Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02578

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
2,877,348	-		MIT1002_02576	0.71	-0.5
2,877,401	-		MIT1002_02576	0.78	+0.8
2,877,406	-		MIT1002_02576	0.79	-0.2
2,877,442	+		MIT1002_02576	0.84	+0.3
2,877,500	+				-0.9
2,877,716	+				+0.2
2,877,718	+				-1.3
2,878,001	-		MIT1002_02577	0.71	-1.3
2,878,001	-		MIT1002_02577	0.71	-2.0
2,878,110	-				+1.0
2,878,131	-				-1.8
2,878,221	+				-0.6
2,878,272	+				-0.1
2,878,284	+				+0.4
2,878,328	+				+0.2
2,878,336	-				-0.4
2,878,351	-				-0.0
2,878,365	+				+0.5
2,878,368	-				+0.1
2,878,368	-				-0.2
2,878,375	+				+0.1
2,878,387	+				-0.4
2,878,458	+				+0.4
2,878,466	+				-1.2
2,878,481	+				+0.1
2,878,505	-		MIT1002_02578	0.10	-1.1
2,878,576	+		MIT1002_02578	0.14	-0.2
2,878,674	-		MIT1002_02578	0.18	+1.1
2,878,682	+		MIT1002_02578	0.18	-0.7
2,878,762	-		MIT1002_02578	0.22	+0.1
2,878,840	+		MIT1002_02578	0.26	+0.6
2,878,849	-		MIT1002_02578	0.26	+0.5
2,878,863	+		MIT1002_02578	0.27	-1.3
2,878,863	+		MIT1002_02578	0.27	-1.8
2,878,863	+		MIT1002_02578	0.27	+1.5
2,878,871	-		MIT1002_02578	0.27	-0.5
2,878,873	+		MIT1002_02578	0.27	-0.1
2,878,951	+		MIT1002_02578	0.31	-0.7
2,878,964	+		MIT1002_02578	0.31	-0.8
2,878,972	-		MIT1002_02578	0.32	-1.3
2,879,082	+		MIT1002_02578	0.37	-0.7
2,879,090	-		MIT1002_02578	0.37	+2.4
2,879,096	+		MIT1002_02578	0.37	+1.3
2,879,200	+		MIT1002_02578	0.42	+1.3
2,879,316	-		MIT1002_02578	0.48	-0.3
2,879,316	-		MIT1002_02578	0.48	+1.5
2,879,321	-		MIT1002_02578	0.48	-1.4
2,879,342	+		MIT1002_02578	0.49	+0.4
2,879,384	+		MIT1002_02578	0.51	+1.1
2,879,436	+		MIT1002_02578	0.53	+1.7
2,879,436	+		MIT1002_02578	0.53	+0.5
2,879,444	-		MIT1002_02578	0.53	-0.2
2,879,446	+		MIT1002_02578	0.53	-1.5
2,879,454	-		MIT1002_02578	0.54	-1.5
2,879,517	+		MIT1002_02578	0.57	+1.8
2,879,528	-		MIT1002_02578	0.57	-0.4
2,879,528	-		MIT1002_02578	0.57	+0.0
2,879,530	-		MIT1002_02578	0.57	+0.6
2,879,572	-		MIT1002_02578	0.59	+0.8
2,879,613	+		MIT1002_02578	0.61	-0.1
2,879,623	+		MIT1002_02578	0.62	-1.5
2,879,625	+		MIT1002_02578	0.62	-0.1
2,879,639	+		MIT1002_02578	0.62	-0.1
2,879,788	+		MIT1002_02578	0.69	-0.6
2,879,788	+		MIT1002_02578	0.69	+0.9
2,879,846	+		MIT1002_02578	0.72	+1.0
2,879,854	+		MIT1002_02578	0.72	+1.0
2,879,856	+		MIT1002_02578	0.72	+0.6
2,879,856	+		MIT1002_02578	0.72	+0.4
2,879,878	+		MIT1002_02578	0.73	+0.2
2,879,878	+		MIT1002_02578	0.73	-1.9
2,879,878	+		MIT1002_02578	0.73	+0.6
2,879,878	+		MIT1002_02578	0.73	-1.7
2,879,878	+		MIT1002_02578	0.73	+0.0
2,879,886	-		MIT1002_02578	0.74	-1.7
2,879,886	-		MIT1002_02578	0.74	-3.1
2,879,886	-		MIT1002_02578	0.74	-0.1
2,879,886	-		MIT1002_02578	0.74	+1.0
2,879,886	-		MIT1002_02578	0.74	-0.2
2,879,886	-		MIT1002_02578	0.74	+0.4
2,879,886	-		MIT1002_02578	0.74	-0.5
2,879,886	-		MIT1002_02578	0.74	+1.5
2,879,886	-		MIT1002_02578	0.74	+1.0
2,879,906	-		MIT1002_02578	0.75	+0.6
2,879,929	-		MIT1002_02578	0.76	-1.5
2,880,008	+		MIT1002_02578	0.79	+1.3
2,880,174	+		MIT1002_02578	0.87	-0.0
2,880,182	-		MIT1002_02578	0.87	-1.4
2,880,182	-		MIT1002_02578	0.87	-0.2
2,880,211	+		MIT1002_02578	0.89	+0.6
2,880,275	+				-1.4
2,880,356	+				-0.9
2,880,516	-				+0.5
2,880,635	+				-1.1
2,880,752	+				-0.6
2,880,804	+				-0.9
2,880,809	+				+0.3
2,880,809	+				-0.2