Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02826

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
3,128,273	-				+2.0
3,128,331	-				-0.3
3,128,371	-				+0.5
3,128,390	+				+1.0
3,128,402	+				-1.2
3,128,402	+				+0.3
3,128,429	+				+0.4
3,128,480	-				-1.6
3,128,482	-				+1.0
3,128,495	+				+0.4
3,128,495	+				+1.0
3,128,495	+				-0.6
3,128,495	+				-0.8
3,128,495	+				+0.3
3,128,495	+				+0.2
3,128,495	+				+0.6
3,128,495	+				+1.9
3,128,495	+				+0.2
3,128,497	-				-2.1
3,128,503	-				+1.2
3,128,503	-				+0.9
3,128,503	-				+0.1
3,128,503	-				+1.5
3,128,503	-				+0.0
3,128,503	-				-1.3
3,128,534	-		MIT1002_02825	0.14	-1.2
3,128,539	-		MIT1002_02825	0.15	-0.0
3,128,541	-		MIT1002_02825	0.15	+0.8
3,128,713	-		MIT1002_02825	0.39	+0.8
3,128,738	+		MIT1002_02825	0.42	+0.7
3,128,738	+		MIT1002_02825	0.42	+2.2
3,128,746	-		MIT1002_02825	0.43	+0.4
3,128,759	-		MIT1002_02825	0.45	-0.8
3,128,784	-		MIT1002_02825	0.48	-0.4
3,128,799	-		MIT1002_02825	0.50	+0.6
3,128,830	+		MIT1002_02825	0.55	+0.3
3,128,881	-		MIT1002_02825	0.62	+0.8
3,128,886	-		MIT1002_02825	0.63	-0.1
3,128,928	-		MIT1002_02825	0.68	+0.7
3,128,929	-		MIT1002_02825	0.68	+1.0
3,128,951	+		MIT1002_02825	0.72	-0.3
3,128,959	-		MIT1002_02825	0.73	+0.3
3,129,099	-				+0.2
3,129,121	+				+0.3
3,129,238	+				-1.6
3,129,262	-				-0.9
3,129,286	-				-0.1
3,129,291	-				+1.0
3,129,318	+				-0.3
3,129,321	-				+0.5
3,129,329	+				+1.0
3,129,383	+				-1.3
3,129,396	-				-0.3
3,129,400	+				+1.4
3,129,408	-				+1.2
3,129,408	-				-0.9
3,129,413	-				+0.6
3,129,413	-				-0.5
3,129,417	+				+1.5
3,129,439	-				-0.7
3,129,491	-				-0.4
3,129,492	-				-0.5
3,129,517	+				+0.3
3,129,522	+		MIT1002_02826	0.10	-0.9
3,129,525	-		MIT1002_02826	0.10	+0.5
3,129,525	-		MIT1002_02826	0.10	-0.2
3,129,545	+		MIT1002_02826	0.11	+1.2
3,129,588	+		MIT1002_02826	0.12	+0.9
3,129,683	+		MIT1002_02826	0.15	-3.0
3,129,781	-		MIT1002_02826	0.19	+0.7
3,129,812	+		MIT1002_02826	0.20	+2.4
3,129,845	+		MIT1002_02826	0.21	+0.5
3,129,865	+		MIT1002_02826	0.22	-3.2
3,129,870	+		MIT1002_02826	0.22	+1.8
3,129,883	-		MIT1002_02826	0.22	+0.9
3,129,920	+		MIT1002_02826	0.24	-1.7
3,129,958	-		MIT1002_02826	0.25	+0.1
3,130,016	+		MIT1002_02826	0.27	-1.2
3,130,062	+		MIT1002_02826	0.28	+0.8
3,130,093	-		MIT1002_02826	0.29	+0.2
3,130,105	-		MIT1002_02826	0.30	-0.8
3,130,189	+		MIT1002_02826	0.33	-0.4
3,130,314	+		MIT1002_02826	0.37	-1.0
3,130,375	+		MIT1002_02826	0.39	-0.6
3,130,386	+		MIT1002_02826	0.39	+0.1
3,130,438	-		MIT1002_02826	0.41	+0.1
3,130,543	-		MIT1002_02826	0.45	+1.2
3,130,558	+		MIT1002_02826	0.45	-0.3
