Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02828

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,132,624	+		MIT1002_02827	0.34	-1.7
3,132,673	-		MIT1002_02827	0.38	-0.9
3,132,673	-		MIT1002_02827	0.38	+0.3
3,132,679	-		MIT1002_02827	0.38	-1.6
3,132,745	+		MIT1002_02827	0.43	+0.5
3,132,745	+		MIT1002_02827	0.43	+0.2
3,132,745	+		MIT1002_02827	0.43	-0.4
3,132,753	-		MIT1002_02827	0.43	-0.5
3,132,753	-		MIT1002_02827	0.43	+1.2
3,132,824	-		MIT1002_02827	0.49	-1.0
3,132,824	-		MIT1002_02827	0.49	-0.4
3,132,930	+		MIT1002_02827	0.56	+0.4
3,132,930	+		MIT1002_02827	0.56	-0.4
3,132,938	-		MIT1002_02827	0.57	-1.5
3,132,938	-		MIT1002_02827	0.57	+1.4
3,132,938	-		MIT1002_02827	0.57	+0.2
3,132,938	-		MIT1002_02827	0.57	+0.9
3,133,051	+		MIT1002_02827	0.65	-1.2
3,133,059	-		MIT1002_02827	0.66	-0.7
3,133,081	-		MIT1002_02827	0.67	-0.2
3,133,117	+		MIT1002_02827	0.70	-0.0
3,133,125	-		MIT1002_02827	0.71	-1.7
3,133,135	+		MIT1002_02827	0.71	-1.2
3,133,231	-		MIT1002_02827	0.78	+0.4
3,133,358	+		MIT1002_02827	0.88	+1.2
3,133,366	-		MIT1002_02827	0.88	+0.5
3,133,400	+				+1.2
3,133,400	+				-1.5
3,133,463	-				-1.2
3,133,501	-				-1.6
3,133,521	+				-0.2
3,133,529	-				+0.5
3,133,641	+				+1.3
3,133,641	+				-1.8
3,133,649	-				+0.6
3,133,754	-		MIT1002_02828	0.20	-1.0
3,133,811	+		MIT1002_02828	0.27	-0.3
3,133,883	+		MIT1002_02828	0.34	+0.2
3,134,024	+		MIT1002_02828	0.50	-0.6
3,134,034	+		MIT1002_02828	0.51	-0.4
3,134,063	-		MIT1002_02828	0.54	+0.0
3,134,094	-		MIT1002_02828	0.57	-0.8
3,134,094	-		MIT1002_02828	0.57	+0.5
3,134,186	+		MIT1002_02828	0.67	+0.8
3,134,194	-		MIT1002_02828	0.68	+0.3
3,134,194	-		MIT1002_02828	0.68	-2.5
3,134,216	+		MIT1002_02828	0.71	-0.8
3,134,223	+		MIT1002_02828	0.71	-0.2
3,134,263	-		MIT1002_02828	0.76	-1.7
3,134,272	+		MIT1002_02828	0.77	+0.1
3,134,378	+		MIT1002_02828	0.88	+0.3
3,134,383	+		MIT1002_02828	0.89	+0.2
3,134,386	-		MIT1002_02828	0.89	+1.6
3,134,386	-		MIT1002_02828	0.89	-1.6
3,134,424	+				+0.9
3,134,433	-				+0.8
3,134,509	-				+0.0
3,134,616	+				+0.3
3,134,802	+		MIT1002_02829	0.15	+0.7
3,134,802	+		MIT1002_02829	0.15	-1.1
3,134,824	+		MIT1002_02829	0.17	-0.8
3,134,832	-		MIT1002_02829	0.17	-1.7
3,134,832	-		MIT1002_02829	0.17	+0.9
3,134,893	-		MIT1002_02829	0.21	-2.3
3,134,902	+		MIT1002_02829	0.22	+1.8
3,134,932	-		MIT1002_02829	0.24	-0.4
3,134,932	-		MIT1002_02829	0.24	-2.0
3,135,080	-		MIT1002_02829	0.34	-0.1
3,135,117	+		MIT1002_02829	0.37	-1.0
3,135,272	+		MIT1002_02829	0.47	-1.4
3,135,280	-		MIT1002_02829	0.48	+1.2
3,135,287	+		MIT1002_02829	0.48	-2.2
3,135,336	-		MIT1002_02829	0.51	+0.7
3,135,349	-		MIT1002_02829	0.52	+0.5
3,135,437	-		MIT1002_02829	0.58	+1.2
3,135,483	+		MIT1002_02829	0.61	+2.1