,161,077	-		MIT1002_02848	0.73	-0.0
3,161,095	-		MIT1002_02848	0.74	+0.0
3,161,095	-		MIT1002_02848	0.74	+0.6
3,161,197	+		MIT1002_02848	0.78	+1.7
3,161,197	+		MIT1002_02848	0.78	+0.4
3,161,197	+		MIT1002_02848	0.78	+1.4
3,161,205	-		MIT1002_02848	0.78	+1.1
3,161,205	-		MIT1002_02848	0.78	-0.3
3,161,247	-		MIT1002_02848	0.80	-0.3
3,161,291	-		MIT1002_02848	0.82	+0.5
3,161,292	+		MIT1002_02848	0.82	-0.1
3,161,326	-		MIT1002_02848	0.83	-0.3
3,161,384	+		MIT1002_02848	0.85	+0.0
3,161,528	-				+0.3
3,161,618	+				-0.3
3,161,652	+				+0.1
3,161,667	+				+0.1
3,161,785	-				+0.1
3,161,802	+				-0.1
3,161,995	+		MIT1002_02849	0.29	+0.0
3,161,995	+		MIT1002_02849	0.29	+1.2
3,162,044	+		MIT1002_02849	0.34	+0.3
3,162,081	+		MIT1002_02849	0.39	-1.5
3,162,088	+		MIT1002_02849	0.40	+0.5
3,162,093	+		MIT1002_02849	0.40	+0.9
3,162,093	+		MIT1002_02849	0.40	+1.7
3,162,093	+		MIT1002_02849	0.40	+1.9
3,162,096	-		MIT1002_02849	0.40	-1.9
3,162,096	-		MIT1002_02849	0.40	+0.4
3,162,101	-		MIT1002_02849	0.41	+0.1
3,162,101	-		MIT1002_02849	0.41	+0.5
3,162,116	+		MIT1002_02849	0.43	-0.6
3,162,151	+		MIT1002_02849	0.47	+0.7
3,162,156	+		MIT1002_02849	0.47	-0.5
3,162,159	-		MIT1002_02849	0.48	+0.6
3,162,167	+		MIT1002_02849	0.49	+0.4
3,162,238	+		MIT1002_02849	0.57	-1.3
3,162,284	+		MIT1002_02849	0.62	+0.8
3,162,320	-		MIT1002_02849	0.67	-1.0
3,162,320	-		MIT1002_02849	0.67	+0.6
3,162,328	+		MIT1002_02849	0.67	-0.4
3,162,360	-		MIT1002_02849	0.71	-0.4
3,162,399	+		MIT1002_02849	0.76	-0.6
3,162,399	+		MIT1002_02849	0.76	+0.5
3,162,425	+		MIT1002_02849	0.79	-0.8
3,162,425	+		MIT1002_02849	0.79	-1.9
3,162,471	+		MIT1002_02849	0.84	+0.8
3,162,494	+		MIT1002_02849	0.87	-1.4
3,162,561	-				-0.1
3,162,566	-				-1.0
3,162,568	-				+0.1