3,130,613	-		MIT1002_02826	0.47	+1.0
3,130,746	+		MIT1002_02826	0.52	+1.9
3,130,762	-		MIT1002_02826	0.52	+1.2
3,130,809	+		MIT1002_02826	0.54	+1.4
3,130,941	-		MIT1002_02826	0.58	+0.3
3,130,941	-		MIT1002_02826	0.58	+0.3
3,130,941	-		MIT1002_02826	0.58	+0.5
3,130,963	-		MIT1002_02826	0.59	+0.0
3,131,030	+		MIT1002_02826	0.61	-2.3
3,131,030	+		MIT1002_02826	0.61	-2.4
3,131,207	+		MIT1002_02826	0.67	+1.0
3,131,207	+		MIT1002_02826	0.67	+3.2
3,131,207	+		MIT1002_02826	0.67	+2.0
3,131,207	+		MIT1002_02826	0.67	-0.8
3,131,210	+		MIT1002_02826	0.67	-0.3
3,131,215	-		MIT1002_02826	0.68	-0.8
3,131,215	-		MIT1002_02826	0.68	-0.8
3,131,502	-		MIT1002_02826	0.77	+0.1
3,131,588	-		MIT1002_02826	0.80	-1.1
3,131,601	-		MIT1002_02826	0.81	+0.2
3,131,601	-		MIT1002_02826	0.81	-0.8
3,131,615	-		MIT1002_02826	0.81	+0.2
3,131,688	+		MIT1002_02826	0.84	-1.1
3,131,694	+		MIT1002_02826	0.84	+0.3
3,131,717	-		MIT1002_02826	0.85	-1.0
3,131,729	+		MIT1002_02826	0.85	+2.2
3,131,729	+		MIT1002_02826	0.85	+1.0
3,131,745	-		MIT1002_02826	0.86	-1.1
3,131,745	-		MIT1002_02826	0.86	-1.1
3,131,841	+		MIT1002_02826	0.89	-0.2
3,131,841	+		MIT1002_02826	0.89	+0.6
3,131,849	-		MIT1002_02826	0.89	+1.1
3,131,849	-		MIT1002_02826	0.89	-1.2
3,131,878	+				+0.9
3,131,884	+				+0.8
3,131,884	+				+1.3
3,131,886	-				-0.7
3,131,990	-				+0.4
3,132,033	-				+0.3
3,132,070	-				+1.1
3,132,104	+				+0.5
3,132,112	-				+0.3
3,132,325	+		MIT1002_02827	0.12	+0.1
3,132,361	+		MIT1002_02827	0.15	-0.1
3,132,361	+		MIT1002_02827	0.15	+0.2
3,132,369	-		MIT1002_02827	0.15	+0.2
3,132,389	+		MIT1002_02827	0.17	+1.5
3,132,526	+		MIT1002_02827	0.27	-0.0
3,132,526	+		MIT1002_02827	0.27	+0.8
3,132,533	+		MIT1002_02827	0.27	+0.9
3,132,534	-		MIT1002_02827	0.27	-1.7
3,132,551	+		MIT1002_02827	0.29	-0.3
3,132,624	+		MIT1002_02827	0.34	-1.7
3,132,673	-		MIT1002_02827	0.38	-0.9
3,132,673	-		MIT1002_02827	0.38	+0.3
3,132,679	-		MIT1002_02827	0.38	-1.6
3,132,745	+		MIT1002_02827	0.43	+0.5
3,132,745	+		MIT1002_02827	0.43	+0.2
3,132,745	+		MIT1002_02827	0.43	-0.4
3,132,753	-		MIT1002_02827	0.43	-0.5
3,132,753	-		MIT1002_02827	0.43	+1.2
3,132,824	-		MIT1002_02827	0.49	-1.0
3,132,824	-		MIT1002_02827	0.49	-0.4
3,132,930	+		MIT1002_02827	0.56	+0.4
3,132,930	+		MIT1002_02827	0.56	-0.4
3,132,938	-		MIT1002_02827	0.57	-1.5
3,132,938	-		MIT1002_02827	0.57	+1.4
3,132,938	-		MIT1002_02827	0.57	+0.2
3,132,938	-		MIT1002_02827	0.57	+0.9
3,133,051	+		MIT1002_02827	0.65	-1.2
3,133,059	-		MIT1002_02827	0.66	-0.7
3,133,081	-		MIT1002_02827	0.67	-0.2
3,133,117	+		MIT1002_02827	0.70	-0.0
3,133,125	-		MIT1002_02827	0.71	-1.7
3,133,135	+		MIT1002_02827	0.71	-1.2