Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01592

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 6
1,752,893	+		MIT1002_01591	0.40	+0.2
1,752,922	+		MIT1002_01591	0.43	-1.5
1,752,922	+		MIT1002_01591	0.43	-0.5
1,752,922	+		MIT1002_01591	0.43	+1.3
1,752,928	-		MIT1002_01591	0.43	-0.1
1,752,932	+		MIT1002_01591	0.43	+0.9
1,752,940	-		MIT1002_01591	0.44	+0.3
1,752,940	-		MIT1002_01591	0.44	+0.7
1,752,940	-		MIT1002_01591	0.44	-0.0
1,753,000	-		MIT1002_01591	0.49	-1.9
1,753,044	-		MIT1002_01591	0.52	+2.1
1,753,049	-		MIT1002_01591	0.53	-0.9
1,753,053	+		MIT1002_01591	0.53	+1.5
1,753,061	-		MIT1002_01591	0.54	-0.9
1,753,140	-		MIT1002_01591	0.60	+0.5
1,753,231	-		MIT1002_01591	0.67	+0.6
1,753,305	-		MIT1002_01591	0.73	-2.0
1,753,378	-		MIT1002_01591	0.79	-0.2
1,753,485	+		MIT1002_01591	0.87	-0.5
1,753,494	-		MIT1002_01591	0.88	-1.6
1,753,544	-				-0.6
1,753,554	-				-0.0
1,753,557	+				+0.5
1,753,557	+				+0.1
1,753,557	+				+0.7
1,753,557	+				+0.2
1,753,557	+				-0.8
1,753,565	-				-0.0
1,753,565	-				-0.5
1,753,575	-				-0.8
1,753,599	-				+0.0
1,753,656	+				-0.1
1,753,656	+				-0.4
1,753,656	+				-0.2
1,753,656	+				-0.5
1,753,664	-				+0.2
1,753,664	-				-1.9
1,753,688	+				-0.5
1,753,688	+				-0.4
1,753,696	-				-0.6
1,753,719	-				+1.9
1,753,753	-				+0.7
1,753,755	-				-0.7
1,753,794	+		MIT1002_01592	0.13	-0.5
1,753,833	-		MIT1002_01592	0.16	+0.4
1,753,861	+		MIT1002_01592	0.18	+1.1
1,753,912	-		MIT1002_01592	0.22	+1.2
1,753,952	+		MIT1002_01592	0.25	-0.7
1,753,961	-		MIT1002_01592	0.26	-0.9
1,753,975	-		MIT1002_01592	0.27	-1.1
1,754,001	+		MIT1002_01592	0.29	-2.1
1,754,024	+		MIT1002_01592	0.31	-0.4
1,754,024	+		MIT1002_01592	0.31	-1.2
1,754,032	-		MIT1002_01592	0.31	-2.8
1,754,064	+		MIT1002_01592	0.34	-0.7
1,754,067	+		MIT1002_01592	0.34	-0.1
1,754,067	+		MIT1002_01592	0.34	-0.7
1,754,286	+		MIT1002_01592	0.51	-0.4
1,754,289	-		MIT1002_01592	0.52	+1.5
1,754,291	-		MIT1002_01592	0.52	-0.5
1,754,305	+		MIT1002_01592	0.53	-1.4
1,754,307	-		MIT1002_01592	0.53	-0.1
1,754,311	-		MIT1002_01592	0.53	-0.4
1,754,458	-		MIT1002_01592	0.65	-0.4
1,754,511	+		MIT1002_01592	0.69	+0.2
1,754,514	-		MIT1002_01592	0.69	-0.8
1,754,514	-		MIT1002_01592	0.69	+0.7
1,754,519	-		MIT1002_01592	0.70	-0.1
1,754,519	-		MIT1002_01592	0.70	+1.4
1,754,536	+		MIT1002_01592	0.71	-1.5
1,754,536	+		MIT1002_01592	0.71	-0.5
1,754,536	+		MIT1002_01592	0.71	+0.3
1,754,590	+		MIT1002_01592	0.75	-0.8
1,754,640	-		MIT1002_01592	0.79	-0.1
1,754,645	+		MIT1002_01592	0.80	-1.2
1,754,645	+		MIT1002_01592	0.80	-1.3
1,754,774	-		MIT1002_01592	0.90	+0.1
1,754,799	+				-0.7
1,754,900	+				-1.5
1,754,908	-				+0.3
1,754,945	-				-0.5
1,754,955	-				-0.9
1,754,960	-				-0.5
1,755,047	-		MIT1002_01593	0.16	-1.0
1,755,052	-		MIT1002_01593	0.17	-1.9
1,755,086	-		MIT1002_01593	0.21	-0.9
1,755,086	-		MIT1002_01593	0.21	-0.5
1,755,172	+		MIT1002_01593	0.32	-0.4
1,755,191	+		MIT1002_01593	0.34	-1.7
1,755,233	-		MIT1002_01593	0.39	-0.3
1,755,259	-		MIT1002_01593	0.42	-0.7
1,755,259	-		MIT1002_01593	0.42	-0.7
1,755,303	+		MIT1002_01593	0.48	-0.5
1,755,303	+		MIT1002_01593	0.48	-0.5
1,755,303	+		MIT1002_01593	0.48	-1.4
1,755,311	-		MIT1002_01593	0.49	-0.7
1,755,313	+		MIT1002_01593	0.49	-0.1
1,755,321	-		MIT1002_01593	0.50	-1.9
1,755,321	-		MIT1002_01593	0.50	-1.3
1,755,363	+		MIT1002_01593	0.55	-1.1
1,755,371	-		MIT1002_01593	0.56	+1.1
1,755,373	+		MIT1002_01593	0.56	-2.9
1,755,381	-		MIT1002_01593	0.57	+1.1
1,755,455	+		MIT1002_01593	0.66	-0.7
1,755,471	-		MIT1002_01593	0.68	-2.4
1,755,490	+		MIT1002_01593	0.70	-1.2
1,755,492	-		MIT1002_01593	0.71	+0.6
1,755,492	-		MIT1002_01593	0.71	-1.9
1,755,503	-		MIT1002_01593	0.72	-0.7
1,755,509	+		MIT1002_01593	0.73	-0.9
1,755,517	-		MIT1002_01593	0.74	+0.5
1,755,559	+		MIT1002_01593	0.79	-1.0
1,755,745	+				+0.6
1,755,791	-				-0.1
1,755,791	-				+0.9
1,755,820	-				-0.7
1,755,820	-				+0.1
1,755,843	-				+2.5